| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691403
Identifier: 213691403
GI number: 213691403
Start: 566670
End: 567911
Strand: Direct
Name: 213691403
Synonym: Blon_0497
Alternate gene names: NA
Gene position: 566670-567911 (Clockwise)
Preceding gene: 213691402
Following gene: 213691405
Centisome position: 20.0
GC content: 37.12
Gene sequence:
>1242_bases ATGCATGTATGCATGATTAATCGTGTGCCCTGGGTTCGCGCCTCTGTAACTTCGTGGCTTGAGCACTCAGAAATGGAAGA CACAGATGTAGTTTTAATTTCTCGATACGATATACCAGACTCTGAAAAAAGAGGATTGAGCAAATTTGTTTACTTCGAAT CTTATGATGATGATTTAGCGCTTGAAAAACTTGTGATAGAGCTGCATGGCGAAAGACCTTTTGACAGAATCATTGCCTTG TCAGAGCTGGACATTCTGAGGGCCGCTAAGCTAAGAAGCTTGCTCGATATTCCTGGTCAATCTTATTTCAGCGCATTTCT CTATCGAGATAAAATTGCTATGAAAGAATGGGCGAGTCTTGCGGGAATCTCGGTGCCTTCGTTCACGGTTGCTTTTGATC AAGAAGATATTTATTCTTTCGTGGCGAGACATGGATTCCCTATCATAATAAAGCCGAAGAATGAATATGGATCTAAGAAT GTTTCACTCATTTCAGATAAGGGTGAGCTTCAATCCTTTTGCCGAGTTTTAGATTTTAATGATGGACTAGATGTCGAGTC TTTCATTCAGGGAAATCTTTACCATGTAGATGGAATAATATCCAATGGACGGCTTGTGTTCACATCAGTATCGATGTATT TGAACTCCTCTGGAAAAAGTACAACTTTGTTTAACGAGGATATTAAACCTCAATTTCCATTGAGCACAGTTGCAGATCTA CAGATATCTCCATTTTCTACTCCTTTTAAGGTTCTGACAAATGAAACGCGCAAATTGCTTGCGGACCCAAAGTTTGATAA TGGATCTATTCATGCAGAATGGATCCTTGATGAATCAATGAAACCTTATTTCATAGAAATAGCAAGTCGTACTGGTGGTT TGCTCATAAGCGATGCCATACAGCGAAAATATGGTTTTATAATGAACGAAGAGTCTTTTCGCGTACAGCTTGGTTTACCG TTCTGTGCATCATGTGTTACGGATAAATTGTATGGTTACTTGTCGATTCTGCCAAAAAGAGGCAGAATCGACAAGTATGA TATTAATACAATTGCTAATAATTCTAACGTAATATCATTTTTTACTTCATATAAAAGTGGAGATTATATCGATGCTCAAT CTGAATCTACTGATAATATTGGACTTCTTTTATTTGAAATAGATCAACGAAAGACATTATTGGAACAAGTAGAATATTGG ACTCTTTTTTTGAATTCTAAAATTCATGTTTTAAGTGACTAA
Upstream 100 bases:
>100_bases GAGGTTATATCATAATTGATGATATAGATTATTTTTCGCTTGAACGTCAGATGAATTGTGTACTTAGTTTATTTCATATA AACACATCTAAGGAGTGAAC
Downstream 100 bases:
>100_bases GTCTTCTGCTCCTGCTCGCTCATCCTGAAAGTTGTTTAGAATTGTGAACGAGATGAGTGCTTGAACCGCCATTGAGTATG GTCGATTGCGGATATGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphoribosylglycinamide Synthetase; Amino Acid Ligase Of ATP-Grasp Superfamily; NikS Protein; Nikkomycin Biosynthesis Protein Carboxylase; Carbamoyl-Phosphate Synthase Cpsase Protein; HsvC Protein; ATP-Dependent Carboxylate-Amine Ligase; Nikkomycin Biosynthesis Protein SanS; Nikkomycin Biosynthesis Protein; Phosphoribosylglycinamide Synthetase ATP-Grasp; LOW QUALITY PROTEIN Biotin Carboxylase; Carbamoyl-Phosphate Synthase Large Chain; Biotin Carboxylase-Like Protein; Nikkomycin Biosynthesis Domain Protein; D-Alanine-D-Alanine Ligase A
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MHVCMINRVPWVRASVTSWLEHSEMEDTDVVLISRYDIPDSEKRGLSKFVYFESYDDDLALEKLVIELHGERPFDRIIAL SELDILRAAKLRSLLDIPGQSYFSAFLYRDKIAMKEWASLAGISVPSFTVAFDQEDIYSFVARHGFPIIIKPKNEYGSKN VSLISDKGELQSFCRVLDFNDGLDVESFIQGNLYHVDGIISNGRLVFTSVSMYLNSSGKSTTLFNEDIKPQFPLSTVADL QISPFSTPFKVLTNETRKLLADPKFDNGSIHAEWILDESMKPYFIEIASRTGGLLISDAIQRKYGFIMNEESFRVQLGLP FCASCVTDKLYGYLSILPKRGRIDKYDINTIANNSNVISFFTSYKSGDYIDAQSESTDNIGLLLFEIDQRKTLLEQVEYW TLFLNSKIHVLSD
Sequences:
>Translated_413_residues MHVCMINRVPWVRASVTSWLEHSEMEDTDVVLISRYDIPDSEKRGLSKFVYFESYDDDLALEKLVIELHGERPFDRIIAL SELDILRAAKLRSLLDIPGQSYFSAFLYRDKIAMKEWASLAGISVPSFTVAFDQEDIYSFVARHGFPIIIKPKNEYGSKN VSLISDKGELQSFCRVLDFNDGLDVESFIQGNLYHVDGIISNGRLVFTSVSMYLNSSGKSTTLFNEDIKPQFPLSTVADL QISPFSTPFKVLTNETRKLLADPKFDNGSIHAEWILDESMKPYFIEIASRTGGLLISDAIQRKYGFIMNEESFRVQLGLP FCASCVTDKLYGYLSILPKRGRIDKYDINTIANNSNVISFFTSYKSGDYIDAQSESTDNIGLLLFEIDQRKTLLEQVEYW TLFLNSKIHVLSD >Mature_413_residues MHVCMINRVPWVRASVTSWLEHSEMEDTDVVLISRYDIPDSEKRGLSKFVYFESYDDDLALEKLVIELHGERPFDRIIAL SELDILRAAKLRSLLDIPGQSYFSAFLYRDKIAMKEWASLAGISVPSFTVAFDQEDIYSFVARHGFPIIIKPKNEYGSKN VSLISDKGELQSFCRVLDFNDGLDVESFIQGNLYHVDGIISNGRLVFTSVSMYLNSSGKSTTLFNEDIKPQFPLSTVADL QISPFSTPFKVLTNETRKLLADPKFDNGSIHAEWILDESMKPYFIEIASRTGGLLISDAIQRKYGFIMNEESFRVQLGLP FCASCVTDKLYGYLSILPKRGRIDKYDINTIANNSNVISFFTSYKSGDYIDAQSESTDNIGLLLFEIDQRKTLLEQVEYW TLFLNSKIHVLSD
Specific function: Unknown
COG id: COG0439
COG function: function code I; Biotin carboxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47004; Mature: 47004
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVCMINRVPWVRASVTSWLEHSEMEDTDVVLISRYDIPDSEKRGLSKFVYFESYDDDLA CEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHCCCEEEEEEECCCCHHH LEKLVIELHGERPFDRIIALSELDILRAAKLRSLLDIPGQSYFSAFLYRDKIAMKEWASL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AGISVPSFTVAFDQEDIYSFVARHGFPIIIKPKNEYGSKNVSLISDKGELQSFCRVLDFN CCCCCCCEEEEECHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCHHHHHHHHHHCCC DGLDVESFIQGNLYHVDGIISNGRLVFTSVSMYLNSSGKSTTLFNEDIKPQFPLSTVADL CCCCHHHHHCCCEEEEEEEEECCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCC QISPFSTPFKVLTNETRKLLADPKFDNGSIHAEWILDESMKPYFIEIASRTGGLLISDAI EECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEHHHH QRKYGFIMNEESFRVQLGLPFCASCVTDKLYGYLSILPKRGRIDKYDINTIANNSNVISF HHHHCEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEECEEECCCCCEEEE FTSYKSGDYIDAQSESTDNIGLLLFEIDQRKTLLEQVEYWTLFLNSKIHVLSD EECCCCCCEECCCCCCCCCEEEEEEEECHHHHHHHHHHEEEEEECCEEEEECC >Mature Secondary Structure MHVCMINRVPWVRASVTSWLEHSEMEDTDVVLISRYDIPDSEKRGLSKFVYFESYDDDLA CEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHCCCEEEEEEECCCCHHH LEKLVIELHGERPFDRIIALSELDILRAAKLRSLLDIPGQSYFSAFLYRDKIAMKEWASL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AGISVPSFTVAFDQEDIYSFVARHGFPIIIKPKNEYGSKNVSLISDKGELQSFCRVLDFN CCCCCCCEEEEECHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCHHHHHHHHHHCCC DGLDVESFIQGNLYHVDGIISNGRLVFTSVSMYLNSSGKSTTLFNEDIKPQFPLSTVADL CCCCHHHHHCCCEEEEEEEEECCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCC QISPFSTPFKVLTNETRKLLADPKFDNGSIHAEWILDESMKPYFIEIASRTGGLLISDAI EECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEHHHH QRKYGFIMNEESFRVQLGLPFCASCVTDKLYGYLSILPKRGRIDKYDINTIANNSNVISF HHHHCEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEECEEECCCCCEEEE FTSYKSGDYIDAQSESTDNIGLLLFEIDQRKTLLEQVEYWTLFLNSKIHVLSD EECCCCCCEECCCCCCCCCEEEEEEEECHHHHHHHHHHEEEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA