Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is yebQ [C]

Identifier: 213691468

GI number: 213691468

Start: 639734

End: 641500

Strand: Direct

Name: yebQ [C]

Synonym: Blon_0564

Alternate gene names: 213691468

Gene position: 639734-641500 (Clockwise)

Preceding gene: 213691466

Following gene: 213691469

Centisome position: 22.58

GC content: 65.03

Gene sequence:

>1767_bases
ATGGACTGTTCATCACGATCCCAACGTCAGACTCAAGTCGATGCGTCCCCGACATCCCCGACATCTTCAACAACTATGAC
ATCTTCAACGAATCCGACGGCCTCGTCGCCGCTGCCCACCCAGGCGCCGCCGTGGGGCGCGCTGTGGGTGATGGCCCTGG
GATTGGCCATGATCGTGCTCGACAGCTCGATCGTCAACGTCTCCATCCCCACCATCATCGATGATATCGGCATTAACCTG
ACCGACGCCCAGTGGGTCACCTCGCTCTACAACATCGTGCTTGCCGCGTTGTTGCTGCCTTTCGGCAAGTTGGGCGACGC
CAGAGGGCGCAAACTGGTGTTTCAAGTCGGTACCGTGATCTTCGTGGCGAGTTCGACGCTCGCCGCCGCCTCGCAGGGTG
CGGTGATGCTGCTTGCCGCCCGTGTGCTGCAGGGCATCGGAGGCGCGATGATCATGCCGAACACCCTGTCCACGGTGTCC
GCCCTGTTCCGGGGCAAATACCGTGCCGCGGCGTTCGGCGTCTGGGGCGCGGTGATGAGTTCGGCCGCCGCGCTTGGTCC
GCTGCTCGGTGGCGTGTTCACCGAGACCTTGGGATGGCGTTGGATCTTCCTGGTGAACCTGCCGCTGGGCATCGCGGTCT
TTGTATCGGCCATCTTCCTGGTGCCGAAGACCGGTGGGAACGCCTCGGTCGCCGGTGCCGCGGATGCCGCGCAGGATGCC
CGATCCCGTCGCGTCGGTGTGGATATCCCGGGCGTGGTGTTGTCTGCCCTGACCTCGGCCCTGTTGGTGTTCGGTCTTAT
CGAAGGCGAGACCTACGGTTGGTGGAAGCAGACCTCCACGCAGTTGAAGCTCGGCGGGTTGAGCTGGAATCGTGACTGGT
TGTCGCCGGTGCCGATCTGCCTGATCGCCGGCGCGCTTCTGATGGCCGTCTTCATCCTCTTCGAATCCGCGCGGGGCAAA
GCCGGTCGGCCGGTCATGCTGGACATGACCCTGTTCCGCATCAAGACGTTCTCGTGGGGCAATCTGGCGGCCGCGGCCAT
CGCCGCCGGCGAGTTCGCGCTGGTGTTCATGCTGCCGTTGTATCTCATCAACGCCCGCGGGCTCAACACGCTGCAGGCCG
GTGCGATGCTGGCCGTGATGGGCTTGGGGTCCATCGTCGCAGGTGCGCAGGCCCATGTCATGGCCGCCAGGCTCACCCCG
GCCGGCGTGATTCAACTTGGTCTTGTGATCGAGATCATCGCCGTCGCCCTGGTCGCGGTCCTTATGCCTGTGGGGTTCTC
TGTGTGGTGGCAGCTTGTTCCCATGGCCGCGTACGGTCTGGGTCTGGGCTTCGCCTCCGCGCAGCTGACCAGCGTGGTGC
TCTCCGAAGTACCGGTCATGCAGTCCGGCGAAGGGTCGGCCACCCAGTCCACGGTTCGACAGCTCGGCACCGCCGTCGGT
TCGGCCATCTCCGGCGCGTCGTTGGCCATGGCCGTCAACGGAACATTGCCGGCGCGGCTCGAATCCCTCGGGCTGCCCGC
CAAGGTCGGCGACGGTCTGGCCCAAGCGGTCAGTGGTTCGGCGGGTGGAGTGATCGGCGTGTTCCGCAGCGGTGATGGAC
CGGCGGCCCGATTCGGCGACGAGGCGCCGAAGATTGCCGATGCGATGACTTCAGGGTTCGTCGAAGGCGGCCAGTGGACG
CTTCTGGTCGCCGGCATCATGCTGTTCATCGGTTTGCTGGCCTCGGTGGCCGTGCGTCGTGCCGCGTCGTCGCACAACGT
GCGTTGA

Upstream 100 bases:

>100_bases
GTTCCTTGATATCCAGTGAGACGGTCCGCGCCACGGATGTACTGTGAACGGCGGATAAGCGCATCAGGCGCCTCGATCAT
GGCAGAGAGGAAACCCCGTT

Downstream 100 bases:

>100_bases
CGCATGACGGCTACGGTCTTATGGGGAGTGCGGCCGTGCGCGGTCGAACGGTGTGGCCCGCATACCGTCCACCGCGCCTG
CGGTCGGTTTGCCATCCAGA

Product: major facilitator superfamily MFS_1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 588

Protein sequence:

>588_residues
MDCSSRSQRQTQVDASPTSPTSSTTMTSSTNPTASSPLPTQAPPWGALWVMALGLAMIVLDSSIVNVSIPTIIDDIGINL
TDAQWVTSLYNIVLAALLLPFGKLGDARGRKLVFQVGTVIFVASSTLAAASQGAVMLLAARVLQGIGGAMIMPNTLSTVS
ALFRGKYRAAAFGVWGAVMSSAAALGPLLGGVFTETLGWRWIFLVNLPLGIAVFVSAIFLVPKTGGNASVAGAADAAQDA
RSRRVGVDIPGVVLSALTSALLVFGLIEGETYGWWKQTSTQLKLGGLSWNRDWLSPVPICLIAGALLMAVFILFESARGK
AGRPVMLDMTLFRIKTFSWGNLAAAAIAAGEFALVFMLPLYLINARGLNTLQAGAMLAVMGLGSIVAGAQAHVMAARLTP
AGVIQLGLVIEIIAVALVAVLMPVGFSVWWQLVPMAAYGLGLGFASAQLTSVVLSEVPVMQSGEGSATQSTVRQLGTAVG
SAISGASLAMAVNGTLPARLESLGLPAKVGDGLAQAVSGSAGGVIGVFRSGDGPAARFGDEAPKIADAMTSGFVEGGQWT
LLVAGIMLFIGLLASVAVRRAASSHNVR

Sequences:

>Translated_588_residues
MDCSSRSQRQTQVDASPTSPTSSTTMTSSTNPTASSPLPTQAPPWGALWVMALGLAMIVLDSSIVNVSIPTIIDDIGINL
TDAQWVTSLYNIVLAALLLPFGKLGDARGRKLVFQVGTVIFVASSTLAAASQGAVMLLAARVLQGIGGAMIMPNTLSTVS
ALFRGKYRAAAFGVWGAVMSSAAALGPLLGGVFTETLGWRWIFLVNLPLGIAVFVSAIFLVPKTGGNASVAGAADAAQDA
RSRRVGVDIPGVVLSALTSALLVFGLIEGETYGWWKQTSTQLKLGGLSWNRDWLSPVPICLIAGALLMAVFILFESARGK
AGRPVMLDMTLFRIKTFSWGNLAAAAIAAGEFALVFMLPLYLINARGLNTLQAGAMLAVMGLGSIVAGAQAHVMAARLTP
AGVIQLGLVIEIIAVALVAVLMPVGFSVWWQLVPMAAYGLGLGFASAQLTSVVLSEVPVMQSGEGSATQSTVRQLGTAVG
SAISGASLAMAVNGTLPARLESLGLPAKVGDGLAQAVSGSAGGVIGVFRSGDGPAARFGDEAPKIADAMTSGFVEGGQWT
LLVAGIMLFIGLLASVAVRRAASSHNVR
>Mature_588_residues
MDCSSRSQRQTQVDASPTSPTSSTTMTSSTNPTASSPLPTQAPPWGALWVMALGLAMIVLDSSIVNVSIPTIIDDIGINL
TDAQWVTSLYNIVLAALLLPFGKLGDARGRKLVFQVGTVIFVASSTLAAASQGAVMLLAARVLQGIGGAMIMPNTLSTVS
ALFRGKYRAAAFGVWGAVMSSAAALGPLLGGVFTETLGWRWIFLVNLPLGIAVFVSAIFLVPKTGGNASVAGAADAAQDA
RSRRVGVDIPGVVLSALTSALLVFGLIEGETYGWWKQTSTQLKLGGLSWNRDWLSPVPICLIAGALLMAVFILFESARGK
AGRPVMLDMTLFRIKTFSWGNLAAAAIAAGEFALVFMLPLYLINARGLNTLQAGAMLAVMGLGSIVAGAQAHVMAARLTP
AGVIQLGLVIEIIAVALVAVLMPVGFSVWWQLVPMAAYGLGLGFASAQLTSVVLSEVPVMQSGEGSATQSTVRQLGTAVG
SAISGASLAMAVNGTLPARLESLGLPAKVGDGLAQAVSGSAGGVIGVFRSGDGPAARFGDEAPKIADAMTSGFVEGGQWT
LLVAGIMLFIGLLASVAVRRAASSHNVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. EmrB family [H]

Homologues:

Organism=Escherichia coli, GI87081983, Length=452, Percent_Identity=27.212389380531, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI1790195, Length=450, Percent_Identity=26.8888888888889, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1788392, Length=449, Percent_Identity=26.7260579064588, Blast_Score=102, Evalue=9e-23,
Organism=Escherichia coli, GI1789042, Length=494, Percent_Identity=23.8866396761134, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI1788710, Length=458, Percent_Identity=22.0524017467249, Blast_Score=92, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6324954, Length=423, Percent_Identity=23.6406619385343, Blast_Score=78, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6325455, Length=152, Percent_Identity=29.6052631578947, Blast_Score=77, Evalue=9e-15,
Organism=Saccharomyces cerevisiae, GI6321663, Length=197, Percent_Identity=28.9340101522843, Blast_Score=74, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6322958, Length=183, Percent_Identity=27.8688524590164, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004638
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 60365; Mature: 60365

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCSSRSQRQTQVDASPTSPTSSTTMTSSTNPTASSPLPTQAPPWGALWVMALGLAMIVL
CCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
DSSIVNVSIPTIIDDIGINLTDAQWVTSLYNIVLAALLLPFGKLGDARGRKLVFQVGTVI
CCCCEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHEEHHHHH
FVASSTLAAASQGAVMLLAARVLQGIGGAMIMPNTLSTVSALFRGKYRAAAFGVWGAVMS
EEECHHHHHHCCCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHH
SAAALGPLLGGVFTETLGWRWIFLVNLPLGIAVFVSAIFLVPKTGGNASVAGAADAAQDA
HHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHH
RSRRVGVDIPGVVLSALTSALLVFGLIEGETYGWWKQTSTQLKLGGLSWNRDWLSPVPIC
HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEECCCCCCCCCCCHHHHH
LIAGALLMAVFILFESARGKAGRPVMLDMTLFRIKTFSWGNLAAAAIAAGEFALVFMLPL
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEHEEHHEECCCCCHHHHHHHHHHHHHHHHHHH
YLINARGLNTLQAGAMLAVMGLGSIVAGAQAHVMAARLTPAGVIQLGLVIEIIAVALVAV
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LMPVGFSVWWQLVPMAAYGLGLGFASAQLTSVVLSEVPVMQSGEGSATQSTVRQLGTAVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
SAISGASLAMAVNGTLPARLESLGLPAKVGDGLAQAVSGSAGGVIGVFRSGDGPAARFGD
HHCCCCEEEEEECCCCHHHHHHCCCCHHHCCHHHHHHCCCCCCEEEEEECCCCCCCCCCC
EAPKIADAMTSGFVEGGQWTLLVAGIMLFIGLLASVAVRRAASSHNVR
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDCSSRSQRQTQVDASPTSPTSSTTMTSSTNPTASSPLPTQAPPWGALWVMALGLAMIVL
CCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
DSSIVNVSIPTIIDDIGINLTDAQWVTSLYNIVLAALLLPFGKLGDARGRKLVFQVGTVI
CCCCEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHEEHHHHH
FVASSTLAAASQGAVMLLAARVLQGIGGAMIMPNTLSTVSALFRGKYRAAAFGVWGAVMS
EEECHHHHHHCCCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHH
SAAALGPLLGGVFTETLGWRWIFLVNLPLGIAVFVSAIFLVPKTGGNASVAGAADAAQDA
HHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHH
RSRRVGVDIPGVVLSALTSALLVFGLIEGETYGWWKQTSTQLKLGGLSWNRDWLSPVPIC
HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEECCCCCCCCCCCHHHHH
LIAGALLMAVFILFESARGKAGRPVMLDMTLFRIKTFSWGNLAAAAIAAGEFALVFMLPL
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEHEEHHEECCCCCHHHHHHHHHHHHHHHHHHH
YLINARGLNTLQAGAMLAVMGLGSIVAGAQAHVMAARLTPAGVIQLGLVIEIIAVALVAV
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LMPVGFSVWWQLVPMAAYGLGLGFASAQLTSVVLSEVPVMQSGEGSATQSTVRQLGTAVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
SAISGASLAMAVNGTLPARLESLGLPAKVGDGLAQAVSGSAGGVIGVFRSGDGPAARFGD
HHCCCCEEEEEECCCCHHHHHHCCCCHHHCCHHHHHHCCCCCCEEEEEECCCCCCCCCCC
EAPKIADAMTSGFVEGGQWTLLVAGIMLFIGLLASVAVRRAASSHNVR
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]