Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is yfeJ [H]

Identifier: 213691307

GI number: 213691307

Start: 456093

End: 456821

Strand: Direct

Name: yfeJ [H]

Synonym: Blon_0394

Alternate gene names: 213691307

Gene position: 456093-456821 (Clockwise)

Preceding gene: 213691305

Following gene: 213691308

Centisome position: 16.1

GC content: 58.3

Gene sequence:

>729_bases
ATGGCCACACCACAAGTGCTCATTTTGCAACATGTCCCATGGGAACGTCCGGGACGCATATTGTCGAACCTCGAAGACAT
CGGTCTTGAGACGGTGACGATGAATATCGTCGACAAAAAGAAACCGGACTTGCCTGATTTCGGCGAACTGGCTGGCGTGG
TAATCATGGGTGGACCTATGGGCGCGCTTGATTACGACAAGTATCCGGGGCTGAAGGCGGAAGCCAAGTTGGCGCGTGCC
GCTGTGGCTTCAGGCAAGCCGATTCTCGGTGTATGCCTGGGGCATCAGATTATCGCCACTGCGCTTGGTGCGCAGCTGCG
CAAGGGTGATGCGCCGGAGATTGGGTTCGCGCCGATCAAGCGTGTGGACAAGCATGACTTCTTCTCCATGTGGGATAAGC
AGCTGACGGTGCTGCACTGGCATAACGACGTGGTGGGCTTGCCCGAGGGAGGCCAGCTGCTGGCACGTTCGTCTTCCACC
AAGGTGCAGGCGTTCCGACTGGGATCCGCGCTGGGCATGCAGTTCCATCTTGAGGTGTGCGGCTCGCTGCTGGACGAATG
GCTGGATGAACCGAGCATGGTCAAGGATCTCAAGGCCGCGGGTGGGTCCAAGTCCCAATTGCGCGAGCAGTTCGCCCAAT
ACGATCAGCTACTGCATCCGCTCGCCGAGCAAGTGTTCTCCGGTTTTGCGGCCCGCTGCAACTCCTACGCTCAGACGCTG
AACAAATAA

Upstream 100 bases:

>100_bases
CTCGCGAGAATACGTCTTTGACCGCTGCGGAAACTGCGAGATTCATGGATTTGCCCTGCCTGTTACGCAAACGGGGAACG
CTCGTGCCACAATAGAAGTC

Downstream 100 bases:

>100_bases
CGTTTGTGGGCCGCCGCTGGGCAAGCGTGGCGCTACATTGGTGAGTCATGCCGACTTATGACATTGGACTGGAACACGTT
TCGCTCGCTTTCGCTACCAA

Product: glutamine amidotransferase class-I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MATPQVLILQHVPWERPGRILSNLEDIGLETVTMNIVDKKKPDLPDFGELAGVVIMGGPMGALDYDKYPGLKAEAKLARA
AVASGKPILGVCLGHQIIATALGAQLRKGDAPEIGFAPIKRVDKHDFFSMWDKQLTVLHWHNDVVGLPEGGQLLARSSST
KVQAFRLGSALGMQFHLEVCGSLLDEWLDEPSMVKDLKAAGGSKSQLREQFAQYDQLLHPLAEQVFSGFAARCNSYAQTL
NK

Sequences:

>Translated_242_residues
MATPQVLILQHVPWERPGRILSNLEDIGLETVTMNIVDKKKPDLPDFGELAGVVIMGGPMGALDYDKYPGLKAEAKLARA
AVASGKPILGVCLGHQIIATALGAQLRKGDAPEIGFAPIKRVDKHDFFSMWDKQLTVLHWHNDVVGLPEGGQLLARSSST
KVQAFRLGSALGMQFHLEVCGSLLDEWLDEPSMVKDLKAAGGSKSQLREQFAQYDQLLHPLAEQVFSGFAARCNSYAQTL
NK
>Mature_241_residues
ATPQVLILQHVPWERPGRILSNLEDIGLETVTMNIVDKKKPDLPDFGELAGVVIMGGPMGALDYDKYPGLKAEAKLARAA
VASGKPILGVCLGHQIIATALGAQLRKGDAPEIGFAPIKRVDKHDFFSMWDKQLTVLHWHNDVVGLPEGGQLLARSSSTK
VQAFRLGSALGMQFHLEVCGSLLDEWLDEPSMVKDLKAAGGSKSQLREQFAQYDQLLHPLAEQVFSGFAARCNSYAQTLN
K

Specific function: Unknown

COG id: COG0518

COG function: function code F; GMP synthase - Glutamine amidotransferase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR000991 [H]

Pfam domain/function: PF00117 GATase [H]

EC number: NA

Molecular weight: Translated: 26371; Mature: 26240

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS00442 GATASE_TYPE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPQVLILQHVPWERPGRILSNLEDIGLETVTMNIVDKKKPDLPDFGELAGVVIMGGPM
CCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEHHCCCCCCCCHHHHCCEEEECCCC
GALDYDKYPGLKAEAKLARAAVASGKPILGVCLGHQIIATALGAQLRKGDAPEIGFAPIK
CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
RVDKHDFFSMWDKQLTVLHWHNDVVGLPEGGQLLARSSSTKVQAFRLGSALGMQFHLEVC
HHHHHHHHHHHHHHEEEEEECCCEECCCCCCCEEECCCCCHHHHHHHHHHHCHHHHHHHH
GSLLDEWLDEPSMVKDLKAAGGSKSQLREQFAQYDQLLHPLAEQVFSGFAARCNSYAQTL
HHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NK
CC
>Mature Secondary Structure 
ATPQVLILQHVPWERPGRILSNLEDIGLETVTMNIVDKKKPDLPDFGELAGVVIMGGPM
CCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEHHCCCCCCCCHHHHCCEEEECCCC
GALDYDKYPGLKAEAKLARAAVASGKPILGVCLGHQIIATALGAQLRKGDAPEIGFAPIK
CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
RVDKHDFFSMWDKQLTVLHWHNDVVGLPEGGQLLARSSSTKVQAFRLGSALGMQFHLEVC
HHHHHHHHHHHHHHEEEEEECCCEECCCCCCCEEECCCCCHHHHHHHHHHHCHHHHHHHH
GSLLDEWLDEPSMVKDLKAAGGSKSQLREQFAQYDQLLHPLAEQVFSGFAARCNSYAQTL
HHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7612925; 11677609 [H]