| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yccK [H]
Identifier: 213691285
GI number: 213691285
Start: 431779
End: 432699
Strand: Direct
Name: yccK [H]
Synonym: Blon_0372
Alternate gene names: 213691285
Gene position: 431779-432699 (Clockwise)
Preceding gene: 213691284
Following gene: 213691286
Centisome position: 15.24
GC content: 63.63
Gene sequence:
>921_bases ATGCTTAGGCTTGATCGTGGATATCGAGTTTCCATAAGTTTCACGAAGGGAATCACCATGGCATTGTTCCGTAACCTCGG ACCGTTCTCCACCACCGCCATCGGCCACGGCGAAATGCCGCTGACCATCGAAAACAACCGCGGCCACGAGGTCGGCATCG AAACCCTGCATGCCTCGCTGGACGCCGGTTGCCGCCACATCGACACCGCTTGGGCCTACTACTGCTCCGGCGGCGAGGAG CAGACCGGTGAAAAGCTGGTGCGCGAGGCCCTTGAGACCTGGAAGGGGCCGAAGGACGAGGTGCTGGTGGCCACCAAGGT GGGCCACTTCCGCAACTTCACCGACGGCCGCCCCACGTGGGATGTGGACGGTCGCCCGGAGAACCTGATTCGGCGCGGCA AGGAGAGCGCACTGGCGCTCGGCGTGGACACCATCGACCTGCTGTACTTCCACCGCCCGGACCCGAAGGTGCCGTACAAC GAGTCCATCGAAGCCATCAAGCAGCTGGTGGACGAGGGCGTGGCGCAGGAGGCCGGTATCTCCAACGCCTCCATCGAGCA AATCGACATTGCGCGCGGCATTCTGGGCGACAAGCTCGTGGCCGTGCAGAACCAGTACTCGCCGATTCACCTGGAGACCC AGGACACGCTCGACTACTGCGCCAAGGTCGGTCTGGCCTTCGTGTGCTGGAGCCCGCTCGGCGGCTACCGTCACCCCTAT GATGAGACCAAGTTCGACCCGTTCCGCGAGGTCGCGGCGGCCCATGGCGTGAGCTACCAGCAGGTCGTGCTGGCATGGGA GCTCGCCAAGGGAGATCACGTGTTCGTGATTCCCGGTGCGCACCGTCCCGAAACCATCCTCGACTCCCTGAAGGCCGACC AGCTCGAACTCACCCCCGAAGAACTCGCCAAGCTCGGCTGA
Upstream 100 bases:
>100_bases CTGAACTGGATATGAGTAAGTTGCGTTTTCTATTCCGTGAAGTTGCGGAAATTTCATAGATTGATTGTGCGGGCAGGCCG AGAGTGTGAAATCCAACGGG
Downstream 100 bases:
>100_bases ACTTTCTCAGCTCCCCCTTGTCAGGGGAGCTGTCTCGCGTAGCGAGACTGAGGGGTAGTCGCTGGAGTAGTCCCGCAAGG AGATAATTATGCGTAAAAAA
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MLRLDRGYRVSISFTKGITMALFRNLGPFSTTAIGHGEMPLTIENNRGHEVGIETLHASLDAGCRHIDTAWAYYCSGGEE QTGEKLVREALETWKGPKDEVLVATKVGHFRNFTDGRPTWDVDGRPENLIRRGKESALALGVDTIDLLYFHRPDPKVPYN ESIEAIKQLVDEGVAQEAGISNASIEQIDIARGILGDKLVAVQNQYSPIHLETQDTLDYCAKVGLAFVCWSPLGGYRHPY DETKFDPFREVAAAHGVSYQQVVLAWELAKGDHVFVIPGAHRPETILDSLKADQLELTPEELAKLG
Sequences:
>Translated_306_residues MLRLDRGYRVSISFTKGITMALFRNLGPFSTTAIGHGEMPLTIENNRGHEVGIETLHASLDAGCRHIDTAWAYYCSGGEE QTGEKLVREALETWKGPKDEVLVATKVGHFRNFTDGRPTWDVDGRPENLIRRGKESALALGVDTIDLLYFHRPDPKVPYN ESIEAIKQLVDEGVAQEAGISNASIEQIDIARGILGDKLVAVQNQYSPIHLETQDTLDYCAKVGLAFVCWSPLGGYRHPY DETKFDPFREVAAAHGVSYQQVVLAWELAKGDHVFVIPGAHRPETILDSLKADQLELTPEELAKLG >Mature_306_residues MLRLDRGYRVSISFTKGITMALFRNLGPFSTTAIGHGEMPLTIENNRGHEVGIETLHASLDAGCRHIDTAWAYYCSGGEE QTGEKLVREALETWKGPKDEVLVATKVGHFRNFTDGRPTWDVDGRPENLIRRGKESALALGVDTIDLLYFHRPDPKVPYN ESIEAIKQLVDEGVAQEAGISNASIEQIDIARGILGDKLVAVQNQYSPIHLETQDTLDYCAKVGLAFVCWSPLGGYRHPY DETKFDPFREVAAAHGVSYQQVVLAWELAKGDHVFVIPGAHRPETILDSLKADQLELTPEELAKLG
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI223468663, Length=280, Percent_Identity=26.7857142857143, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI24497577, Length=273, Percent_Identity=25.2747252747253, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI5174391, Length=273, Percent_Identity=25.2747252747253, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI291291012, Length=280, Percent_Identity=26.4285714285714, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI310109922, Length=263, Percent_Identity=25.0950570342205, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI5453543, Length=282, Percent_Identity=24.822695035461, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1787674, Length=290, Percent_Identity=29.6551724137931, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI87081735, Length=285, Percent_Identity=28.4210526315789, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI48994888, Length=294, Percent_Identity=26.530612244898, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1786400, Length=255, Percent_Identity=27.4509803921569, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788081, Length=287, Percent_Identity=25.7839721254355, Blast_Score=63, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324694, Length=257, Percent_Identity=26.4591439688716, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24644950, Length=289, Percent_Identity=28.0276816608997, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI221378297, Length=309, Percent_Identity=26.8608414239482, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24663317, Length=305, Percent_Identity=26.5573770491803, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 33909; Mature: 33909
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLDRGYRVSISFTKGITMALFRNLGPFSTTAIGHGEMPLTIENNRGHEVGIETLHASL CCCCCCCCEEEEEECCCHHHHHHHCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHH DAGCRHIDTAWAYYCSGGEEQTGEKLVREALETWKGPKDEVLVATKVGHFRNFTDGRPTW HHCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCC DVDGRPENLIRRGKESALALGVDTIDLLYFHRPDPKVPYNESIEAIKQLVDEGVAQEAGI CCCCCHHHHHHCCCCCEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCC SNASIEQIDIARGILGDKLVAVQNQYSPIHLETQDTLDYCAKVGLAFVCWSPLGGYRHPY CCCCHHHHHHHHHHHCCEEEEEECCCCCEEECCHHHHHHHHHHHHHEEEECCCCCCCCCC DETKFDPFREVAAAHGVSYQQVVLAWELAKGDHVFVIPGAHRPETILDSLKADQLELTPE CCCCCCHHHHHHHHHCCCHHHEEEEEEECCCCEEEEECCCCCCHHHHHHHCCCCEECCHH ELAKLG HHHHCC >Mature Secondary Structure MLRLDRGYRVSISFTKGITMALFRNLGPFSTTAIGHGEMPLTIENNRGHEVGIETLHASL CCCCCCCCEEEEEECCCHHHHHHHCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHH DAGCRHIDTAWAYYCSGGEEQTGEKLVREALETWKGPKDEVLVATKVGHFRNFTDGRPTW HHCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCC DVDGRPENLIRRGKESALALGVDTIDLLYFHRPDPKVPYNESIEAIKQLVDEGVAQEAGI CCCCCHHHHHHCCCCCEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCC SNASIEQIDIARGILGDKLVAVQNQYSPIHLETQDTLDYCAKVGLAFVCWSPLGGYRHPY CCCCHHHHHHHHHHHCCEEEEEECCCCCEEECCHHHHHHHHHHHHHEEEECCCCCCCCCC DETKFDPFREVAAAHGVSYQQVVLAWELAKGDHVFVIPGAHRPETILDSLKADQLELTPE CCCCCCHHHHHHHHHCCCHHHEEEEEEECCCCEEEEECCCCCCHHHHHHHCCCCEECCHH ELAKLG HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]