| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691305
Identifier: 213691305
GI number: 213691305
Start: 453298
End: 454206
Strand: Direct
Name: 213691305
Synonym: Blon_0392
Alternate gene names: NA
Gene position: 453298-454206 (Clockwise)
Preceding gene: 213691302
Following gene: 213691307
Centisome position: 16.0
GC content: 57.43
Gene sequence:
>909_bases ATGCCCACCCAAAAACTACTCGAACGCAAAGCCCTGATCGTTGGCATCGTCATCAACGTGCTGCAGGTCTTAGCCGGCAT GGCCGTGTTCTTCATGACCGGCCTCAAGGCCATGTTCCTCGACTTCTCCTTCACCGCGATTTCCGTCCTGTCCGGAATGG TGGCGGTGTATCTCTCGTCGCGCACGGTGCGAACCACCGAGCGCTTCCCCAATGGCATGTTCGCACTGGAACCCATCTAC GCGATCTGCAAGGCCATTTTCACCATGTCGTTGTTGGTGTATTCGCTGATTGACGTGTGCCGAGTAGCGTACGACTACTT CGTGTTCGGGTCCGGCGAACGCATTGAAACCGGCCCGGTGGTCATCTACGAGATCCTGACCGTAATCGTGTGCTTCAGCC TATACACGTATTACCGGCGTTCCAACCGCTCCATCGGCGATTCCAGCACCATGCTCACCGCCGAGTGCAAGAGCACGTTG GTCGACGGATCGATGTCGTTCGGCATCGGCGTGGTTGCCATCTTCCTGATGCTGCTACCGGCCGGCGGTCCGCTTGACTT CCTGCACTACACCGGCGATTTCTTCATCACCGTGGCTTTGGTGGCATTGACCATCAAGGAGCCGTTCAGCGTGCTCAAAG AGGCGTTCGTGGAATTGGTCGGCGGCGTGCATGACGACGATGAAACCAACGCCTACGTGGAGGCCGAGGCACAGCGCCAT CTGCCTGCCAACACCGACTACGAGCAGACGCTGATCTTCAAGACCGGCATGAACTACACCGTTGACGTGTATCTGAGCGG CATCGGCGAAACCATTGATGTAGCCGACCTCATCGAATGCAAGCGCTCGCTGGAGAAGGAGCTCATCAAGCGCCTGCACA TCGTGGACGTGGACTTCGTGTTTGACTGA
Upstream 100 bases:
>100_bases TGAAAATCGCTGGACACCGCTTATACGCAGACTGCCGTGCGCTCCGAACCATGACGTTCGGGCCAACGCAGACATGCCGT GCAATAAGGAAGGCCCACTG
Downstream 100 bases:
>100_bases TTGATGGGTTTGAAGCGGCTACTTCAGGCTCCAAGTGGAACCCTGCGGGCCGTCTTCGATGGCGATGCCGGCCTCGGTCA GGGCGTCGCGAATCTGGTCG
Product: cation efflux protein
Products: NA
Alternate protein names: Cation Efflux Family Protein; Cation Diffusion Facilitator Family Transporter; CDF Family Cation Efflux System Protein; Cation Efflux Protein; Cation Transporter-Like Membrane Protein
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MPTQKLLERKALIVGIVINVLQVLAGMAVFFMTGLKAMFLDFSFTAISVLSGMVAVYLSSRTVRTTERFPNGMFALEPIY AICKAIFTMSLLVYSLIDVCRVAYDYFVFGSGERIETGPVVIYEILTVIVCFSLYTYYRRSNRSIGDSSTMLTAECKSTL VDGSMSFGIGVVAIFLMLLPAGGPLDFLHYTGDFFITVALVALTIKEPFSVLKEAFVELVGGVHDDDETNAYVEAEAQRH LPANTDYEQTLIFKTGMNYTVDVYLSGIGETIDVADLIECKRSLEKELIKRLHIVDVDFVFD
Sequences:
>Translated_302_residues MPTQKLLERKALIVGIVINVLQVLAGMAVFFMTGLKAMFLDFSFTAISVLSGMVAVYLSSRTVRTTERFPNGMFALEPIY AICKAIFTMSLLVYSLIDVCRVAYDYFVFGSGERIETGPVVIYEILTVIVCFSLYTYYRRSNRSIGDSSTMLTAECKSTL VDGSMSFGIGVVAIFLMLLPAGGPLDFLHYTGDFFITVALVALTIKEPFSVLKEAFVELVGGVHDDDETNAYVEAEAQRH LPANTDYEQTLIFKTGMNYTVDVYLSGIGETIDVADLIECKRSLEKELIKRLHIVDVDFVFD >Mature_301_residues PTQKLLERKALIVGIVINVLQVLAGMAVFFMTGLKAMFLDFSFTAISVLSGMVAVYLSSRTVRTTERFPNGMFALEPIYA ICKAIFTMSLLVYSLIDVCRVAYDYFVFGSGERIETGPVVIYEILTVIVCFSLYTYYRRSNRSIGDSSTMLTAECKSTLV DGSMSFGIGVVAIFLMLLPAGGPLDFLHYTGDFFITVALVALTIKEPFSVLKEAFVELVGGVHDDDETNAYVEAEAQRHL PANTDYEQTLIFKTGMNYTVDVYLSGIGETIDVADLIECKRSLEKELIKRLHIVDVDFVFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33561; Mature: 33429
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTQKLLERKALIVGIVINVLQVLAGMAVFFMTGLKAMFLDFSFTAISVLSGMVAVYLSS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RTVRTTERFPNGMFALEPIYAICKAIFTMSLLVYSLIDVCRVAYDYFVFGSGERIETGPV CCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC VIYEILTVIVCFSLYTYYRRSNRSIGDSSTMLTAECKSTLVDGSMSFGIGVVAIFLMLLP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHC AGGPLDFLHYTGDFFITVALVALTIKEPFSVLKEAFVELVGGVHDDDETNAYVEAEAQRH CCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHC LPANTDYEQTLIFKTGMNYTVDVYLSGIGETIDVADLIECKRSLEKELIKRLHIVDVDFV CCCCCCCCCEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEE FD EC >Mature Secondary Structure PTQKLLERKALIVGIVINVLQVLAGMAVFFMTGLKAMFLDFSFTAISVLSGMVAVYLSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RTVRTTERFPNGMFALEPIYAICKAIFTMSLLVYSLIDVCRVAYDYFVFGSGERIETGPV CCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC VIYEILTVIVCFSLYTYYRRSNRSIGDSSTMLTAECKSTLVDGSMSFGIGVVAIFLMLLP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHC AGGPLDFLHYTGDFFITVALVALTIKEPFSVLKEAFVELVGGVHDDDETNAYVEAEAQRH CCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHC LPANTDYEQTLIFKTGMNYTVDVYLSGIGETIDVADLIECKRSLEKELIKRLHIVDVDFV CCCCCCCCCEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEE FD EC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA