| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yfeJ [H]
Identifier: 213691307
GI number: 213691307
Start: 456093
End: 456821
Strand: Direct
Name: yfeJ [H]
Synonym: Blon_0394
Alternate gene names: 213691307
Gene position: 456093-456821 (Clockwise)
Preceding gene: 213691305
Following gene: 213691308
Centisome position: 16.1
GC content: 58.3
Gene sequence:
>729_bases ATGGCCACACCACAAGTGCTCATTTTGCAACATGTCCCATGGGAACGTCCGGGACGCATATTGTCGAACCTCGAAGACAT CGGTCTTGAGACGGTGACGATGAATATCGTCGACAAAAAGAAACCGGACTTGCCTGATTTCGGCGAACTGGCTGGCGTGG TAATCATGGGTGGACCTATGGGCGCGCTTGATTACGACAAGTATCCGGGGCTGAAGGCGGAAGCCAAGTTGGCGCGTGCC GCTGTGGCTTCAGGCAAGCCGATTCTCGGTGTATGCCTGGGGCATCAGATTATCGCCACTGCGCTTGGTGCGCAGCTGCG CAAGGGTGATGCGCCGGAGATTGGGTTCGCGCCGATCAAGCGTGTGGACAAGCATGACTTCTTCTCCATGTGGGATAAGC AGCTGACGGTGCTGCACTGGCATAACGACGTGGTGGGCTTGCCCGAGGGAGGCCAGCTGCTGGCACGTTCGTCTTCCACC AAGGTGCAGGCGTTCCGACTGGGATCCGCGCTGGGCATGCAGTTCCATCTTGAGGTGTGCGGCTCGCTGCTGGACGAATG GCTGGATGAACCGAGCATGGTCAAGGATCTCAAGGCCGCGGGTGGGTCCAAGTCCCAATTGCGCGAGCAGTTCGCCCAAT ACGATCAGCTACTGCATCCGCTCGCCGAGCAAGTGTTCTCCGGTTTTGCGGCCCGCTGCAACTCCTACGCTCAGACGCTG AACAAATAA
Upstream 100 bases:
>100_bases CTCGCGAGAATACGTCTTTGACCGCTGCGGAAACTGCGAGATTCATGGATTTGCCCTGCCTGTTACGCAAACGGGGAACG CTCGTGCCACAATAGAAGTC
Downstream 100 bases:
>100_bases CGTTTGTGGGCCGCCGCTGGGCAAGCGTGGCGCTACATTGGTGAGTCATGCCGACTTATGACATTGGACTGGAACACGTT TCGCTCGCTTTCGCTACCAA
Product: glutamine amidotransferase class-I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MATPQVLILQHVPWERPGRILSNLEDIGLETVTMNIVDKKKPDLPDFGELAGVVIMGGPMGALDYDKYPGLKAEAKLARA AVASGKPILGVCLGHQIIATALGAQLRKGDAPEIGFAPIKRVDKHDFFSMWDKQLTVLHWHNDVVGLPEGGQLLARSSST KVQAFRLGSALGMQFHLEVCGSLLDEWLDEPSMVKDLKAAGGSKSQLREQFAQYDQLLHPLAEQVFSGFAARCNSYAQTL NK
Sequences:
>Translated_242_residues MATPQVLILQHVPWERPGRILSNLEDIGLETVTMNIVDKKKPDLPDFGELAGVVIMGGPMGALDYDKYPGLKAEAKLARA AVASGKPILGVCLGHQIIATALGAQLRKGDAPEIGFAPIKRVDKHDFFSMWDKQLTVLHWHNDVVGLPEGGQLLARSSST KVQAFRLGSALGMQFHLEVCGSLLDEWLDEPSMVKDLKAAGGSKSQLREQFAQYDQLLHPLAEQVFSGFAARCNSYAQTL NK >Mature_241_residues ATPQVLILQHVPWERPGRILSNLEDIGLETVTMNIVDKKKPDLPDFGELAGVVIMGGPMGALDYDKYPGLKAEAKLARAA VASGKPILGVCLGHQIIATALGAQLRKGDAPEIGFAPIKRVDKHDFFSMWDKQLTVLHWHNDVVGLPEGGQLLARSSSTK VQAFRLGSALGMQFHLEVCGSLLDEWLDEPSMVKDLKAAGGSKSQLREQFAQYDQLLHPLAEQVFSGFAARCNSYAQTLN K
Specific function: Unknown
COG id: COG0518
COG function: function code F; GMP synthase - Glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: NA
Molecular weight: Translated: 26371; Mature: 26240
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPQVLILQHVPWERPGRILSNLEDIGLETVTMNIVDKKKPDLPDFGELAGVVIMGGPM CCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEHHCCCCCCCCHHHHCCEEEECCCC GALDYDKYPGLKAEAKLARAAVASGKPILGVCLGHQIIATALGAQLRKGDAPEIGFAPIK CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH RVDKHDFFSMWDKQLTVLHWHNDVVGLPEGGQLLARSSSTKVQAFRLGSALGMQFHLEVC HHHHHHHHHHHHHHEEEEEECCCEECCCCCCCEEECCCCCHHHHHHHHHHHCHHHHHHHH GSLLDEWLDEPSMVKDLKAAGGSKSQLREQFAQYDQLLHPLAEQVFSGFAARCNSYAQTL HHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NK CC >Mature Secondary Structure ATPQVLILQHVPWERPGRILSNLEDIGLETVTMNIVDKKKPDLPDFGELAGVVIMGGPM CCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEHHCCCCCCCCHHHHCCEEEECCCC GALDYDKYPGLKAEAKLARAAVASGKPILGVCLGHQIIATALGAQLRKGDAPEIGFAPIK CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH RVDKHDFFSMWDKQLTVLHWHNDVVGLPEGGQLLARSSSTKVQAFRLGSALGMQFHLEVC HHHHHHHHHHHHHHEEEEEECCCEECCCCCCCEEECCCCCHHHHHHHHHHHCHHHHHHHH GSLLDEWLDEPSMVKDLKAAGGSKSQLREQFAQYDQLLHPLAEQVFSGFAARCNSYAQTL HHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7612925; 11677609 [H]