Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213691293

Identifier: 213691293

GI number: 213691293

Start: 442114

End: 442407

Strand: Reverse

Name: 213691293

Synonym: Blon_0380

Alternate gene names: NA

Gene position: 442407-442114 (Counterclockwise)

Preceding gene: 213691294

Following gene: 213691292

Centisome position: 15.62

GC content: 57.14

Gene sequence:

>294_bases
ATGAAGTATGTGCCCACCACCACCAAACGCGATTTACGCATCCTAGGCGAACAGTTCTCGCAACAGCGCAAACTACTGAT
GTTGACGGTTGCGGATGTAGCACACCGCTCTGGTGTCAGCCCGACCACAGTGTCAAATCTGGAGCAAGGCAAGGCTGTCC
GGTCAGATTCGCTGTTAACCATCGCGCGCGTGTTGCAACTTGCTGACACACTCGTAGCCGCATGCGACCCCTATTCCACC
GATCTTGGGCGTCTCCGCGCTGGCCAACAACTCCCGAAGCGCGTTCGGAGGTGA

Upstream 100 bases:

>100_bases
TCCTCATTCCGGTATCGCATAGCAGATAATCAATAGTATACTAGTGAATAAATGATTTTATTCATGGAAAACTATATGTT
ATAACACTCGGAGTATCGCA

Downstream 100 bases:

>100_bases
ATCCCTGATGGCAAAAACTATCGAATCAACTGTACTGATTACGCTAGGGCCTGGAATGGAAGCTCCTGCCGGCACATTGT
ATGCGACTGGCGACGACCTA

Product: helix-turn-helix domain protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKYVPTTTKRDLRILGEQFSQQRKLLMLTVADVAHRSGVSPTTVSNLEQGKAVRSDSLLTIARVLQLADTLVAACDPYST
DLGRLRAGQQLPKRVRR

Sequences:

>Translated_97_residues
MKYVPTTTKRDLRILGEQFSQQRKLLMLTVADVAHRSGVSPTTVSNLEQGKAVRSDSLLTIARVLQLADTLVAACDPYST
DLGRLRAGQQLPKRVRR
>Mature_97_residues
MKYVPTTTKRDLRILGEQFSQQRKLLMLTVADVAHRSGVSPTTVSNLEQGKAVRSDSLLTIARVLQLADTLVAACDPYST
DLGRLRAGQQLPKRVRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10778; Mature: 10778

Theoretical pI: Translated: 11.21; Mature: 11.21

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYVPTTTKRDLRILGEQFSQQRKLLMLTVADVAHRSGVSPTTVSNLEQGKAVRSDSLLT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHCCCHHHH
IARVLQLADTLVAACDPYSTDLGRLRAGQQLPKRVRR
HHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHCC
>Mature Secondary Structure
MKYVPTTTKRDLRILGEQFSQQRKLLMLTVADVAHRSGVSPTTVSNLEQGKAVRSDSLLT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHCCCHHHH
IARVLQLADTLVAACDPYSTDLGRLRAGQQLPKRVRR
HHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA