| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is glkA [H]
Identifier: 213691469
GI number: 213691469
Start: 642020
End: 642970
Strand: Direct
Name: glkA [H]
Synonym: Blon_0565
Alternate gene names: 213691469
Gene position: 642020-642970 (Clockwise)
Preceding gene: 213691468
Following gene: 213691470
Centisome position: 22.66
GC content: 64.67
Gene sequence:
>951_bases ATGACCACGCTCGCCATTGATATCGGCGGAACCAAGATCGCCGCTGCCGTCTGCGATGCAAACGACAGCATCATCCAGCG TTGGCGCGTCCCCACGCCGATGGACGCCGACGCCATCAACACGCATATCGCCGAGATCTACCGCGAAGCCGTCGCCGCTG GCCACACCGATATCGAGGCCATCGGCATCTCCGCGGCCGGTAATGTGAGCGCGGATCGCAAGACGCTCACCTTCTCCGCC AACATTCCGGCCTGGATCAATTACAATCTGTCCGAGCATGTCGGCGCGTTGATCGACCATGCCGTTCCGATCGTCGTCGA GAACGATGCCAACTGCGCCGGCTGGGGCGAATTCGTGCACGGTGCCGGCCAAGGCAGCTCCAACATGGTCGCGCTGACCG TGGGCACCGGCCTCGGTGGCGCCATCGTGATCAATGGCCAGCTCTACCGAGGCTCCTTCGGCATGGCCGCAGAGCTCGGC CACCTGCCGATGGTCCCGGACGGAGACCATTGCGGCTGCGGCCTGCGCGGCTGCGCCGAGCGCTATACTTCGGGAACCTC GCTGGAGAACTTCGCCAAGTCCGCCGTGCGTCGTCGTCCTCAGGACGCCAAACGTCTTCTGGAGCTGTGCGGTGGCGACA TCACCAAGCTGGAGGGACCGATGGTGTCCCAAGCGGCTCAGGAGGGTGACGTGCTTGGCCTGTATGCGTTCGGCAAGATC GGCGAATGGCTTGGCCGCACCATGGCCGCCGTTTCCGCCGTGCTTGATCCGGACCTGTTCGTCATCGGCGGTGGTGTGGT AGCCGTTGGAGACATTCTGCTGGAGCCGGCCCGCTACAACTACCAGCGTTTCCTGGAAGGCAGCGCCTACCGTGGCCACG CCAAGATCGTCGCCGCAGTCGCGGGCCAGGACGCCGGCCTCATCGGTGCCGCCAATCTGGCTCTTCGCTGA
Upstream 100 bases:
>100_bases GACGCATGGCGAATCACGGAAAATCCGCGGTGGGAGGTCATGGCGGCTCACTACTATTTTCGCTATCTCGTACGTTACGA AAGTCTTCAAGGAGTAAGCC
Downstream 100 bases:
>100_bases CGCAGATGGCGGTGCGTAGATAACGCGCGCGACGCAGATAGCAACGCGTAAATAATCGCAAATAATCGCAAACAGTACAG TGCGGTGATTCTCGTTATGG
Product: glucokinase, ROK family
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MTTLAIDIGGTKIAAAVCDANDSIIQRWRVPTPMDADAINTHIAEIYREAVAAGHTDIEAIGISAAGNVSADRKTLTFSA NIPAWINYNLSEHVGALIDHAVPIVVENDANCAGWGEFVHGAGQGSSNMVALTVGTGLGGAIVINGQLYRGSFGMAAELG HLPMVPDGDHCGCGLRGCAERYTSGTSLENFAKSAVRRRPQDAKRLLELCGGDITKLEGPMVSQAAQEGDVLGLYAFGKI GEWLGRTMAAVSAVLDPDLFVIGGGVVAVGDILLEPARYNYQRFLEGSAYRGHAKIVAAVAGQDAGLIGAANLALR
Sequences:
>Translated_316_residues MTTLAIDIGGTKIAAAVCDANDSIIQRWRVPTPMDADAINTHIAEIYREAVAAGHTDIEAIGISAAGNVSADRKTLTFSA NIPAWINYNLSEHVGALIDHAVPIVVENDANCAGWGEFVHGAGQGSSNMVALTVGTGLGGAIVINGQLYRGSFGMAAELG HLPMVPDGDHCGCGLRGCAERYTSGTSLENFAKSAVRRRPQDAKRLLELCGGDITKLEGPMVSQAAQEGDVLGLYAFGKI GEWLGRTMAAVSAVLDPDLFVIGGGVVAVGDILLEPARYNYQRFLEGSAYRGHAKIVAAVAGQDAGLIGAANLALR >Mature_315_residues TTLAIDIGGTKIAAAVCDANDSIIQRWRVPTPMDADAINTHIAEIYREAVAAGHTDIEAIGISAAGNVSADRKTLTFSAN IPAWINYNLSEHVGALIDHAVPIVVENDANCAGWGEFVHGAGQGSSNMVALTVGTGLGGAIVINGQLYRGSFGMAAELGH LPMVPDGDHCGCGLRGCAERYTSGTSLENFAKSAVRRRPQDAKRLLELCGGDITKLEGPMVSQAAQEGDVLGLYAFGKIG EWLGRTMAAVSAVLDPDLFVIGGGVVAVGDILLEPARYNYQRFLEGSAYRGHAKIVAAVAGQDAGLIGAANLALR
Specific function: Required for glucose repression of many different genes [H]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI298566315, Length=271, Percent_Identity=30.6273062730627, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI4885285, Length=271, Percent_Identity=30.6273062730627, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI298566325, Length=271, Percent_Identity=30.6273062730627, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI190014632, Length=271, Percent_Identity=30.6273062730627, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI1787363, Length=276, Percent_Identity=27.8985507246377, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI87081733, Length=323, Percent_Identity=30.030959752322, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI87082230, Length=270, Percent_Identity=30.7407407407407, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI1790522, Length=249, Percent_Identity=26.5060240963855, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1786891, Length=223, Percent_Identity=26.0089686098655, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1787878, Length=222, Percent_Identity=25.2252252252252, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 32856; Mature: 32724
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLAIDIGGTKIAAAVCDANDSIIQRWRVPTPMDADAINTHIAEIYREAVAAGHTDIEA CEEEEEEECCCEEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE IGISAAGNVSADRKTLTFSANIPAWINYNLSEHVGALIDHAVPIVVENDANCAGWGEFVH EEEECCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHH GAGQGSSNMVALTVGTGLGGAIVINGQLYRGSFGMAAELGHLPMVPDGDHCGCGLRGCAE CCCCCCCCEEEEEECCCCCCEEEECCEEEECCCCCHHHCCCCCCCCCCCCCCCCHHHHHH RYTSGTSLENFAKSAVRRRPQDAKRLLELCGGDITKLEGPMVSQAAQEGDVLGLYAFGKI HHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEECCCCHHHHHHHCCCEEEEEEHHHH GEWLGRTMAAVSAVLDPDLFVIGGGVVAVGDILLEPARYNYQRFLEGSAYRGHAKIVAAV HHHHHHHHHHHHHHCCCCEEEECCCHHEEHHHHHCCCCCCHHHHHCCCCCCCCEEEEEEE AGQDAGLIGAANLALR CCCCCCEEECCCEECC >Mature Secondary Structure TTLAIDIGGTKIAAAVCDANDSIIQRWRVPTPMDADAINTHIAEIYREAVAAGHTDIEA EEEEEEECCCEEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE IGISAAGNVSADRKTLTFSANIPAWINYNLSEHVGALIDHAVPIVVENDANCAGWGEFVH EEEECCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHH GAGQGSSNMVALTVGTGLGGAIVINGQLYRGSFGMAAELGHLPMVPDGDHCGCGLRGCAE CCCCCCCCEEEEEECCCCCCEEEECCEEEECCCCCHHHCCCCCCCCCCCCCCCCHHHHHH RYTSGTSLENFAKSAVRRRPQDAKRLLELCGGDITKLEGPMVSQAAQEGDVLGLYAFGKI HHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEECCCCHHHHHHHCCCEEEEEEHHHH GEWLGRTMAAVSAVLDPDLFVIGGGVVAVGDILLEPARYNYQRFLEGSAYRGHAKIVAAV HHHHHHHHHHHHHHCCCCEEEECCCHHEEHHHHHCCCCCCHHHHHCCCCCCCCEEEEEEE AGQDAGLIGAANLALR CCCCCCEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1435260; 12000953 [H]