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The map label for this gene is 213691395

Identifier: 213691395

GI number: 213691395

Start: 558309

End: 558920

Strand: Direct

Name: 213691395

Synonym: Blon_0489

Alternate gene names: NA

Gene position: 558309-558920 (Clockwise)

Preceding gene: 213691393

Following gene: 213691396

Centisome position: 19.71

GC content: 52.45

Gene sequence:

>612_bases
ATGACATACACTACAGCGGGTTTGCGATGCGGGGAATTGTGCGGACTGCAGGTTGGGGATATCGATCTTATGTCGAGAAC
GCTGCGCGTCCGGCATTCCGTCAACCGAGGCCGAACAGATCGTGGTCGCGTGCGAATCGCCGATACCAAGACGCGTTCCA
GCATACGCAGTGTGCCCATTCCGGACGGGCTCATCCCCGTGATTGGTGATCATCTGCGTCAGCACTGTGACTGGACTGAT
CCCGATGCCATGGTGTTCCCGCCAAGACGGGTGAAGATTATGAGTCAAACAACGCTGGAAGGTCAGTTCCGCAAAGCCAG
AGAAAAAGCGGGAAGACCTGATCTAACCTTTAAATCGTTGCGTGCCAGCCATGCGACACTGCTGATGCTCAGGGGCGGCA
CGTTGCGTGAAGTTATGGACGAGCTGGGGCACTCCAGCGAGAAGGTCGCCATCAAGCACTACCAGCGCATCGTCGATCAG
CACCGGAGTCAAGTTGTCAACCAACTCGTAGATGAATTCATACATAGCCAGTATGAGTCAACTATAGATGACAAAAAACT
AGTAAACAGAATGAGAAGAAAACCAAAGTGCAATAATACAGACACTCGATAG

Upstream 100 bases:

>100_bases
CAATCTGATTATCATCCATATGCCTTTCGCATGAACATCATTGCCATTGCCCGCAATGCTACCATGCAAGCCGAAGAGAG
CGAATGTTTCATTATCGCAG

Downstream 100 bases:

>100_bases
AGGTGAGGTGAGAAGAATGAGTTATGATTGGGTCGATGCGAAAATTATAGCTGTATCAGATTGTGATTCCTCTCATGTTG
CTATTGATATTGAAGTAAAA

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MTYTTAGLRCGELCGLQVGDIDLMSRTLRVRHSVNRGRTDRGRVRIADTKTRSSIRSVPIPDGLIPVIGDHLRQHCDWTD
PDAMVFPPRRVKIMSQTTLEGQFRKAREKAGRPDLTFKSLRASHATLLMLRGGTLREVMDELGHSSEKVAIKHYQRIVDQ
HRSQVVNQLVDEFIHSQYESTIDDKKLVNRMRRKPKCNNTDTR

Sequences:

>Translated_203_residues
MTYTTAGLRCGELCGLQVGDIDLMSRTLRVRHSVNRGRTDRGRVRIADTKTRSSIRSVPIPDGLIPVIGDHLRQHCDWTD
PDAMVFPPRRVKIMSQTTLEGQFRKAREKAGRPDLTFKSLRASHATLLMLRGGTLREVMDELGHSSEKVAIKHYQRIVDQ
HRSQVVNQLVDEFIHSQYESTIDDKKLVNRMRRKPKCNNTDTR
>Mature_202_residues
TYTTAGLRCGELCGLQVGDIDLMSRTLRVRHSVNRGRTDRGRVRIADTKTRSSIRSVPIPDGLIPVIGDHLRQHCDWTDP
DAMVFPPRRVKIMSQTTLEGQFRKAREKAGRPDLTFKSLRASHATLLMLRGGTLREVMDELGHSSEKVAIKHYQRIVDQH
RSQVVNQLVDEFIHSQYESTIDDKKLVNRMRRKPKCNNTDTR

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 23272; Mature: 23141

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYTTAGLRCGELCGLQVGDIDLMSRTLRVRHSVNRGRTDRGRVRIADTKTRSSIRSVPI
CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHCCCCC
PDGLIPVIGDHLRQHCDWTDPDAMVFPPRRVKIMSQTTLEGQFRKAREKAGRPDLTFKSL
CCCCHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RASHATLLMLRGGTLREVMDELGHSSEKVAIKHYQRIVDQHRSQVVNQLVDEFIHSQYES
HHHHHEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIDDKKLVNRMRRKPKCNNTDTR
CCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TYTTAGLRCGELCGLQVGDIDLMSRTLRVRHSVNRGRTDRGRVRIADTKTRSSIRSVPI
CCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHCCCCC
PDGLIPVIGDHLRQHCDWTDPDAMVFPPRRVKIMSQTTLEGQFRKAREKAGRPDLTFKSL
CCCCHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
RASHATLLMLRGGTLREVMDELGHSSEKVAIKHYQRIVDQHRSQVVNQLVDEFIHSQYES
HHHHHEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIDDKKLVNRMRRKPKCNNTDTR
CCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]