Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is spaC [H]

Identifier: 213691426

GI number: 213691426

Start: 588594

End: 589799

Strand: Direct

Name: spaC [H]

Synonym: Blon_0521

Alternate gene names: 213691426

Gene position: 588594-589799 (Clockwise)

Preceding gene: 213691425

Following gene: 213691427

Centisome position: 20.78

GC content: 45.44

Gene sequence:

>1206_bases
ATGAAGACACGTAATGACATTCAACAGGAGGTGACCCTCATTGCAAGTAATCTCGAAGATATCATCCCCATTCGGTATCA
AGAGGCTAATCGTACGAAAAGCTTTAACATTAACGGAGGGACTCCTGCCGCAATTCTATATTTAAGTGTCCTTGACGCAT
TATTTCCCGATGCTGGATATGATGTTCAGGCTCACAACTACGCGACAAGCATGATTTTGGAATATAAACATACCCCAAAC
ATTGGAATTGGACTGTTCGGGGGGACCACACTATTGGCTTGGTGTCTGCAGTCGATTTCCCGTGGAGGAAGCAGATATCA
AGGCGCGATTAGAGAACTTGAATCGAGGATCGTCTTTCAGGCAAGACAACAATTGACATTTTTATCAAACGTGAATGCGC
CAATATCATCCGAATATTACGACGTTATATCCGGACTCTCTGGCGTGGTTTTGTATGGCATGCGATTCCGGTCCGATGGG
CTGCGATTGATTTCTCGGCAGATTTGCAGTAGATTTTGCGAACTATTAGCAACTTCGAATTTCCACGCCTTCGGGTCTTT
ATCAGCCACTTCGGGACAGGATTCCGTGGCTCAGAAGACGACCACCGACTATGGTTACGCGCATGGTATTTTGGGAGTAT
TGATGAGTTGCATTCTTTCGGATGTGAACCATGATAATAATATGGAACCATTCGCTGCGATAAGGCAGCTTGTTGATATT
TCGAATCACTCGAGAAACTACATACTTCCATACTCTTCCTCAGATTACACTGAAACCGTTAGTAATGGACGGTATGCCTG
GTGTTACGGCAACATGCCCTTCTATTTTTTGTCACTAATGCTGAAACCGGTTGATCCAATAATTGCGGAATCTCTATTGA
ATGCCGCTATTGCTCCCCTGAAGGTTAATACCAGTCAAGTACATGATCTTGGCGTAATCGGTCTTGTTGATAACTCTATA
TGCCATGGCCGAGCGGGAATAGTCCTAGGGCTTCACCCCTACTTGAGCCACAAGGATAGTCGGCCTATTCGCGATCAGCT
CCTTGAAGAGATCGATTGTTCTGTTGCGAATCCTATTGACAGTGGATTTCTCGAAGGCGACTTGGGCACCTTGGCTGTCC
GAGTGGCACTAGAATACACCGACTCTATTGCGCATCTACCGGCTTTCTTTCCTTTTGTTTCTCCTACACTTTGGGAGGGA
ATATGA

Upstream 100 bases:

>100_bases
ACATGTCTGCAAATCGCCTTGGGCTTGATCGTAAAGACGAGGCCATATTCTGGCGGGCTCTTCTCAATCATCTAAGATCC
GCAGATTTTGGAGGTGAGGA

Downstream 100 bases:

>100_bases
TTGCTAGAGCATTAAATGTGACACTGATCTATGGAAAATCGAGAAATCCAGTCTTGCATAGTTTGAACCTTGAAATCGAT
TCAGGGCAAGTTCTTCCAAT

Product: Lanthionine synthetase C family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MKTRNDIQQEVTLIASNLEDIIPIRYQEANRTKSFNINGGTPAAILYLSVLDALFPDAGYDVQAHNYATSMILEYKHTPN
IGIGLFGGTTLLAWCLQSISRGGSRYQGAIRELESRIVFQARQQLTFLSNVNAPISSEYYDVISGLSGVVLYGMRFRSDG
LRLISRQICSRFCELLATSNFHAFGSLSATSGQDSVAQKTTTDYGYAHGILGVLMSCILSDVNHDNNMEPFAAIRQLVDI
SNHSRNYILPYSSSDYTETVSNGRYAWCYGNMPFYFLSLMLKPVDPIIAESLLNAAIAPLKVNTSQVHDLGVIGLVDNSI
CHGRAGIVLGLHPYLSHKDSRPIRDQLLEEIDCSVANPIDSGFLEGDLGTLAVRVALEYTDSIAHLPAFFPFVSPTLWEG
I

Sequences:

>Translated_401_residues
MKTRNDIQQEVTLIASNLEDIIPIRYQEANRTKSFNINGGTPAAILYLSVLDALFPDAGYDVQAHNYATSMILEYKHTPN
IGIGLFGGTTLLAWCLQSISRGGSRYQGAIRELESRIVFQARQQLTFLSNVNAPISSEYYDVISGLSGVVLYGMRFRSDG
LRLISRQICSRFCELLATSNFHAFGSLSATSGQDSVAQKTTTDYGYAHGILGVLMSCILSDVNHDNNMEPFAAIRQLVDI
SNHSRNYILPYSSSDYTETVSNGRYAWCYGNMPFYFLSLMLKPVDPIIAESLLNAAIAPLKVNTSQVHDLGVIGLVDNSI
CHGRAGIVLGLHPYLSHKDSRPIRDQLLEEIDCSVANPIDSGFLEGDLGTLAVRVALEYTDSIAHLPAFFPFVSPTLWEG
I
>Mature_401_residues
MKTRNDIQQEVTLIASNLEDIIPIRYQEANRTKSFNINGGTPAAILYLSVLDALFPDAGYDVQAHNYATSMILEYKHTPN
IGIGLFGGTTLLAWCLQSISRGGSRYQGAIRELESRIVFQARQQLTFLSNVNAPISSEYYDVISGLSGVVLYGMRFRSDG
LRLISRQICSRFCELLATSNFHAFGSLSATSGQDSVAQKTTTDYGYAHGILGVLMSCILSDVNHDNNMEPFAAIRQLVDI
SNHSRNYILPYSSSDYTETVSNGRYAWCYGNMPFYFLSLMLKPVDPIIAESLLNAAIAPLKVNTSQVHDLGVIGLVDNSI
CHGRAGIVLGLHPYLSHKDSRPIRDQLLEEIDCSVANPIDSGFLEGDLGTLAVRVALEYTDSIAHLPAFFPFVSPTLWEG
I

Specific function: Could be implicated in the processing or the export process of the subtilin lantibiotic [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.epidermidis epiC and L.lactis nisC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007822
- InterPro:   IPR020452 [H]

Pfam domain/function: PF05147 LANC_like [H]

EC number: NA

Molecular weight: Translated: 44138; Mature: 44138

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRNDIQQEVTLIASNLEDIIPIRYQEANRTKSFNINGGTPAAILYLSVLDALFPDAGY
CCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCC
DVQAHNYATSMILEYKHTPNIGIGLFGGTTLLAWCLQSISRGGSRYQGAIRELESRIVFQ
CEEHHHHHHHHEEEECCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ARQQLTFLSNVNAPISSEYYDVISGLSGVVLYGMRFRSDGLRLISRQICSRFCELLATSN
HHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
FHAFGSLSATSGQDSVAQKTTTDYGYAHGILGVLMSCILSDVNHDNNMEPFAAIRQLVDI
CCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
SNHSRNYILPYSSSDYTETVSNGRYAWCYGNMPFYFLSLMLKPVDPIIAESLLNAAIAPL
CCCCCCEEEECCCCCHHHHHCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCE
KVNTSQVHDLGVIGLVDNSICHGRAGIVLGLHPYLSHKDSRPIRDQLLEEIDCSVANPID
ECCHHHHHHCEEEEEECCCCCCCCCCEEEEECHHHCCCCCCCHHHHHHHHHCCCCCCCCC
SGFLEGDLGTLAVRVALEYTDSIAHLPAFFPFVSPTLWEGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MKTRNDIQQEVTLIASNLEDIIPIRYQEANRTKSFNINGGTPAAILYLSVLDALFPDAGY
CCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCC
DVQAHNYATSMILEYKHTPNIGIGLFGGTTLLAWCLQSISRGGSRYQGAIRELESRIVFQ
CEEHHHHHHHHEEEECCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ARQQLTFLSNVNAPISSEYYDVISGLSGVVLYGMRFRSDGLRLISRQICSRFCELLATSN
HHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
FHAFGSLSATSGQDSVAQKTTTDYGYAHGILGVLMSCILSDVNHDNNMEPFAAIRQLVDI
CCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
SNHSRNYILPYSSSDYTETVSNGRYAWCYGNMPFYFLSLMLKPVDPIIAESLLNAAIAPL
CCCCCCEEEECCCCCHHHHHCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCE
KVNTSQVHDLGVIGLVDNSICHGRAGIVLGLHPYLSHKDSRPIRDQLLEEIDCSVANPID
ECCHHHHHHCEEEEEECCCCCCCCCCEEEEECHHHCCCCCCCHHHHHHHHHCCCCCCCCC
SGFLEGDLGTLAVRVALEYTDSIAHLPAFFPFVSPTLWEGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1539969; 1735728 [H]