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The map label for this gene is yxjL [H]

Identifier: 213691387

GI number: 213691387

Start: 551474

End: 552181

Strand: Reverse

Name: yxjL [H]

Synonym: Blon_0481

Alternate gene names: 213691387

Gene position: 552181-551474 (Counterclockwise)

Preceding gene: 213691388

Following gene: 213691386

Centisome position: 19.49

GC content: 56.07

Gene sequence:

>708_bases
ATGAAGGATGCAAGAGACGACATCATCAAGGTCATGCTGGTCGATGACATGCGAGGGGCGCGCACCGGCTTCATGATGAT
GCTGAACAACGATCCGAACATCATCGTCAGCTCACAGGCCGCGGACGGCGCCCAAGCAATCGAATTCCTACGGCAATCAC
CGCAGCAACTGCCTGACGTGATTCTGATGGACGTGCGCATGCCCGTCATGGACGGCATAGAGGCGACGGGCATCATCAAG
GAGCAATTCCCCCAAATCCAGATACTGATCCTGACCACATACGATGAGGACGATTACGCCTTCGACGGATTGGCGCGAGG
GGCATCCGGATTCCTGCTCAAGGATGCGACCCCCAAACAGCTACGTGACGCCGTACACGCCGTGTATAACGGAGATGCGG
TATTGACACCGAGAATCACCGGTGAAGTGCTCAATCGCGGGGTTCGGCCCATATCGGACAACACCCGCATCAAGCTGCTG
CGAAGCCTATTCGACGGACTTTCCAAGCGGGAATATGAAGTCGCGGAACTCGTGGCGGCAGGCTTGTCCAATCAGGAAAT
CGCCGAACACTTGTTCATCGAAACGACATCGGTACGGCGCACGGTAAGCCGCATATTGGCCAGAATGCACATGCGGGACC
GAGTCCAAATCGCCATAGCCTGGTATCAATCGGGGCTGGACCAAATAACAGGCGGCAAACCAGCATAA

Upstream 100 bases:

>100_bases
TCCCAACGCCTTGCGAAAATGGGCGGCACCCTGTCCTATGGGCCATACGGCAATGGCTGGGCGGTCAAGGCACTAGTCCC
CTGAAAGAAACGGAAGAACC

Downstream 100 bases:

>100_bases
AGATCACGATATTCATCTCAACGATTGTGCTGTTTGTCATCTTCAGATGACAAACAGCACAATCGTTTTACTGGAGAATA
GAGCGAACTGGTTAACTGTA

Product: two component transcriptional regulator, LuxR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKDARDDIIKVMLVDDMRGARTGFMMMLNNDPNIIVSSQAADGAQAIEFLRQSPQQLPDVILMDVRMPVMDGIEATGIIK
EQFPQIQILILTTYDEDDYAFDGLARGASGFLLKDATPKQLRDAVHAVYNGDAVLTPRITGEVLNRGVRPISDNTRIKLL
RSLFDGLSKREYEVAELVAAGLSNQEIAEHLFIETTSVRRTVSRILARMHMRDRVQIAIAWYQSGLDQITGGKPA

Sequences:

>Translated_235_residues
MKDARDDIIKVMLVDDMRGARTGFMMMLNNDPNIIVSSQAADGAQAIEFLRQSPQQLPDVILMDVRMPVMDGIEATGIIK
EQFPQIQILILTTYDEDDYAFDGLARGASGFLLKDATPKQLRDAVHAVYNGDAVLTPRITGEVLNRGVRPISDNTRIKLL
RSLFDGLSKREYEVAELVAAGLSNQEIAEHLFIETTSVRRTVSRILARMHMRDRVQIAIAWYQSGLDQITGGKPA
>Mature_235_residues
MKDARDDIIKVMLVDDMRGARTGFMMMLNNDPNIIVSSQAADGAQAIEFLRQSPQQLPDVILMDVRMPVMDGIEATGIIK
EQFPQIQILILTTYDEDDYAFDGLARGASGFLLKDATPKQLRDAVHAVYNGDAVLTPRITGEVLNRGVRPISDNTRIKLL
RSLFDGLSKREYEVAELVAAGLSNQEIAEHLFIETTSVRRTVSRILARMHMRDRVQIAIAWYQSGLDQITGGKPA

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=215, Percent_Identity=31.6279069767442, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1788222, Length=219, Percent_Identity=27.3972602739726, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1790102, Length=212, Percent_Identity=29.7169811320755, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1787473, Length=213, Percent_Identity=31.4553990610329, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1786747, Length=207, Percent_Identity=25.6038647342995, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 26174; Mature: 26174

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDARDDIIKVMLVDDMRGARTGFMMMLNNDPNIIVSSQAADGAQAIEFLRQSPQQLPDV
CCCCHHHHEEEEEECCCCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHCHHHCHHH
ILMDVRMPVMDGIEATGIIKEQFPQIQILILTTYDEDDYAFDGLARGASGFLLKDATPKQ
EEHHCCCHHHCCCCCCCHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCCCEECCCCHHH
LRDAVHAVYNGDAVLTPRITGEVLNRGVRPISDNTRIKLLRSLFDGLSKREYEVAELVAA
HHHHHHHHHCCCEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
GLSNQEIAEHLFIETTSVRRTVSRILARMHMRDRVQIAIAWYQSGLDQITGGKPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCHHHCCCCCCC
>Mature Secondary Structure
MKDARDDIIKVMLVDDMRGARTGFMMMLNNDPNIIVSSQAADGAQAIEFLRQSPQQLPDV
CCCCHHHHEEEEEECCCCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHCHHHCHHH
ILMDVRMPVMDGIEATGIIKEQFPQIQILILTTYDEDDYAFDGLARGASGFLLKDATPKQ
EEHHCCCHHHCCCCCCCHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCCCEECCCCHHH
LRDAVHAVYNGDAVLTPRITGEVLNRGVRPISDNTRIKLLRSLFDGLSKREYEVAELVAA
HHHHHHHHHCCCEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
GLSNQEIAEHLFIETTSVRRTVSRILARMHMRDRVQIAIAWYQSGLDQITGGKPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]