| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691293
Identifier: 213691293
GI number: 213691293
Start: 442114
End: 442407
Strand: Reverse
Name: 213691293
Synonym: Blon_0380
Alternate gene names: NA
Gene position: 442407-442114 (Counterclockwise)
Preceding gene: 213691294
Following gene: 213691292
Centisome position: 15.62
GC content: 57.14
Gene sequence:
>294_bases ATGAAGTATGTGCCCACCACCACCAAACGCGATTTACGCATCCTAGGCGAACAGTTCTCGCAACAGCGCAAACTACTGAT GTTGACGGTTGCGGATGTAGCACACCGCTCTGGTGTCAGCCCGACCACAGTGTCAAATCTGGAGCAAGGCAAGGCTGTCC GGTCAGATTCGCTGTTAACCATCGCGCGCGTGTTGCAACTTGCTGACACACTCGTAGCCGCATGCGACCCCTATTCCACC GATCTTGGGCGTCTCCGCGCTGGCCAACAACTCCCGAAGCGCGTTCGGAGGTGA
Upstream 100 bases:
>100_bases TCCTCATTCCGGTATCGCATAGCAGATAATCAATAGTATACTAGTGAATAAATGATTTTATTCATGGAAAACTATATGTT ATAACACTCGGAGTATCGCA
Downstream 100 bases:
>100_bases ATCCCTGATGGCAAAAACTATCGAATCAACTGTACTGATTACGCTAGGGCCTGGAATGGAAGCTCCTGCCGGCACATTGT ATGCGACTGGCGACGACCTA
Product: helix-turn-helix domain protein
Products: NA
Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain Protein
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MKYVPTTTKRDLRILGEQFSQQRKLLMLTVADVAHRSGVSPTTVSNLEQGKAVRSDSLLTIARVLQLADTLVAACDPYST DLGRLRAGQQLPKRVRR
Sequences:
>Translated_97_residues MKYVPTTTKRDLRILGEQFSQQRKLLMLTVADVAHRSGVSPTTVSNLEQGKAVRSDSLLTIARVLQLADTLVAACDPYST DLGRLRAGQQLPKRVRR >Mature_97_residues MKYVPTTTKRDLRILGEQFSQQRKLLMLTVADVAHRSGVSPTTVSNLEQGKAVRSDSLLTIARVLQLADTLVAACDPYST DLGRLRAGQQLPKRVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10778; Mature: 10778
Theoretical pI: Translated: 11.21; Mature: 11.21
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYVPTTTKRDLRILGEQFSQQRKLLMLTVADVAHRSGVSPTTVSNLEQGKAVRSDSLLT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHCCCHHHH IARVLQLADTLVAACDPYSTDLGRLRAGQQLPKRVRR HHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHCC >Mature Secondary Structure MKYVPTTTKRDLRILGEQFSQQRKLLMLTVADVAHRSGVSPTTVSNLEQGKAVRSDSLLT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHCCCHHHH IARVLQLADTLVAACDPYSTDLGRLRAGQQLPKRVRR HHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA