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The map label for this gene is nodI [H]

Identifier: 213691386

GI number: 213691386

Start: 550658

End: 551266

Strand: Reverse

Name: nodI [H]

Synonym: Blon_0480

Alternate gene names: 213691386

Gene position: 551266-550658 (Counterclockwise)

Preceding gene: 213691387

Following gene: 213691385

Centisome position: 19.46

GC content: 55.67

Gene sequence:

>609_bases
TTGCATGGGATCTCATTTGCCGCCTATGCAGGTCGAGTCACCGTTCTGATGGGAGCGCATGACGCTGGCAAAACAACTGT
TCTCCGGATGCTGTTGGGACTGGATATCCCGGATTCCGGATGCATATCCACCTGTGGCAAACCCTATGGCACATCCCGTA
TACCAAAAAACGTTGTGAGTGCAATGCCCGAAGCCATTTCACTGTCCCCGTATTACTCGGCCGGAACCTATCTTCGTTGG
AAGGCGCTCTGGGCCGGGACGCCTGATCCGCTTCTTGACGGGATCATTCACATGACCGAACTGCAGAATCTTCTCACCGT
CAGGCTCCACGATCTCGCTCCGATCGATGTCCTCAAAATGCGATTCGCCATAGCTCTGCTTCCCAACCCCAAAGCCCTGA
TCATGGACGAACCGCTCCAGACACTCGATCGATCGGGCACGAATTGGATCTGCGAGCAGATACGGAAGCAGGCGAATCGT
GGCGTTGCGGTGCTCATCGCATCCGAACCGGACAGCAGGCTGAGGCCGATTACCGATGACGTTGTGGTACTGGATAAAGG
CACCGTGGTAAAAGAGGGCTCCCGCGGCCAGCTTTGGAAGGAAGACTGA

Upstream 100 bases:

>100_bases
CAGGTCAATCGAAGAAAGGAAAACGATGTGCCAGCTGCCCGATTCGGCTTCACCCATCATCGCGTTTGAGAATGTCTCAT
TCAGCCATGCCGGCCGCGAA

Downstream 100 bases:

>100_bases
AAAACGCCAGCGGATCACCCGCTTCCCTAAGGTCCATGTGTTTGGTGTTTGTCATCCGAAGATGACAAACACCAAACACA
TTCTTGGATGTACCATCCAA

Product: ABC transporter

Products: NA

Alternate protein names: Nodulation ATP-binding protein I [H]

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MHGISFAAYAGRVTVLMGAHDAGKTTVLRMLLGLDIPDSGCISTCGKPYGTSRIPKNVVSAMPEAISLSPYYSAGTYLRW
KALWAGTPDPLLDGIIHMTELQNLLTVRLHDLAPIDVLKMRFAIALLPNPKALIMDEPLQTLDRSGTNWICEQIRKQANR
GVAVLIASEPDSRLRPITDDVVVLDKGTVVKEGSRGQLWKED

Sequences:

>Translated_202_residues
MHGISFAAYAGRVTVLMGAHDAGKTTVLRMLLGLDIPDSGCISTCGKPYGTSRIPKNVVSAMPEAISLSPYYSAGTYLRW
KALWAGTPDPLLDGIIHMTELQNLLTVRLHDLAPIDVLKMRFAIALLPNPKALIMDEPLQTLDRSGTNWICEQIRKQANR
GVAVLIASEPDSRLRPITDDVVVLDKGTVVKEGSRGQLWKED
>Mature_202_residues
MHGISFAAYAGRVTVLMGAHDAGKTTVLRMLLGLDIPDSGCISTCGKPYGTSRIPKNVVSAMPEAISLSPYYSAGTYLRW
KALWAGTPDPLLDGIIHMTELQNLLTVRLHDLAPIDVLKMRFAIALLPNPKALIMDEPLQTLDRSGTNWICEQIRKQANR
GVAVLIASEPDSRLRPITDDVVVLDKGTVVKEGSRGQLWKED

Specific function: Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modifi

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI87081709, Length=196, Percent_Identity=25.5102040816327, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI87081791, Length=208, Percent_Identity=23.5576923076923, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015851
- InterPro:   IPR005978
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: 3.6.3.30 [C]

Molecular weight: Translated: 22076; Mature: 22076

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGISFAAYAGRVTVLMGAHDAGKTTVLRMLLGLDIPDSGCISTCGKPYGTSRIPKNVVS
CCCCCCEECCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHH
AMPEAISLSPYYSAGTYLRWKALWAGTPDPLLDGIIHMTELQNLLTVRLHDLAPIDVLKM
HCCHHEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RFAIALLPNPKALIMDEPLQTLDRSGTNWICEQIRKQANRGVAVLIASEPDSRLRPITDD
HHHEEECCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC
VVVLDKGTVVKEGSRGQLWKED
EEEEECCCEEECCCCCCCCCCC
>Mature Secondary Structure
MHGISFAAYAGRVTVLMGAHDAGKTTVLRMLLGLDIPDSGCISTCGKPYGTSRIPKNVVS
CCCCCCEECCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHH
AMPEAISLSPYYSAGTYLRWKALWAGTPDPLLDGIIHMTELQNLLTVRLHDLAPIDVLKM
HCCHHEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RFAIALLPNPKALIMDEPLQTLDRSGTNWICEQIRKQANRGVAVLIASEPDSRLRPITDD
HHHEEECCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC
VVVLDKGTVVKEGSRGQLWKED
EEEEECCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA