| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is tilS [H]
Identifier: 213691452
GI number: 213691452
Start: 618021
End: 619187
Strand: Direct
Name: tilS [H]
Synonym: Blon_0547
Alternate gene names: 213691452
Gene position: 618021-619187 (Clockwise)
Preceding gene: 213691451
Following gene: 213691453
Centisome position: 21.82
GC content: 62.9
Gene sequence:
>1167_bases ATGGCATATTCCGCACGATTGCGCAAGGCCGTAGGCGCGGTCCGCGCAACGCTGAGCGCTGTGGAACTATGCGATGTGCA GGCTCCCGAATTCGCGCAGCATGGGGACCATGCCGTTGCCGCCGATGCGCCGCTCGTGCTCGTGGCCTGTTCAGGCGGGC GCGATTCGATGGCACTGGCCGCGGTGAGCCATATCGTATGCACGTCCATGGGCGTGCGTTGCGGTGCCGTGATTGTGGAT CACGGCTTGCAGGAGGGTTCCGAACAGGTCGCCGGCGAGGCTGCGAATCGTTGCCGTGCGTTGGGACTGGGCCCGGTCAT CGTGCGCAACGCAACCGTGCAGGCACGCGGTGAGGGCCTCGAAGCGGCCGCGCGGCAGGCCCGGTACAACGAGCTGTGCG CCGCGGCGCGTGAATCAGGTGCCATTGCCGTGCTGTTGGCCCACACTATGGACGATCAGGCGGAAACCGTATTGATCGGA CTGCTGCGCAGCCGTGGCGTGGATGCGTTGGCCGGCATGCCGCAGGTCTTCACACGCAGTGGCGTGACTTTTGCGCGGCC GCTGCTTACCCTTACTCGAGCCGAGACCACCGGCATCTGTGAAGACTTAGGTGTGGAATATTGGGATGACCCCACCAATG GCGATGCGGTAGACGGCGAGTTGCCGAACGACTATCCGTTGCGCTCGCGGGTGCGCCATGACCTGCTGCCGGCCATCGAG CGATTCGCTGGATTCAATGTCGCCCGCCATTTCGCTGAAAGCGCACGGTTGGCCAGAATGGATAAGGAGTATCTGGATCA GCGATCCGACGAGGTGATGGGGGAGGCGGTTACGACAGTTGATTGGCCGGCATCGTCGGCAGCGGTATCGACCGATACGC CACGAGCCTGTGCGGCAGGCGATACCAACGATTCGAGCCATGGTGTCGGCCTGATGATCAGCGTCAGACGTATTGCACGT GAGCCAGAGGCGATTCGGTTGCGGGTCATCGCTCATGCGCTGAGCCAAGCCGGTGTGAACGCCAGTGCCGCCCAGATTGC CGCCATCGACCGGCTGGTCGTCGATTGGCATGGCCAAGGCGGCGTCTCACTTCCCAGAGGTTATTCAGCCAATCGCAAGA AACACGTCATTCGCGTGTGCCAAGATGGTGCGCATGCGAATCGCTGA
Upstream 100 bases:
>100_bases GGGGCTGTGAAAGACCCATCAAGTGCCATCAAAGGCTACAAAGGCCGTAAACGTCCATAAACGCACGAGTACACATAACC AGAAAAAGGGTGGTGAGTAC
Downstream 100 bases:
>100_bases CGTTGAGGAAGATATTGACCACGAGCTGGTCAGCAAAGAACAGATCGATGCCAAGATCCACGAGATGGCCGCTCTCGCGA GCGAGGATTACCGCGATAAG
Product: tRNA(Ile)-lysidine synthetase
Products: NA
Alternate protein names: tRNA(Ile)-2-lysyl-cytidine synthase; tRNA(Ile)-lysidine synthetase [H]
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MAYSARLRKAVGAVRATLSAVELCDVQAPEFAQHGDHAVAADAPLVLVACSGGRDSMALAAVSHIVCTSMGVRCGAVIVD HGLQEGSEQVAGEAANRCRALGLGPVIVRNATVQARGEGLEAAARQARYNELCAAARESGAIAVLLAHTMDDQAETVLIG LLRSRGVDALAGMPQVFTRSGVTFARPLLTLTRAETTGICEDLGVEYWDDPTNGDAVDGELPNDYPLRSRVRHDLLPAIE RFAGFNVARHFAESARLARMDKEYLDQRSDEVMGEAVTTVDWPASSAAVSTDTPRACAAGDTNDSSHGVGLMISVRRIAR EPEAIRLRVIAHALSQAGVNASAAQIAAIDRLVVDWHGQGGVSLPRGYSANRKKHVIRVCQDGAHANR
Sequences:
>Translated_388_residues MAYSARLRKAVGAVRATLSAVELCDVQAPEFAQHGDHAVAADAPLVLVACSGGRDSMALAAVSHIVCTSMGVRCGAVIVD HGLQEGSEQVAGEAANRCRALGLGPVIVRNATVQARGEGLEAAARQARYNELCAAARESGAIAVLLAHTMDDQAETVLIG LLRSRGVDALAGMPQVFTRSGVTFARPLLTLTRAETTGICEDLGVEYWDDPTNGDAVDGELPNDYPLRSRVRHDLLPAIE RFAGFNVARHFAESARLARMDKEYLDQRSDEVMGEAVTTVDWPASSAAVSTDTPRACAAGDTNDSSHGVGLMISVRRIAR EPEAIRLRVIAHALSQAGVNASAAQIAAIDRLVVDWHGQGGVSLPRGYSANRKKHVIRVCQDGAHANR >Mature_387_residues AYSARLRKAVGAVRATLSAVELCDVQAPEFAQHGDHAVAADAPLVLVACSGGRDSMALAAVSHIVCTSMGVRCGAVIVDH GLQEGSEQVAGEAANRCRALGLGPVIVRNATVQARGEGLEAAARQARYNELCAAARESGAIAVLLAHTMDDQAETVLIGL LRSRGVDALAGMPQVFTRSGVTFARPLLTLTRAETTGICEDLGVEYWDDPTNGDAVDGELPNDYPLRSRVRHDLLPAIER FAGFNVARHFAESARLARMDKEYLDQRSDEVMGEAVTTVDWPASSAAVSTDTPRACAAGDTNDSSHGVGLMISVRRIARE PEAIRLRVIAHALSQAGVNASAAQIAAIDRLVVDWHGQGGVSLPRGYSANRKKHVIRVCQDGAHANR
Specific function: Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionin
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA(Ile)-lysidine synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786386, Length=171, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012094 - InterPro: IPR012795 - InterPro: IPR014729 - InterPro: IPR011063 [H]
Pfam domain/function: PF01171 ATP_bind_3 [H]
EC number: NA
Molecular weight: Translated: 41053; Mature: 40922
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYSARLRKAVGAVRATLSAVELCDVQAPEFAQHGDHAVAADAPLVLVACSGGRDSMALA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEECCCCEEEEEECCCCCHHHHH AVSHIVCTSMGVRCGAVIVDHGLQEGSEQVAGEAANRCRALGLGPVIVRNATVQARGEGL HHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCCH EAAARQARYNELCAAARESGAIAVLLAHTMDDQAETVLIGLLRSRGVDALAGMPQVFTRS HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHC GVTFARPLLTLTRAETTGICEDLGVEYWDDPTNGDAVDGELPNDYPLRSRVRHDLLPAIE CCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RFAGFNVARHFAESARLARMDKEYLDQRSDEVMGEAVTTVDWPASSAAVSTDTPRACAAG HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEECCCCCCCCCCC DTNDSSHGVGLMISVRRIAREPEAIRLRVIAHALSQAGVNASAAQIAAIDRLVVDWHGQG CCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCC GVSLPRGYSANRKKHVIRVCQDGAHANR CCCCCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure AYSARLRKAVGAVRATLSAVELCDVQAPEFAQHGDHAVAADAPLVLVACSGGRDSMALA CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEECCCCEEEEEECCCCCHHHHH AVSHIVCTSMGVRCGAVIVDHGLQEGSEQVAGEAANRCRALGLGPVIVRNATVQARGEGL HHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCCH EAAARQARYNELCAAARESGAIAVLLAHTMDDQAETVLIGLLRSRGVDALAGMPQVFTRS HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHC GVTFARPLLTLTRAETTGICEDLGVEYWDDPTNGDAVDGELPNDYPLRSRVRHDLLPAIE CCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RFAGFNVARHFAESARLARMDKEYLDQRSDEVMGEAVTTVDWPASSAAVSTDTPRACAAG HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEECCCCCCCCCCC DTNDSSHGVGLMISVRRIAREPEAIRLRVIAHALSQAGVNASAAQIAAIDRLVVDWHGQG CCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCC GVSLPRGYSANRKKHVIRVCQDGAHANR CCCCCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA