| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691393
Identifier: 213691393
GI number: 213691393
Start: 556739
End: 557527
Strand: Direct
Name: 213691393
Synonym: Blon_0487
Alternate gene names: NA
Gene position: 556739-557527 (Clockwise)
Preceding gene: 213691392
Following gene: 213691395
Centisome position: 19.65
GC content: 65.4
Gene sequence:
>789_bases ATGAACAGGACGGGACGATGCCTACGACGTTTGATGCTGCTCATGCGCTACGCGGTCTGCCGGCCGGCACCGCTGACTGC TTGGCTTGGTCTGCCGGTGGCGTTCATCGCGTTCTCCGCACTGACCAGCGCCTCCGTGCGGCTCATGTTCTCCGCCGATT CCAAGCTCGACGGCCTGGCCACGCTTGCGGGCATGGGGCCGAGCATCGCCGGCGCCGTCATGCCCATGACCGAGCCCGTG GCGATCGTCGCCGCGCTGCTCACCATCCGCATCCTGACCAACACGGCCACCGCCGTGCCGTTGTTTCTGGTCGAGCCGAA ACGGACGCGACTGTTCCTGGCCCTGTGCGCCGACATCGCCATCATCGGCACCACCGTGACGGCAGCCGGCGCGCTTGCCG CGACCGGGGTCTCCCGTCTCATCCTCAATCCCGTCGTGCCCGAACAGGCATGGCCCGCGCCGCTGTCCACGGCATTGCTG CTGTGCCTGCCCGTGGCGTTGATACTCGCCGGACGAATGTTGGTCGCCGCCGCGTTATGCGTGACCCTCGACTCGGCGGG CAAAGGCGCGGCCGCCTACATAGCCCTGTATTATCTCCTGCCCATCGTCGTGACCAATCTGCAGGCACCCCAAACGTTGC ACGAATGGCTGCCCTCCATAGCCGGCACCGCCATACTGGAACCCAAACCAGGCATCAGCCCGATGCTCAGCGGCGCGATT GCCCTCGCGTATGCCATGACCGCAATCGGCATCGCCTGCATCGCCCAAAAGCAGAGAGATATCAGATGA
Upstream 100 bases:
>100_bases GGCATGACGCCACACTGGTCCGTCTGGACCATGCCGAGCCGACATTACGTGACGTGATGACCGGCATGATCCGGCAAACC CCGGAAAAGGAACGCGCATC
Downstream 100 bases:
>100_bases TCAATCTTTGTGGAATTTGTCGAGAAGCTATTGTAAGCAGCCGCGGTGGTTGCTTCCCGTCAGTGGGAATAACGTAGCAT CGTCGATGCACAGTGACGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MNRTGRCLRRLMLLMRYAVCRPAPLTAWLGLPVAFIAFSALTSASVRLMFSADSKLDGLATLAGMGPSIAGAVMPMTEPV AIVAALLTIRILTNTATAVPLFLVEPKRTRLFLALCADIAIIGTTVTAAGALAATGVSRLILNPVVPEQAWPAPLSTALL LCLPVALILAGRMLVAAALCVTLDSAGKGAAAYIALYYLLPIVVTNLQAPQTLHEWLPSIAGTAILEPKPGISPMLSGAI ALAYAMTAIGIACIAQKQRDIR
Sequences:
>Translated_262_residues MNRTGRCLRRLMLLMRYAVCRPAPLTAWLGLPVAFIAFSALTSASVRLMFSADSKLDGLATLAGMGPSIAGAVMPMTEPV AIVAALLTIRILTNTATAVPLFLVEPKRTRLFLALCADIAIIGTTVTAAGALAATGVSRLILNPVVPEQAWPAPLSTALL LCLPVALILAGRMLVAAALCVTLDSAGKGAAAYIALYYLLPIVVTNLQAPQTLHEWLPSIAGTAILEPKPGISPMLSGAI ALAYAMTAIGIACIAQKQRDIR >Mature_262_residues MNRTGRCLRRLMLLMRYAVCRPAPLTAWLGLPVAFIAFSALTSASVRLMFSADSKLDGLATLAGMGPSIAGAVMPMTEPV AIVAALLTIRILTNTATAVPLFLVEPKRTRLFLALCADIAIIGTTVTAAGALAATGVSRLILNPVVPEQAWPAPLSTALL LCLPVALILAGRMLVAAALCVTLDSAGKGAAAYIALYYLLPIVVTNLQAPQTLHEWLPSIAGTAILEPKPGISPMLSGAI ALAYAMTAIGIACIAQKQRDIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27280; Mature: 27280
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRTGRCLRRLMLLMRYAVCRPAPLTAWLGLPVAFIAFSALTSASVRLMFSADSKLDGLA CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHH TLAGMGPSIAGAVMPMTEPVAIVAALLTIRILTNTATAVPLFLVEPKRTRLFLALCADIA HHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHCEEEEECCCHHHHHHHHHHHHH IIGTTVTAAGALAATGVSRLILNPVVPEQAWPAPLSTALLLCLPVALILAGRMLVAAALC HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VTLDSAGKGAAAYIALYYLLPIVVTNLQAPQTLHEWLPSIAGTAILEPKPGISPMLSGAI HHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHH ALAYAMTAIGIACIAQKQRDIR HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNRTGRCLRRLMLLMRYAVCRPAPLTAWLGLPVAFIAFSALTSASVRLMFSADSKLDGLA CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHH TLAGMGPSIAGAVMPMTEPVAIVAALLTIRILTNTATAVPLFLVEPKRTRLFLALCADIA HHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHCEEEEECCCHHHHHHHHHHHHH IIGTTVTAAGALAATGVSRLILNPVVPEQAWPAPLSTALLLCLPVALILAGRMLVAAALC HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VTLDSAGKGAAAYIALYYLLPIVVTNLQAPQTLHEWLPSIAGTAILEPKPGISPMLSGAI HHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHH ALAYAMTAIGIACIAQKQRDIR HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA