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The map label for this gene is 213691405

Identifier: 213691405

GI number: 213691405

Start: 569828

End: 571093

Strand: Direct

Name: 213691405

Synonym: Blon_0499

Alternate gene names: NA

Gene position: 569828-571093 (Clockwise)

Preceding gene: 213691403

Following gene: 213691408

Centisome position: 20.12

GC content: 45.1

Gene sequence:

>1266_bases
ATGCACCAGAACAGGTATTCCCAGAAAAAGCAATCGCGTAAAGCTCGCAGTAAGTGGGGAACGGTTATAGCTCGATACAG
CAAAGATGGTGAAATCGTGGCTTGGCAGGTTCGCTATCCTCATCCTACGGAATCAGGGAAACGTGTTCAAAGACAGTTCA
AACCTTGGCAAGAGTTGGAAGCTCGAAAATGGCTTGAGGAAGAAAAATACTTGGTTGATCTTCAACATAAGGGAATTCTC
ACTTGGACTCATCCGACACTGAGAAAAAGAGAAGCAATGCAAGAAGATGACAAGACGAAGCGAGATAAAGTCAAATTCTG
CGATTATGTGAATTGGTGGGAAAAGAATTATCGACTACCGAACGGCGAAGATGTAGCAGGAGGAACTAGGCGCAACCTTC
ATGTGGATATAGGACATTTTATGCCTTTTTTCGAGAACTTGCTTCTCACTGAGATTACGCCAATGATAATCAAAGAATGG
TATGATGCTCCTCACTGCGAGGGACCCTGGGCATTTCGTCGTTCTTGCATGAGGTTGAAAGCGGTACTGGAATCTGCGAC
AAAGGCCGGATTAGACGGATCTGCGTCATTGCTGCAATTCAATCCTTTTATATTCCATATTCCTCCAGCCCCTCGATCAT
CTCGAATTGATATTCCTCCAGTTACGCCGCATGAGCTTCGGATTTTAGCCGAGTCAATGCCGACGTACACGCGGTTATCG
GTATTTTTTTCCACTTTAGCGGGAGGTTTGCGATGCGGTGAGCTATGCGGTCTTCAAATTAGAGATATTGACCTGGACAA
ACAAACGCTGCACGTGCGGCATTCAGTGAACCGAGGTAAAACAGATAGAGGTACGGTCCAATACGGCAAGACTAAAACAG
AATCTAGTGTGAGGAACGTGCATATACCGGATGCGATTATGCCAATGCTGCGACAGCATTTATGCGACTATTGCGATATA
TCTACTCCTGACTCTCCGGTATTTGTTCCTAAACGATCGAAGATAATGTCGCAGACCACGTTAGAACGCCAGTTTGCTAA
AGCGCGAATAAAGGCGAATCGACCCGATCTGACTTTTCAGGGATTGCGTGCGAGTCATGCGACTCTATTGATGTTACAAG
GGGGAACTCTGCGTGAAGTTATGAATGAACTGGGGCATGTCAGCGAAAAAGTTGCTGTTAGATATTATCAGTTGACGGTT
GCTGAGCATCAAAGTCATATTGTAGATACTTTGGCACGAGATTTTATATTTGAAAGCAGCAGGTAA

Upstream 100 bases:

>100_bases
GACAACAATTCAGCAAAAATGCTGGTTATCAGGAATTCTTGGTTTCAATCTCTCACAAGAGGCATATATTCAGTGCACCT
CTTTGATTTACGGAGATGTT

Downstream 100 bases:

>100_bases
AATAGACTTTATAAAGAAATTGTATTAGACGATCCGTCTACGTTTCAGAGAGAGTTTATCTAATGCACGACGCCTGACGG
TAATCAAGCCGTATGCGGAG

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MHQNRYSQKKQSRKARSKWGTVIARYSKDGEIVAWQVRYPHPTESGKRVQRQFKPWQELEARKWLEEEKYLVDLQHKGIL
TWTHPTLRKREAMQEDDKTKRDKVKFCDYVNWWEKNYRLPNGEDVAGGTRRNLHVDIGHFMPFFENLLLTEITPMIIKEW
YDAPHCEGPWAFRRSCMRLKAVLESATKAGLDGSASLLQFNPFIFHIPPAPRSSRIDIPPVTPHELRILAESMPTYTRLS
VFFSTLAGGLRCGELCGLQIRDIDLDKQTLHVRHSVNRGKTDRGTVQYGKTKTESSVRNVHIPDAIMPMLRQHLCDYCDI
STPDSPVFVPKRSKIMSQTTLERQFAKARIKANRPDLTFQGLRASHATLLMLQGGTLREVMNELGHVSEKVAVRYYQLTV
AEHQSHIVDTLARDFIFESSR

Sequences:

>Translated_421_residues
MHQNRYSQKKQSRKARSKWGTVIARYSKDGEIVAWQVRYPHPTESGKRVQRQFKPWQELEARKWLEEEKYLVDLQHKGIL
TWTHPTLRKREAMQEDDKTKRDKVKFCDYVNWWEKNYRLPNGEDVAGGTRRNLHVDIGHFMPFFENLLLTEITPMIIKEW
YDAPHCEGPWAFRRSCMRLKAVLESATKAGLDGSASLLQFNPFIFHIPPAPRSSRIDIPPVTPHELRILAESMPTYTRLS
VFFSTLAGGLRCGELCGLQIRDIDLDKQTLHVRHSVNRGKTDRGTVQYGKTKTESSVRNVHIPDAIMPMLRQHLCDYCDI
STPDSPVFVPKRSKIMSQTTLERQFAKARIKANRPDLTFQGLRASHATLLMLQGGTLREVMNELGHVSEKVAVRYYQLTV
AEHQSHIVDTLARDFIFESSR
>Mature_421_residues
MHQNRYSQKKQSRKARSKWGTVIARYSKDGEIVAWQVRYPHPTESGKRVQRQFKPWQELEARKWLEEEKYLVDLQHKGIL
TWTHPTLRKREAMQEDDKTKRDKVKFCDYVNWWEKNYRLPNGEDVAGGTRRNLHVDIGHFMPFFENLLLTEITPMIIKEW
YDAPHCEGPWAFRRSCMRLKAVLESATKAGLDGSASLLQFNPFIFHIPPAPRSSRIDIPPVTPHELRILAESMPTYTRLS
VFFSTLAGGLRCGELCGLQIRDIDLDKQTLHVRHSVNRGKTDRGTVQYGKTKTESSVRNVHIPDAIMPMLRQHLCDYCDI
STPDSPVFVPKRSKIMSQTTLERQFAKARIKANRPDLTFQGLRASHATLLMLQGGTLREVMNELGHVSEKVAVRYYQLTV
AEHQSHIVDTLARDFIFESSR

Specific function: Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome [H]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 48809; Mature: 48809

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQNRYSQKKQSRKARSKWGTVIARYSKDGEIVAWQVRYPHPTESGKRVQRQFKPWQELE
CCCCHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHH
ARKWLEEEKYLVDLQHKGILTWTHPTLRKREAMQEDDKTKRDKVKFCDYVNWWEKNYRLP
HHHHHHHHHHEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NGEDVAGGTRRNLHVDIGHFMPFFENLLLTEITPMIIKEWYDAPHCEGPWAFRRSCMRLK
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
AVLESATKAGLDGSASLLQFNPFIFHIPPAPRSSRIDIPPVTPHELRILAESMPTYTRLS
HHHHHHHHCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHH
VFFSTLAGGLRCGELCGLQIRDIDLDKQTLHVRHSVNRGKTDRGTVQYGKTKTESSVRNV
HHHHHHHCCCCHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEE
HIPDAIMPMLRQHLCDYCDISTPDSPVFVPKRSKIMSQTTLERQFAKARIKANRPDLTFQ
ECCHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEC
GLRASHATLLMLQGGTLREVMNELGHVSEKVAVRYYQLTVAEHQSHIVDTLARDFIFESS
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHCCC
R
C
>Mature Secondary Structure
MHQNRYSQKKQSRKARSKWGTVIARYSKDGEIVAWQVRYPHPTESGKRVQRQFKPWQELE
CCCCHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHH
ARKWLEEEKYLVDLQHKGILTWTHPTLRKREAMQEDDKTKRDKVKFCDYVNWWEKNYRLP
HHHHHHHHHHEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NGEDVAGGTRRNLHVDIGHFMPFFENLLLTEITPMIIKEWYDAPHCEGPWAFRRSCMRLK
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
AVLESATKAGLDGSASLLQFNPFIFHIPPAPRSSRIDIPPVTPHELRILAESMPTYTRLS
HHHHHHHHCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHH
VFFSTLAGGLRCGELCGLQIRDIDLDKQTLHVRHSVNRGKTDRGTVQYGKTKTESSVRNV
HHHHHHHCCCCHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEE
HIPDAIMPMLRQHLCDYCDISTPDSPVFVPKRSKIMSQTTLERQFAKARIKANRPDLTFQ
ECCHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEC
GLRASHATLLMLQGGTLREVMNELGHVSEKVAVRYYQLTVAEHQSHIVDTLARDFIFESS
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]