| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691371
Identifier: 213691371
GI number: 213691371
Start: 535155
End: 535517
Strand: Reverse
Name: 213691371
Synonym: Blon_0465
Alternate gene names: NA
Gene position: 535517-535155 (Counterclockwise)
Preceding gene: 213691372
Following gene: 213691370
Centisome position: 18.9
GC content: 68.32
Gene sequence:
>363_bases ATGGACATTCCCGCACATCACGAACCGTCACCCGGCAAGCCCCTGCCGGCGCCATCGCCCGTCCCGGAGCCCGGCCGGCC GAATCCGCCCCGACCATTGCCAGCCGCGACCGCGCCGAACGATTCGATCGTCGGGTTCCTGTTGCTTGGCCTGTTCCTGT CCCTGCCCGGCGTGCTGATCGCGTGGATCACCGGCCACGACGGGCACGGATGGGAGCATGGCGGCCGTGTCGCCGCATGG ATCGGGGCGCTGCTCTCGCCGTTCGTATGGCTGGCCATCATCATCGTGTTCACTGTGCTGTTCACCGGTTCGGTCACGAT GCTCGGCTGCCTGATGCCCGGCGCGGACTGCCTCGCCCAGTGA
Upstream 100 bases:
>100_bases CGACGACGGCACCGTCAAGGTCTCCATCAGCGCATTGCCCGGCGACAACGGCGCCATCAACATCAACAAGCTCCAATGAC ATTCAAAAGGATCGGCACTC
Downstream 100 bases:
>100_bases ACACGCCGATGACCCTGCGAGGTGGCACAGTGGATCGTATGGAGCGGCAAACGGTGAACGTCGGCAGGGTCACTGCCATA GCCATGCCATTATGCGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MDIPAHHEPSPGKPLPAPSPVPEPGRPNPPRPLPAATAPNDSIVGFLLLGLFLSLPGVLIAWITGHDGHGWEHGGRVAAW IGALLSPFVWLAIIIVFTVLFTGSVTMLGCLMPGADCLAQ
Sequences:
>Translated_120_residues MDIPAHHEPSPGKPLPAPSPVPEPGRPNPPRPLPAATAPNDSIVGFLLLGLFLSLPGVLIAWITGHDGHGWEHGGRVAAW IGALLSPFVWLAIIIVFTVLFTGSVTMLGCLMPGADCLAQ >Mature_120_residues MDIPAHHEPSPGKPLPAPSPVPEPGRPNPPRPLPAATAPNDSIVGFLLLGLFLSLPGVLIAWITGHDGHGWEHGGRVAAW IGALLSPFVWLAIIIVFTVLFTGSVTMLGCLMPGADCLAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12522; Mature: 12522
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIPAHHEPSPGKPLPAPSPVPEPGRPNPPRPLPAATAPNDSIVGFLLLGLFLSLPGVLI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AWITGHDGHGWEHGGRVAAWIGALLSPFVWLAIIIVFTVLFTGSVTMLGCLMPGADCLAQ HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHCC >Mature Secondary Structure MDIPAHHEPSPGKPLPAPSPVPEPGRPNPPRPLPAATAPNDSIVGFLLLGLFLSLPGVLI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AWITGHDGHGWEHGGRVAAWIGALLSPFVWLAIIIVFTVLFTGSVTMLGCLMPGADCLAQ HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA