| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691347
Identifier: 213691347
GI number: 213691347
Start: 506400
End: 507017
Strand: Direct
Name: 213691347
Synonym: Blon_0438
Alternate gene names: NA
Gene position: 506400-507017 (Clockwise)
Preceding gene: 213691346
Following gene: 213691348
Centisome position: 17.88
GC content: 63.92
Gene sequence:
>618_bases GTGGCGGCGGATCGGACGGGCCGCCTCGTTCTTGGGCCACAGGCGTTCTGGTCCCAGCACGTCAACAGCTTTGCCGAGGT GCTGCTGCCACGCCACATGGGCGGCGACAGCATGGTCAACCCGCCCCAGCGGTTGGGTTACAAACGGTTCGGCAACGACA TGCTGCTCGACTTCTACAAGGCCGAACGCGACGCCATCGAAGCAATCTGCCCCGGCAAGCCGTGGTACATGATGGAGCAC TCCACCTCCGCCGTACAATGGAAGCCGTTGAACACGCGCAAGCGCGCCGGTGAACTTTGGGAGCTCGACGGCGTCCCCGC CATCACCAGTCACCCCCCCACGGCCAAGGCGCCGCCATCTACGTGGGCTGCGACCTTGGCCGCCACGACATCACCCACTT GCTCACAGAACTCAACACAACAGCCCCCTCCGACGAAAGGGCTCCCGACCAAAGGCCGGGTGGGGGAGAGATCAACGCCG CAACCACGACCGCAGCAGCCACGACTCATGACCCCCCGCATCCTGCACACCATCCGCCAATCCTCAGACGGCACCATCCG CTTCGGTTTCTCTCTGAACCGTTCGAAGCAGCCCGTTGCCGTCAACGGCATTGAGTAA
Upstream 100 bases:
>100_bases AGCCGCGGGCCCGTCTCTTCACGTTCCGGATGACGCTGTCGGCGTCCTCGAGGACGGCGTTGGTGTACGGGTGCTCGAAG TATGCGACGATCTCGGCGAA
Downstream 100 bases:
>100_bases GAGCCAATCATCGCCTGCCGGTGCGAACCCGGTCTAGACGATTTCATTGCCGGGAACGCCGGCCCCACCGGCTACGAGCT GGCCCGCAACGCCATTCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Galactosidase I; B-Galactosidase; Type II Restriction- System Restriction Subunit
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MAADRTGRLVLGPQAFWSQHVNSFAEVLLPRHMGGDSMVNPPQRLGYKRFGNDMLLDFYKAERDAIEAICPGKPWYMMEH STSAVQWKPLNTRKRAGELWELDGVPAITSHPPTAKAPPSTWAATLAATTSPTCSQNSTQQPPPTKGLPTKGRVGERSTP QPRPQQPRLMTPRILHTIRQSSDGTIRFGFSLNRSKQPVAVNGIE
Sequences:
>Translated_205_residues MAADRTGRLVLGPQAFWSQHVNSFAEVLLPRHMGGDSMVNPPQRLGYKRFGNDMLLDFYKAERDAIEAICPGKPWYMMEH STSAVQWKPLNTRKRAGELWELDGVPAITSHPPTAKAPPSTWAATLAATTSPTCSQNSTQQPPPTKGLPTKGRVGERSTP QPRPQQPRLMTPRILHTIRQSSDGTIRFGFSLNRSKQPVAVNGIE >Mature_204_residues AADRTGRLVLGPQAFWSQHVNSFAEVLLPRHMGGDSMVNPPQRLGYKRFGNDMLLDFYKAERDAIEAICPGKPWYMMEHS TSAVQWKPLNTRKRAGELWELDGVPAITSHPPTAKAPPSTWAATLAATTSPTCSQNSTQQPPPTKGLPTKGRVGERSTPQ PRPQQPRLMTPRILHTIRQSSDGTIRFGFSLNRSKQPVAVNGIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.23
Molecular weight: Translated: 22664; Mature: 22533
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADRTGRLVLGPQAFWSQHVNSFAEVLLPRHMGGDSMVNPPQRLGYKRFGNDMLLDFYK CCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHH AERDAIEAICPGKPWYMMEHSTSAVQWKPLNTRKRAGELWELDGVPAITSHPPTAKAPPS HHHHHHHHHCCCCCEEEEECCCCEEEEECCCCHHHCCCEEECCCCCCCCCCCCCCCCCCC TWAATLAATTSPTCSQNSTQQPPPTKGLPTKGRVGERSTPQPRPQQPRLMTPRILHTIRQ HHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC SSDGTIRFGFSLNRSKQPVAVNGIE CCCCEEEEEEEECCCCCCEEECCCC >Mature Secondary Structure AADRTGRLVLGPQAFWSQHVNSFAEVLLPRHMGGDSMVNPPQRLGYKRFGNDMLLDFYK CCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHH AERDAIEAICPGKPWYMMEHSTSAVQWKPLNTRKRAGELWELDGVPAITSHPPTAKAPPS HHHHHHHHHCCCCCEEEEECCCCEEEEECCCCHHHCCCEEECCCCCCCCCCCCCCCCCCC TWAATLAATTSPTCSQNSTQQPPPTKGLPTKGRVGERSTPQPRPQQPRLMTPRILHTIRQ HHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC SSDGTIRFGFSLNRSKQPVAVNGIE CCCCEEEEEEEECCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA