Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213691458

Identifier: 213691458

GI number: 213691458

Start: 625151

End: 625678

Strand: Direct

Name: 213691458

Synonym: Blon_0553

Alternate gene names: NA

Gene position: 625151-625678 (Clockwise)

Preceding gene: 213691457

Following gene: 213691462

Centisome position: 22.07

GC content: 57.2

Gene sequence:

>528_bases
ATGAAAACACGGCGAACAGCATGGTGGCAGTATATGATCGGTGCCGTGCTGGGCCTGTTGGCGGGTATCGGTCTGGCCTC
CTACGGCGAAAGCTCGGGACTGTCACTGATTGGTGCGCCTCGGATTGTGACCGGATTGCTGGCCGTGCTGGGCGTTATCG
TGCTGATCTTGGCCCTGCAAGTGCATAAATACGCGAATACCGACCCCAAGAAGCGTCCGCATAGCTTCATCAATCCCACT
ATCGCGGTGTATACGCTGGTGCTGTCTAAGGCACTGGGATTGGCGGGCGCAACGCTTGCCGGCTGGTATGGCGGTCAGAT
TGTGATGAGCCTGAGCCATATTGAGGCGGATTTTTATGCACACGCCGTCACCGAGTGCGCAATCGCGGCCGTGGTGTGCA
TCGCCGACATGATCATCGGCATTATCGGCGAATGGTTGTGCCAGCTACCGCCGAACGAAGGCCCCGAAAACCCGAAAATC
AAGGAAGCCAAGCGCCGTAGCGACATAGCCCAGGCCTACAAAAGATAA

Upstream 100 bases:

>100_bases
CCGGGCACGGCAGTGACGAAAACCAAATCAAGATGAGCAGCCCAGGAGCGAGGGCCGTTCGCAAACAGCAAACAGCAACG
CAACGATAAGGAGGCCGGAC

Downstream 100 bases:

>100_bases
TCCGTGATAAGCCCCCTCTGACGAGGGGGCTGTAGGCGTAGCCGACTGGGGGAGAGAAGAAGAAAAAACCACACCATCGG
CCAAGCCGATTCCCACTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKTRRTAWWQYMIGAVLGLLAGIGLASYGESSGLSLIGAPRIVTGLLAVLGVIVLILALQVHKYANTDPKKRPHSFINPT
IAVYTLVLSKALGLAGATLAGWYGGQIVMSLSHIEADFYAHAVTECAIAAVVCIADMIIGIIGEWLCQLPPNEGPENPKI
KEAKRRSDIAQAYKR

Sequences:

>Translated_175_residues
MKTRRTAWWQYMIGAVLGLLAGIGLASYGESSGLSLIGAPRIVTGLLAVLGVIVLILALQVHKYANTDPKKRPHSFINPT
IAVYTLVLSKALGLAGATLAGWYGGQIVMSLSHIEADFYAHAVTECAIAAVVCIADMIIGIIGEWLCQLPPNEGPENPKI
KEAKRRSDIAQAYKR
>Mature_175_residues
MKTRRTAWWQYMIGAVLGLLAGIGLASYGESSGLSLIGAPRIVTGLLAVLGVIVLILALQVHKYANTDPKKRPHSFINPT
IAVYTLVLSKALGLAGATLAGWYGGQIVMSLSHIEADFYAHAVTECAIAAVVCIADMIIGIIGEWLCQLPPNEGPENPKI
KEAKRRSDIAQAYKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18754; Mature: 18754

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRRTAWWQYMIGAVLGLLAGIGLASYGESSGLSLIGAPRIVTGLLAVLGVIVLILALQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHH
VHKYANTDPKKRPHSFINPTIAVYTLVLSKALGLAGATLAGWYGGQIVMSLSHIEADFYA
HHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
HAVTECAIAAVVCIADMIIGIIGEWLCQLPPNEGPENPKIKEAKRRSDIAQAYKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTRRTAWWQYMIGAVLGLLAGIGLASYGESSGLSLIGAPRIVTGLLAVLGVIVLILALQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHH
VHKYANTDPKKRPHSFINPTIAVYTLVLSKALGLAGATLAGWYGGQIVMSLSHIEADFYA
HHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
HAVTECAIAAVVCIADMIIGIIGEWLCQLPPNEGPENPKIKEAKRRSDIAQAYKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA