| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691373
Identifier: 213691373
GI number: 213691373
Start: 535968
End: 537392
Strand: Reverse
Name: 213691373
Synonym: Blon_0467
Alternate gene names: NA
Gene position: 537392-535968 (Counterclockwise)
Preceding gene: 213691374
Following gene: 213691372
Centisome position: 18.97
GC content: 68.77
Gene sequence:
>1425_bases GTGGGTAGGTATGTGCTTCGCGTGTTCCGCGATAATCTCGCGGGTTGGGTGCCCACGATCATGGTGGTCGCGGTGGTGAC CACGCTGGTGGGCGTGTGCATGAACCAGTTCGTGTGGACCTCGTCGCCGTCGTTCGCATCGGCCGCCCGGCTGGCGGGTC TGGACCCGGCCGAGTTCGGCATGGTGTCGGCCACGATCTATGTCGTGGTGGCGTTGCTTGCGTTCTTCTCGCTGACGGTG GTCGGTTCGGCCACGGTTGACCGCATCCGCGGCACGTTCGCGCAATGGCGTCTCATGGGCGCCAGTCCGAGCCAGGTGCG CGCGGGCACGTGGATGCTCGTGGGCGTGGCTAGCCTCACCGGCTCGCTGCTCGGCTCACTGCTCGCGATGCCGGCCAGTC TGCTCGCGGTTCCCGAGTTCAACGCGATGGCCGCGGAGAGCTTCGCCGGCGGGCTCGGCTCGTTCGTCCCTCCCGCATTC GCGCCGTCCGCGACGGCATGGCTCGGCTCGCTGCTGCTGGGCATGGCCACGTGCATGCTGGGCGCGTTCGTGCCCTCGAT GCGTGCGGCGAAGGTTCGTCCCATCGAGGCGATCCGTGGCAGGGACGCGCCGATCGGGCGGCATGGATGGCGGTATTGGG CGCGTTGCGCGCTGGGACTGGTCGTCATGGCGGCGGCATTGGCATTGGCGTTCTCCGGCATGGGCATGCCGCGCGCCCAC GCGTTCGGGCAGGAGGCCGGCCAGACGTTCAACGGCGCATTATGGGCCGGGATCATCGCGTCGTTCGGCATGTACGTCCT CACTGGCGTGCTGGTCCCAATCCTGCTGGATGCGGGACGCGCCGTGTGCCGCCTGTGCGGGTCGGCGACCGGCGTGCTCG CGGCCCGTGCCGCCAAGGCGAAGGCCGTGTCCAGTATGAACACCATCGCCCCGCTCGCACTGGCCTTGGGATTGTCCACG ACCCTGCTGACCTGCGCGCGGTCCTACGGGCGGATACTGGCCCTGGGCGGCCATCCGACGAGCCTGAACTACGCGGACTC GCTGCTGATGATCGCGATGCTGTGCATCGTGTCCCTGGCCACGAGTCTGGCCGTCATCGCGTTGTCGAACCGTGGCATGG TCGCCGATCAGGCGCTGCTGCGCAGCATCGGCATGTCGCCGCGCCGGGTGACGCGCATGATCCTGTGGCAGAGCCTGCAC CTGGCCGCCGGCGCGGTCGTCCTCGCGCTCATCCCGGTCGCCGTCAGCTCGCTCGTGCTCGCAACACGCTCTATCACGCT CGTCGGCGTTCCAGTGGCCGGGATCCCGTGGGCTGGTGTGATCGGCGCGGGAGCGGCCTGCTGGCTGGCGTTGTTCCTCA TCCAGTACATGCAGATCCGGCCCGCGTTGCGCCGCAGCGTGGCCGACGCGATCAGAAGCCGTTGA
Upstream 100 bases:
>100_bases ATCACCCACATCGCGGGCAGACTGACCGCTGGGCAGATCGTCGAGGGCATGCGCCGCACGTTCGAGCCGGCCATGCCGCA GCACGGTCAGGAGGCCCGTC
Downstream 100 bases:
>100_bases CGGCATCAGATTCGGAAAAGGAGGATGATCATGCCTGTCCGATACACGGCAATGCCGAGGCGCGCCCCGGCATCCATGCT GCTCGCGTTCTTGCTGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein Release ABC Transporter Permease
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MGRYVLRVFRDNLAGWVPTIMVVAVVTTLVGVCMNQFVWTSSPSFASAARLAGLDPAEFGMVSATIYVVVALLAFFSLTV VGSATVDRIRGTFAQWRLMGASPSQVRAGTWMLVGVASLTGSLLGSLLAMPASLLAVPEFNAMAAESFAGGLGSFVPPAF APSATAWLGSLLLGMATCMLGAFVPSMRAAKVRPIEAIRGRDAPIGRHGWRYWARCALGLVVMAAALALAFSGMGMPRAH AFGQEAGQTFNGALWAGIIASFGMYVLTGVLVPILLDAGRAVCRLCGSATGVLAARAAKAKAVSSMNTIAPLALALGLST TLLTCARSYGRILALGGHPTSLNYADSLLMIAMLCIVSLATSLAVIALSNRGMVADQALLRSIGMSPRRVTRMILWQSLH LAAGAVVLALIPVAVSSLVLATRSITLVGVPVAGIPWAGVIGAGAACWLALFLIQYMQIRPALRRSVADAIRSR
Sequences:
>Translated_474_residues MGRYVLRVFRDNLAGWVPTIMVVAVVTTLVGVCMNQFVWTSSPSFASAARLAGLDPAEFGMVSATIYVVVALLAFFSLTV VGSATVDRIRGTFAQWRLMGASPSQVRAGTWMLVGVASLTGSLLGSLLAMPASLLAVPEFNAMAAESFAGGLGSFVPPAF APSATAWLGSLLLGMATCMLGAFVPSMRAAKVRPIEAIRGRDAPIGRHGWRYWARCALGLVVMAAALALAFSGMGMPRAH AFGQEAGQTFNGALWAGIIASFGMYVLTGVLVPILLDAGRAVCRLCGSATGVLAARAAKAKAVSSMNTIAPLALALGLST TLLTCARSYGRILALGGHPTSLNYADSLLMIAMLCIVSLATSLAVIALSNRGMVADQALLRSIGMSPRRVTRMILWQSLH LAAGAVVLALIPVAVSSLVLATRSITLVGVPVAGIPWAGVIGAGAACWLALFLIQYMQIRPALRRSVADAIRSR >Mature_473_residues GRYVLRVFRDNLAGWVPTIMVVAVVTTLVGVCMNQFVWTSSPSFASAARLAGLDPAEFGMVSATIYVVVALLAFFSLTVV GSATVDRIRGTFAQWRLMGASPSQVRAGTWMLVGVASLTGSLLGSLLAMPASLLAVPEFNAMAAESFAGGLGSFVPPAFA PSATAWLGSLLLGMATCMLGAFVPSMRAAKVRPIEAIRGRDAPIGRHGWRYWARCALGLVVMAAALALAFSGMGMPRAHA FGQEAGQTFNGALWAGIIASFGMYVLTGVLVPILLDAGRAVCRLCGSATGVLAARAAKAKAVSSMNTIAPLALALGLSTT LLTCARSYGRILALGGHPTSLNYADSLLMIAMLCIVSLATSLAVIALSNRGMVADQALLRSIGMSPRRVTRMILWQSLHL AAGAVVLALIPVAVSSLVLATRSITLVGVPVAGIPWAGVIGAGAACWLALFLIQYMQIRPALRRSVADAIRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49263; Mature: 49132
Theoretical pI: Translated: 11.61; Mature: 11.61
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRYVLRVFRDNLAGWVPTIMVVAVVTTLVGVCMNQFVWTSSPSFASAARLAGLDPAEFG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHH MVSATIYVVVALLAFFSLTVVGSATVDRIRGTFAQWRLMGASPSQVRAGTWMLVGVASLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHCCCHHHHHHHHHHH GSLLGSLLAMPASLLAVPEFNAMAAESFAGGLGSFVPPAFAPSATAWLGSLLLGMATCML HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH GAFVPSMRAAKVRPIEAIRGRDAPIGRHGWRYWARCALGLVVMAAALALAFSGMGMPRAH HHHHCCHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AFGQEAGQTFNGALWAGIIASFGMYVLTGVLVPILLDAGRAVCRLCGSATGVLAARAAKA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH KAVSSMNTIAPLALALGLSTTLLTCARSYGRILALGGHPTSLNYADSLLMIAMLCIVSLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH TSLAVIALSNRGMVADQALLRSIGMSPRRVTRMILWQSLHLAAGAVVLALIPVAVSSLVL HHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATRSITLVGVPVAGIPWAGVIGAGAACWLALFLIQYMQIRPALRRSVADAIRSR HHHCEEEEECCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GRYVLRVFRDNLAGWVPTIMVVAVVTTLVGVCMNQFVWTSSPSFASAARLAGLDPAEFG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHH MVSATIYVVVALLAFFSLTVVGSATVDRIRGTFAQWRLMGASPSQVRAGTWMLVGVASLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHCCCHHHHHHHHHHH GSLLGSLLAMPASLLAVPEFNAMAAESFAGGLGSFVPPAFAPSATAWLGSLLLGMATCML HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH GAFVPSMRAAKVRPIEAIRGRDAPIGRHGWRYWARCALGLVVMAAALALAFSGMGMPRAH HHHHCCHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AFGQEAGQTFNGALWAGIIASFGMYVLTGVLVPILLDAGRAVCRLCGSATGVLAARAAKA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH KAVSSMNTIAPLALALGLSTTLLTCARSYGRILALGGHPTSLNYADSLLMIAMLCIVSLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH TSLAVIALSNRGMVADQALLRSIGMSPRRVTRMILWQSLHLAAGAVVLALIPVAVSSLVL HHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATRSITLVGVPVAGIPWAGVIGAGAACWLALFLIQYMQIRPALRRSVADAIRSR HHHCEEEEECCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA