| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691370
Identifier: 213691370
GI number: 213691370
Start: 533884
End: 535146
Strand: Reverse
Name: 213691370
Synonym: Blon_0464
Alternate gene names: NA
Gene position: 535146-533884 (Counterclockwise)
Preceding gene: 213691371
Following gene: 213691369
Centisome position: 18.89
GC content: 64.61
Gene sequence:
>1263_bases ATGACCCTGCGAGGTGGCACAGTGGATCGTATGGAGCGGCAAACGGTGAACGTCGGCAGGGTCACTGCCATAGCCATGCC ATTATGCGTGCTCGCGGTCGAGATGGCGATGCTCACGTGGGAGCGCATGATCGGCGCCCCATTGGATCCGATGTACACGC TCGCCAAGCAGACCGGCGGATTCATAATGCTGCTGCTGTTCCAGCTCCTGTCATGCCTGGCATTGGTGTTCCGTTACCGG GCCCCGTCCGCCACGTTGGCATCGCAGCTCATCCTGACCCTGGTCCTGTCCTTCTGGCATGCGGACTCGATCCTGCTGGT CCAACTGGTCGCGGCGTTCTACGCGTTCATGCGTACGGCCGGGGAACGCCGCATGTACATCGGGTCCCTCGTGACGACGT TGACCGTGACTTTGGCGACGTTCATGTCATGGCCCGCCAGCCGGTTCCTCGGCGAATGGCCCGGCCGCATCCTCCTGCTC GCCCTCGCCGGCGCGATCGCCCTGGCACGCCGCGGCATGGTCCAAGCCAGGAACGCCACGGCCGCCGCCGGCCTGGAACA CCGGCGCGCGCAGACCGCCGCCAAGCAGCGTGACGCAGCCGTGCGTCGTTCGCGCATCGCCGGACAATTGCACGACAGCG TGGGGCACGGGTTGACCGCGATCATCGCCCTATCCGAAGGATTGACCGGTAAGACCGGCGACTCGCGCGTGGAGGAGGCT CTGAAGGGCATCAACGAGATCGCACGGGAAAGCCTGGAGGACACGCGCAAGGCCGTGCGCGCACTGACCGAAACCGACAC GACCGACGAAGACGAGGATCCCGCCGAACCAGGCTCCCGGAGCATGCGTTCATGGGATGACATCCGTCCGATCCTCGCAC ACGCCCGCACGCTCGACATCATCACCATATTCACCGAAACCGGCGTCCGCAACGACGACGAACCCCAGGCGGACCTCTGC TTCGACGTGACCCGCGAGGCCATAACCAACGCCATCCGCCACTGCAGACACGTCACGCATCTCAACGTCTCATGGAACCA CCAGCCCAACGGAGTCACCGTCATCGTCCGCAACGACGGAGCCACCGGTGCGGCGCAAGCTATCGCACCCGATGACGGCA CCGGACTGGACAGACTGTCACGGCGCGTACGGGACGTTGGCGGCACGTTCGCCTATGGGCCGGTCAATGGCACCGAATGG CAGGTCAAAGCGGTCATTCCCCCGACCGGGAAACAACCGACTGAAAGGAAGGTCCGACCATGA
Upstream 100 bases:
>100_bases TGGCCATCATCATCGTGTTCACTGTGCTGTTCACCGGTTCGGTCACGATGCTCGGCTGCCTGATGCCCGGCGCGGACTGC CTCGCCCAGTGAACACGCCG
Downstream 100 bases:
>100_bases TCCGTGTGATGCTCGTGGACGACCAGAGACTGGCACGACTCGGCTTCCAGCTCATGCTCGACGACGTGACCGACATCACC GTCATCGCCTCGGCGGAGAA
Product: histidine kinase, dimerisation and phosphoacceptor region
Products: NA
Alternate protein names: Two-Component System Sensor Kinase; Histidine Kinase Dimerisation And Phosphoacceptor Region; Sensor Signal Transduction Histidine Kinase; Signal Transduction Histidine Kinase; Two Component Sensor Kinase
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MTLRGGTVDRMERQTVNVGRVTAIAMPLCVLAVEMAMLTWERMIGAPLDPMYTLAKQTGGFIMLLLFQLLSCLALVFRYR APSATLASQLILTLVLSFWHADSILLVQLVAAFYAFMRTAGERRMYIGSLVTTLTVTLATFMSWPASRFLGEWPGRILLL ALAGAIALARRGMVQARNATAAAGLEHRRAQTAAKQRDAAVRRSRIAGQLHDSVGHGLTAIIALSEGLTGKTGDSRVEEA LKGINEIARESLEDTRKAVRALTETDTTDEDEDPAEPGSRSMRSWDDIRPILAHARTLDIITIFTETGVRNDDEPQADLC FDVTREAITNAIRHCRHVTHLNVSWNHQPNGVTVIVRNDGATGAAQAIAPDDGTGLDRLSRRVRDVGGTFAYGPVNGTEW QVKAVIPPTGKQPTERKVRP
Sequences:
>Translated_420_residues MTLRGGTVDRMERQTVNVGRVTAIAMPLCVLAVEMAMLTWERMIGAPLDPMYTLAKQTGGFIMLLLFQLLSCLALVFRYR APSATLASQLILTLVLSFWHADSILLVQLVAAFYAFMRTAGERRMYIGSLVTTLTVTLATFMSWPASRFLGEWPGRILLL ALAGAIALARRGMVQARNATAAAGLEHRRAQTAAKQRDAAVRRSRIAGQLHDSVGHGLTAIIALSEGLTGKTGDSRVEEA LKGINEIARESLEDTRKAVRALTETDTTDEDEDPAEPGSRSMRSWDDIRPILAHARTLDIITIFTETGVRNDDEPQADLC FDVTREAITNAIRHCRHVTHLNVSWNHQPNGVTVIVRNDGATGAAQAIAPDDGTGLDRLSRRVRDVGGTFAYGPVNGTEW QVKAVIPPTGKQPTERKVRP >Mature_419_residues TLRGGTVDRMERQTVNVGRVTAIAMPLCVLAVEMAMLTWERMIGAPLDPMYTLAKQTGGFIMLLLFQLLSCLALVFRYRA PSATLASQLILTLVLSFWHADSILLVQLVAAFYAFMRTAGERRMYIGSLVTTLTVTLATFMSWPASRFLGEWPGRILLLA LAGAIALARRGMVQARNATAAAGLEHRRAQTAAKQRDAAVRRSRIAGQLHDSVGHGLTAIIALSEGLTGKTGDSRVEEAL KGINEIARESLEDTRKAVRALTETDTTDEDEDPAEPGSRSMRSWDDIRPILAHARTLDIITIFTETGVRNDDEPQADLCF DVTREAITNAIRHCRHVTHLNVSWNHQPNGVTVIVRNDGATGAAQAIAPDDGTGLDRLSRRVRDVGGTFAYGPVNGTEWQ VKAVIPPTGKQPTERKVRP
Specific function: Unknown
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45914; Mature: 45783
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRGGTVDRMERQTVNVGRVTAIAMPLCVLAVEMAMLTWERMIGAPLDPMYTLAKQTGG CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC FIMLLLFQLLSCLALVFRYRAPSATLASQLILTLVLSFWHADSILLVQLVAAFYAFMRTA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC GERRMYIGSLVTTLTVTLATFMSWPASRFLGEWPGRILLLALAGAIALARRGMVQARNAT CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHCCCH AAAGLEHRRAQTAAKQRDAAVRRSRIAGQLHDSVGHGLTAIIALSEGLTGKTGDSRVEEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEHHHHCCCCCCCCHHHHHHH LKGINEIARESLEDTRKAVRALTETDTTDEDEDPAEPGSRSMRSWDDIRPILAHARTLDI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHE ITIFTETGVRNDDEPQADLCFDVTREAITNAIRHCRHVTHLNVSWNHQPNGVTVIVRNDG EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEECCC ATGAAQAIAPDDGTGLDRLSRRVRDVGGTFAYGPVNGTEWQVKAVIPPTGKQPTERKVRP CCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure TLRGGTVDRMERQTVNVGRVTAIAMPLCVLAVEMAMLTWERMIGAPLDPMYTLAKQTGG CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC FIMLLLFQLLSCLALVFRYRAPSATLASQLILTLVLSFWHADSILLVQLVAAFYAFMRTA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC GERRMYIGSLVTTLTVTLATFMSWPASRFLGEWPGRILLLALAGAIALARRGMVQARNAT CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHCCCH AAAGLEHRRAQTAAKQRDAAVRRSRIAGQLHDSVGHGLTAIIALSEGLTGKTGDSRVEEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEHHHHCCCCCCCCHHHHHHH LKGINEIARESLEDTRKAVRALTETDTTDEDEDPAEPGSRSMRSWDDIRPILAHARTLDI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHE ITIFTETGVRNDDEPQADLCFDVTREAITNAIRHCRHVTHLNVSWNHQPNGVTVIVRNDG EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEECCC ATGAAQAIAPDDGTGLDRLSRRVRDVGGTFAYGPVNGTEWQVKAVIPPTGKQPTERKVRP CCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA