| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691372
Identifier: 213691372
GI number: 213691372
Start: 535539
End: 535937
Strand: Reverse
Name: 213691372
Synonym: Blon_0466
Alternate gene names: NA
Gene position: 535937-535539 (Counterclockwise)
Preceding gene: 213691373
Following gene: 213691371
Centisome position: 18.92
GC content: 64.16
Gene sequence:
>399_bases ATGCCTGTCCGATACACGGCAATGCCGAGGCGCGCCCCGGCATCCATGCTGCTCGCGTTCTTGCTGATTTTGACGGCCTT GTTCGGGCTGGCGGCGTGTGGCTCCGTCCAAGGCTCCTGGCCTGACGGCCAGTATGCCGGCCGGGTGCCCGAACCCGACC GGGTGACGACCCGCATCAGGGACGAGACCGACAACGGCTACCTGATCGACGTGTCATGGACCATCGCCGAAGCGAAGGAC TACGCGCGAAAGATCAAGGACGCGGGCTTCACCCGCAACGCCACCGAGGAGGAACAGGCCGGCGTATACGACTACACGGC CGACGACGGCACCGTCAAGGTCTCCATCAGCGCATTGCCCGGCGACAACGGCGCCATCAACATCAACAAGCTCCAATGA
Upstream 100 bases:
>100_bases CCTCATCCAGTACATGCAGATCCGGCCCGCGTTGCGCCGCAGCGTGGCCGACGCGATCAGAAGCCGTTGACGGCATCAGA TTCGGAAAAGGAGGATGATC
Downstream 100 bases:
>100_bases CATTCAAAAGGATCGGCACTCATGGACATTCCCGCACATCACGAACCGTCACCCGGCAAGCCCCTGCCGGCGCCATCGCC CGTCCCGGAGCCCGGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MPVRYTAMPRRAPASMLLAFLLILTALFGLAACGSVQGSWPDGQYAGRVPEPDRVTTRIRDETDNGYLIDVSWTIAEAKD YARKIKDAGFTRNATEEEQAGVYDYTADDGTVKVSISALPGDNGAININKLQ
Sequences:
>Translated_132_residues MPVRYTAMPRRAPASMLLAFLLILTALFGLAACGSVQGSWPDGQYAGRVPEPDRVTTRIRDETDNGYLIDVSWTIAEAKD YARKIKDAGFTRNATEEEQAGVYDYTADDGTVKVSISALPGDNGAININKLQ >Mature_131_residues PVRYTAMPRRAPASMLLAFLLILTALFGLAACGSVQGSWPDGQYAGRVPEPDRVTTRIRDETDNGYLIDVSWTIAEAKDY ARKIKDAGFTRNATEEEQAGVYDYTADDGTVKVSISALPGDNGAININKLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14357; Mature: 14226
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRYTAMPRRAPASMLLAFLLILTALFGLAACGSVQGSWPDGQYAGRVPEPDRVTTRIR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEE DETDNGYLIDVSWTIAEAKDYARKIKDAGFTRNATEEEQAGVYDYTADDGTVKVSISALP CCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEECCCCEEEEEEEECC GDNGAININKLQ CCCCEEEEEECC >Mature Secondary Structure PVRYTAMPRRAPASMLLAFLLILTALFGLAACGSVQGSWPDGQYAGRVPEPDRVTTRIR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEE DETDNGYLIDVSWTIAEAKDYARKIKDAGFTRNATEEEQAGVYDYTADDGTVKVSISALP CCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEECCCCEEEEEEEECC GDNGAININKLQ CCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA