| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is sulD [H]
Identifier: 213691457
GI number: 213691457
Start: 623564
End: 624976
Strand: Direct
Name: sulD [H]
Synonym: Blon_0552
Alternate gene names: 213691457
Gene position: 623564-624976 (Clockwise)
Preceding gene: 213691456
Following gene: 213691458
Centisome position: 22.01
GC content: 59.59
Gene sequence:
>1413_bases ATGGACACCATCACACTTACCGGCGTACATGCCAACGGCACCCACGGTGTGCTCGCCTTCGAACACGAACGGCCACAAAC CTTCGTCGTGGATGTCACCCTGCACCTTGATCTGGCCGCAGCCGGTCAATCCGACGATCTCAACGACACCATCGATTACG GCCGTGTGGCCAAGGACATCACGGCTGTCATCGAAGGCCCTCATGTGGACCTGATCGAGCGTCTGGCCCAACGTATCGCG GACGAGATTCTTGCCGATGCGCCGGCCGTCGCCTCCATCGACGTCACCGTGCACAAGCCTCACGCACCCATCGTCGTGGC TTTTGCAGATGTATCGGTCTCCATCTCGCGCGTGCGTGCCACCGATAATGGACGTACTGCTGAAGAGCATGCCATCCATA ACGCGGTGGTGGCCTTGGGCGGCAATGTGGGCGAGGTGGAATCCACCTTGCGAGCCGCCGTTCGGGAGATTGACGCGTTG CCTGGCACACAGGTGACTGGTATCTCACCGCTTTACCGCACGGCCGCGTGGGGCATGGCCGACGGTACGCCGGATTTCCT GAACGCCGTGGTGGAGCTTGAAACCACAATGGGCAGCCACGAATTGCTTGCCGCGTTGCAAAACATCGAAGCGAACCATG GACGAATTCGTGAGAATCATTGGGATTCCAGGCCGTTGGACTTGGACATTATCGACTTTGATGGCATCACCAGCGCGGAT CCGGATCTGGCATTGCCCCATCCGCGTGCTTGGCAGCGTGCGTTTGTGCTGGCTCCTTGGTTGGCATTGAATCCGAACGC CAAACTCGCCGGAGCCCATGAGGGGCCTGTAGCCGATTTGCTGGCCACCGCGCCGGACCGTAACGCCGTGCAGCTCGAGA GCGAAGACTGGATGCTCGGCGGGCATGCAGTCAAGCAAGAATCCGCGTCGGAGTCGGCACCCGTCTCACGCAAGGCGATT ATTTCGCTGGATTCCACCTCGCAGGATGCCGAACGGCTGTTCCGTGAAACCATCGTTTCCATCGACAGTGTTCCTGGCAA TCAGGTACAGGGCATTTCGCCGCTCTACCATGTCAGCCATTTCGACGGCCCGGACGCGATGAGCGCGGTCATCCAAATCG AAACCAAGTTGCCGCCCGCCGACCTGATTGCCGTATTGGGCAGCATCGAAAGCGTTCATGATCTGGCAGTCGACCTTGAC CTTGTTGACATGGAGGGCGTGACTTCCGACGAGCCCAACTGCAGCATTCCTTGGCCGTCGGCCCGTAACCATGCGTCGGT ATTGGCACCTTGGCTGGATATGGACCCGAATGCTACTCTGGGCGGCGACCCGGTGGCCTTCCTTTTGGCCATGGCACCGG ATGCCGGACAGGTCGGATTGCTATCGGACAACTGGATACTGTCGAACAGTTGA
Upstream 100 bases:
>100_bases GCTCCCTGTTTTGGTTGCTTCTAGGCCTTGGCTCCCCTCGGGCGAGGGGAGCTGGCGCCGAAGGCGACTGAGGGGAGCAT TTGAGCAGAAAGCCTTACCA
Downstream 100 bases:
>100_bases ACTGATGGCAGAACCAGTTACGAACGGTAGGCTAGAAACCAGACGGTGACGGACCGGTATCTGACCTCGAACAGCCGGGC ACGGCAGTGACGAAAACCAA
Product: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase
Products: NA
Alternate protein names: Dihydroneopterin aldolase; DHNA; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; PPPK; 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase; HPPK [H]
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MDTITLTGVHANGTHGVLAFEHERPQTFVVDVTLHLDLAAAGQSDDLNDTIDYGRVAKDITAVIEGPHVDLIERLAQRIA DEILADAPAVASIDVTVHKPHAPIVVAFADVSVSISRVRATDNGRTAEEHAIHNAVVALGGNVGEVESTLRAAVREIDAL PGTQVTGISPLYRTAAWGMADGTPDFLNAVVELETTMGSHELLAALQNIEANHGRIRENHWDSRPLDLDIIDFDGITSAD PDLALPHPRAWQRAFVLAPWLALNPNAKLAGAHEGPVADLLATAPDRNAVQLESEDWMLGGHAVKQESASESAPVSRKAI ISLDSTSQDAERLFRETIVSIDSVPGNQVQGISPLYHVSHFDGPDAMSAVIQIETKLPPADLIAVLGSIESVHDLAVDLD LVDMEGVTSDEPNCSIPWPSARNHASVLAPWLDMDPNATLGGDPVAFLLAMAPDAGQVGLLSDNWILSNS
Sequences:
>Translated_470_residues MDTITLTGVHANGTHGVLAFEHERPQTFVVDVTLHLDLAAAGQSDDLNDTIDYGRVAKDITAVIEGPHVDLIERLAQRIA DEILADAPAVASIDVTVHKPHAPIVVAFADVSVSISRVRATDNGRTAEEHAIHNAVVALGGNVGEVESTLRAAVREIDAL PGTQVTGISPLYRTAAWGMADGTPDFLNAVVELETTMGSHELLAALQNIEANHGRIRENHWDSRPLDLDIIDFDGITSAD PDLALPHPRAWQRAFVLAPWLALNPNAKLAGAHEGPVADLLATAPDRNAVQLESEDWMLGGHAVKQESASESAPVSRKAI ISLDSTSQDAERLFRETIVSIDSVPGNQVQGISPLYHVSHFDGPDAMSAVIQIETKLPPADLIAVLGSIESVHDLAVDLD LVDMEGVTSDEPNCSIPWPSARNHASVLAPWLDMDPNATLGGDPVAFLLAMAPDAGQVGLLSDNWILSNS >Mature_470_residues MDTITLTGVHANGTHGVLAFEHERPQTFVVDVTLHLDLAAAGQSDDLNDTIDYGRVAKDITAVIEGPHVDLIERLAQRIA DEILADAPAVASIDVTVHKPHAPIVVAFADVSVSISRVRATDNGRTAEEHAIHNAVVALGGNVGEVESTLRAAVREIDAL PGTQVTGISPLYRTAAWGMADGTPDFLNAVVELETTMGSHELLAALQNIEANHGRIRENHWDSRPLDLDIIDFDGITSAD PDLALPHPRAWQRAFVLAPWLALNPNAKLAGAHEGPVADLLATAPDRNAVQLESEDWMLGGHAVKQESASESAPVSRKAI ISLDSTSQDAERLFRETIVSIDSVPGNQVQGISPLYHVSHFDGPDAMSAVIQIETKLPPADLIAVLGSIESVHDLAVDLD LVDMEGVTSDEPNCSIPWPSARNHASVLAPWLDMDPNATLGGDPVAFLLAMAPDAGQVGLLSDNWILSNS
Specific function: Dihydrofolate biosynthesis; first step. [C]
COG id: COG0801
COG function: function code H; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the HPPK family [H]
Homologues:
Organism=Escherichia coli, GI1786335, Length=132, Percent_Identity=35.6060606060606, Blast_Score=80, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6324073, Length=242, Percent_Identity=26.8595041322314, Blast_Score=80, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006156 - InterPro: IPR006157 - InterPro: IPR000550 [H]
Pfam domain/function: PF02152 FolB; PF01288 HPPK [H]
EC number: =4.1.2.25; =2.7.6.3 [H]
Molecular weight: Translated: 50011; Mature: 50011
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTITLTGVHANGTHGVLAFEHERPQTFVVDVTLHLDLAAAGQSDDLNDTIDYGRVAKDI CCEEEEEEEECCCCCCEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHH TAVIEGPHVDLIERLAQRIADEILADAPAVASIDVTVHKPHAPIVVAFADVSVSISRVRA HHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEECCEEEEEEEEE TDNGRTAEEHAIHNAVVALGGNVGEVESTLRAAVREIDALPGTQVTGISPLYRTAAWGMA CCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCC DGTPDFLNAVVELETTMGSHELLAALQNIEANHGRIRENHWDSRPLDLDIIDFDGITSAD CCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC PDLALPHPRAWQRAFVLAPWLALNPNAKLAGAHEGPVADLLATAPDRNAVQLESEDWMLG CCCCCCCCHHHHHHEEEECEEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCEEEC GHAVKQESASESAPVSRKAIISLDSTSQDAERLFRETIVSIDSVPGNQVQGISPLYHVSH CHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEECC FDGPDAMSAVIQIETKLPPADLIAVLGSIESVHDLAVDLDLVDMEGVTSDEPNCSIPWPS CCCHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCC ARNHASVLAPWLDMDPNATLGGDPVAFLLAMAPDAGQVGLLSDNWILSNS CCCCCCEEECCCCCCCCCCCCCCHHEEEEEECCCCCCEEEEECCEEEECC >Mature Secondary Structure MDTITLTGVHANGTHGVLAFEHERPQTFVVDVTLHLDLAAAGQSDDLNDTIDYGRVAKDI CCEEEEEEEECCCCCCEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHH TAVIEGPHVDLIERLAQRIADEILADAPAVASIDVTVHKPHAPIVVAFADVSVSISRVRA HHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEECCEEEEEEEEE TDNGRTAEEHAIHNAVVALGGNVGEVESTLRAAVREIDALPGTQVTGISPLYRTAAWGMA CCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCC DGTPDFLNAVVELETTMGSHELLAALQNIEANHGRIRENHWDSRPLDLDIIDFDGITSAD CCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC PDLALPHPRAWQRAFVLAPWLALNPNAKLAGAHEGPVADLLATAPDRNAVQLESEDWMLG CCCCCCCCHHHHHHEEEECEEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCCEEEC GHAVKQESASESAPVSRKAIISLDSTSQDAERLFRETIVSIDSVPGNQVQGISPLYHVSH CHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEECC FDGPDAMSAVIQIETKLPPADLIAVLGSIESVHDLAVDLDLVDMEGVTSDEPNCSIPWPS CCCHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCC ARNHASVLAPWLDMDPNATLGGDPVAFLLAMAPDAGQVGLLSDNWILSNS CCCCCCEEECCCCCCCCCCCCCCHHEEEEEECCCCCCEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2168367; 7798151; 11463916; 8385663 [H]