Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213691292

Identifier: 213691292

GI number: 213691292

Start: 440889

End: 442106

Strand: Reverse

Name: 213691292

Synonym: Blon_0379

Alternate gene names: NA

Gene position: 442106-440889 (Counterclockwise)

Preceding gene: 213691293

Following gene: 213691266

Centisome position: 15.61

GC content: 52.13

Gene sequence:

>1218_bases
ATGGCAAAAACTATCGAATCAACTGTACTGATTACGCTAGGGCCTGGAATGGAAGCTCCTGCCGGCACATTGTATGCGAC
TGGCGACGACCTATCGTTCCGCTATGATTCGACGTACACAATCAGCAGCGATTCCTTCGACCTCTTCCCATCTATGCCCC
GCTCGTTGGCCCCATTCTTCTTCTCTGGACTTGGTCCATTTTCGGATTCCGCCCCAGACCGTTGGGGCAGAAAGGTGTTT
TCCCGCAGTCTTAAACGGACGCGTGTCAGCGAGTCGGAATATTTGTTCGGTGTCAACGATCTGACAAGACAGGGTGCCAT
TCGATTCATTGTTGATGGCAAGCCAGCGGCAGGAGATGAAGGAGTACCCGTACTGTCAAAGCTGCCGGAGTTATTGGACA
CTGCGGATGCGGTGGAACAGAACCGCGAGGTAAGTGATGTCTCCTTACGCAGGTTGTATCGGGCAACCGGCTCACTCGGA
GGCGCACGACCTAAAGCTTCGGTGTCGGATCGTAATGCGCTGTGGCTGGCCAAATTTCCGAAACCGAACGGCGATGATTG
GGATGTTATCGGTTGGGAAGCCGTCACCTTGGAAATCGCGAACATGGCCGGCATCAAAGTGCCCGAACATCGCGTCATTG
CAATAAAGGATTCGGAGGAGAGAAGCCGGACCGTGCTATTGACTCACCGTTTTGATCGCGTGTCTGCACCATCAGTTGAG
CGAATGGAGCGATTACCTTATATATCCGCAATGACCGCGCTGGAAGCAAGAGATGGGGACGGCGGAGACTGGTTGGATCT
AGCAGAATTTACGCGTAGGGCAGGAGGAGACACCATAGAGCTGTGGCGGAGAGCAATGTTTGGCGCGGCCATCGGCAACA
CTGATGACCATCTACGAAACCACGGGTATTTGCGTAAGAATAATTCCTGGCAATTGGCACCCGCTTTTGACATGAATCCT
GAACCATTCGATCCGTCGCTACCCGACTCACACCAGATGTCATTATTAGGTGACACCGAAGTCGATATAGATAAATTGAT
GTCCGATGAGAGTCTGTCTTTGTTCGGTGTAAGCCGTAAATATGCGGATCATTGGTTGCCGACATTGCGATCAGCCTTAT
CTCAGGCATTATCTCGAGCCGCGATGCGCCGCATTGACATGCATTCCATCAATCTGATGGCCGAACGTTTTGATAAGGCG
GTTCATGCTCTGCAGTAG

Upstream 100 bases:

>100_bases
GCTGACACACTCGTAGCCGCATGCGACCCCTATTCCACCGATCTTGGGCGTCTCCGCGCTGGCCAACAACTCCCGAAGCG
CGTTCGGAGGTGAATCCCTG

Downstream 100 bases:

>100_bases
AGCGATGGGGATCTACCGCAAACTGTTACTCGTCTCGTGGCTCCGGCCTCGGTATGTCTCTGGTATCGCTTAAAAAGTCA
CGGCGGTCCTCACACCGGAG

Product: HipA domain protein

Products: NA

Alternate protein names: HipA Domain Protein; Xin-Antitoxin System Toxin Component HipA Family; HipA Protein; Amidophosphoribosyl Transferase; HipA-Like C-Terminal Domain-Containing; HipA-Like; HipA-Like Protein; Protein Related Capsule Biosynthesis -Like; Protein Containing HipA-Like C-Terminal Domain; Transcriptional Regulator; Conserved Protein; Orf_Bo

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MAKTIESTVLITLGPGMEAPAGTLYATGDDLSFRYDSTYTISSDSFDLFPSMPRSLAPFFFSGLGPFSDSAPDRWGRKVF
SRSLKRTRVSESEYLFGVNDLTRQGAIRFIVDGKPAAGDEGVPVLSKLPELLDTADAVEQNREVSDVSLRRLYRATGSLG
GARPKASVSDRNALWLAKFPKPNGDDWDVIGWEAVTLEIANMAGIKVPEHRVIAIKDSEERSRTVLLTHRFDRVSAPSVE
RMERLPYISAMTALEARDGDGGDWLDLAEFTRRAGGDTIELWRRAMFGAAIGNTDDHLRNHGYLRKNNSWQLAPAFDMNP
EPFDPSLPDSHQMSLLGDTEVDIDKLMSDESLSLFGVSRKYADHWLPTLRSALSQALSRAAMRRIDMHSINLMAERFDKA
VHALQ

Sequences:

>Translated_405_residues
MAKTIESTVLITLGPGMEAPAGTLYATGDDLSFRYDSTYTISSDSFDLFPSMPRSLAPFFFSGLGPFSDSAPDRWGRKVF
SRSLKRTRVSESEYLFGVNDLTRQGAIRFIVDGKPAAGDEGVPVLSKLPELLDTADAVEQNREVSDVSLRRLYRATGSLG
GARPKASVSDRNALWLAKFPKPNGDDWDVIGWEAVTLEIANMAGIKVPEHRVIAIKDSEERSRTVLLTHRFDRVSAPSVE
RMERLPYISAMTALEARDGDGGDWLDLAEFTRRAGGDTIELWRRAMFGAAIGNTDDHLRNHGYLRKNNSWQLAPAFDMNP
EPFDPSLPDSHQMSLLGDTEVDIDKLMSDESLSLFGVSRKYADHWLPTLRSALSQALSRAAMRRIDMHSINLMAERFDKA
VHALQ
>Mature_404_residues
AKTIESTVLITLGPGMEAPAGTLYATGDDLSFRYDSTYTISSDSFDLFPSMPRSLAPFFFSGLGPFSDSAPDRWGRKVFS
RSLKRTRVSESEYLFGVNDLTRQGAIRFIVDGKPAAGDEGVPVLSKLPELLDTADAVEQNREVSDVSLRRLYRATGSLGG
ARPKASVSDRNALWLAKFPKPNGDDWDVIGWEAVTLEIANMAGIKVPEHRVIAIKDSEERSRTVLLTHRFDRVSAPSVER
MERLPYISAMTALEARDGDGGDWLDLAEFTRRAGGDTIELWRRAMFGAAIGNTDDHLRNHGYLRKNNSWQLAPAFDMNPE
PFDPSLPDSHQMSLLGDTEVDIDKLMSDESLSLFGVSRKYADHWLPTLRSALSQALSRAAMRRIDMHSINLMAERFDKAV
HALQ

Specific function: Unknown

COG id: COG3550

COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45016; Mature: 44885

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS00018 EF_HAND_1 ; PS00334 MYB_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTIESTVLITLGPGMEAPAGTLYATGDDLSFRYDSTYTISSDSFDLFPSMPRSLAPFF
CCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEECCEEEECCCCCCCCCCCCHHHHHHH
FSGLGPFSDSAPDRWGRKVFSRSLKRTRVSESEYLFGVNDLTRQGAIRFIVDGKPAAGDE
HHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHCCCEEEEECCCCCCCCC
GVPVLSKLPELLDTADAVEQNREVSDVSLRRLYRATGSLGGARPKASVSDRNALWLAKFP
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECC
KPNGDDWDVIGWEAVTLEIANMAGIKVPEHRVIAIKDSEERSRTVLLTHRFDRVSAPSVE
CCCCCCCCEECEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCHH
RMERLPYISAMTALEARDGDGGDWLDLAEFTRRAGGDTIELWRRAMFGAAIGNTDDHLRN
HHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHC
HGYLRKNNSWQLAPAFDMNPEPFDPSLPDSHQMSLLGDTEVDIDKLMSDESLSLFGVSRK
CCEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCEEEECHHH
YADHWLPTLRSALSQALSRAAMRRIDMHSINLMAERFDKAVHALQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKTIESTVLITLGPGMEAPAGTLYATGDDLSFRYDSTYTISSDSFDLFPSMPRSLAPFF
CCCCCCEEEEEECCCCCCCCCEEEECCCCCEEEECCEEEECCCCCCCCCCCCHHHHHHH
FSGLGPFSDSAPDRWGRKVFSRSLKRTRVSESEYLFGVNDLTRQGAIRFIVDGKPAAGDE
HHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHCCCEEEEECCCCCCCCC
GVPVLSKLPELLDTADAVEQNREVSDVSLRRLYRATGSLGGARPKASVSDRNALWLAKFP
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECC
KPNGDDWDVIGWEAVTLEIANMAGIKVPEHRVIAIKDSEERSRTVLLTHRFDRVSAPSVE
CCCCCCCCEECEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCHH
RMERLPYISAMTALEARDGDGGDWLDLAEFTRRAGGDTIELWRRAMFGAAIGNTDDHLRN
HHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHC
HGYLRKNNSWQLAPAFDMNPEPFDPSLPDSHQMSLLGDTEVDIDKLMSDESLSLFGVSRK
CCEEEECCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCEEEECHHH
YADHWLPTLRSALSQALSRAAMRRIDMHSINLMAERFDKAVHALQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA