| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691264
Identifier: 213691264
GI number: 213691264
Start: 404303
End: 404902
Strand: Direct
Name: 213691264
Synonym: Blon_0348
Alternate gene names: NA
Gene position: 404303-404902 (Clockwise)
Preceding gene: 213691263
Following gene: 213691265
Centisome position: 14.27
GC content: 66.17
Gene sequence:
>600_bases ATGTGTACGCCGGGGTATGGCATCACGCTTGACCGGTTCATGAGGGTCGCGCACCTGTTGCCGCGCCAGAGGGGCAACGT GGCGGTCGACAACTACAGGTTCGTCAACGCCCTGCTGTGGATGTGCAGGACGGGAGCCCCGTGGAGGGACCTGCCGGAGT GCTACGGCAAGTGGATCACCGTCTGCCGGCGGTTCGACCGCTGGTACGGGAACGGCGCGATGGAACGCCTGTTCACGGCA TTGCAGGAGGAGCGGATCATCGGGGTGGAGATCCGGGTGCTCGCCATGGACTCCACGAGCGTGAAGGTCCACCAGCACGC GCCCGGCGCGTTCATGGGAGCCAGCCTGCTCATGGACCGCGCCTACGAGGGGGATTCCACCCGCCTGCTGGCGGAGTCGT TCGGCCTGACGCCGGTCGTGCCGCCCAAGAAGAACCGCACGGACCCATGGGACTACGACAGGGAGGCATACAAGGGGCGG AGCATGGTCGAACGCGTCTTCAACCGCATGAAGCACCACCGCAAGGCCGCCACCCGCTACGACAGGCTCGACGAGACCTT CCTCGCCGCGCCCGGCTCATCCTCATCGCCATCTACCTGA
Upstream 100 bases:
>100_bases AGATTGGGCGGACTCCGTTGGGAATCGCGGATAGGAGCGGGGTGTCAACTGGTAACTAGGGTGTGTTTACACTATCTAGG TTTTGTGTGATGATTGGCGT
Downstream 100 bases:
>100_bases AAACACAGCCAAAAACTCAAAGTGTAAATACACCCTAATTCATGATTGGTATGCGTAGATGAGCCTGTACAGTGAAAGCT ATGCGTGTAATTTCTGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MCTPGYGITLDRFMRVAHLLPRQRGNVAVDNYRFVNALLWMCRTGAPWRDLPECYGKWITVCRRFDRWYGNGAMERLFTA LQEERIIGVEIRVLAMDSTSVKVHQHAPGAFMGASLLMDRAYEGDSTRLLAESFGLTPVVPPKKNRTDPWDYDREAYKGR SMVERVFNRMKHHRKAATRYDRLDETFLAAPGSSSSPST
Sequences:
>Translated_199_residues MCTPGYGITLDRFMRVAHLLPRQRGNVAVDNYRFVNALLWMCRTGAPWRDLPECYGKWITVCRRFDRWYGNGAMERLFTA LQEERIIGVEIRVLAMDSTSVKVHQHAPGAFMGASLLMDRAYEGDSTRLLAESFGLTPVVPPKKNRTDPWDYDREAYKGR SMVERVFNRMKHHRKAATRYDRLDETFLAAPGSSSSPST >Mature_199_residues MCTPGYGITLDRFMRVAHLLPRQRGNVAVDNYRFVNALLWMCRTGAPWRDLPECYGKWITVCRRFDRWYGNGAMERLFTA LQEERIIGVEIRVLAMDSTSVKVHQHAPGAFMGASLLMDRAYEGDSTRLLAESFGLTPVVPPKKNRTDPWDYDREAYKGR SMVERVFNRMKHHRKAATRYDRLDETFLAAPGSSSSPST
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To transposase of insertion sequence IS6501 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22853; Mature: 22853
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTPGYGITLDRFMRVAHLLPRQRGNVAVDNYRFVNALLWMCRTGAPWRDLPECYGKWIT CCCCCCCCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VCRRFDRWYGNGAMERLFTALQEERIIGVEIRVLAMDSTSVKVHQHAPGAFMGASLLMDR HHHHHHHHHCCHHHHHHHHHHHHCCEEEEEEEEEEECCCCEEEECCCCCHHHHHHHHHHH AYEGDSTRLLAESFGLTPVVPPKKNRTDPWDYDREAYKGRSMVERVFNRMKHHRKAATRY HCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHH DRLDETFLAAPGSSSSPST HHHHHHHEECCCCCCCCCC >Mature Secondary Structure MCTPGYGITLDRFMRVAHLLPRQRGNVAVDNYRFVNALLWMCRTGAPWRDLPECYGKWIT CCCCCCCCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VCRRFDRWYGNGAMERLFTALQEERIIGVEIRVLAMDSTSVKVHQHAPGAFMGASLLMDR HHHHHHHHHCCHHHHHHHHHHHHCCEEEEEEEEEEECCCCEEEECCCCCHHHHHHHHHHH AYEGDSTRLLAESFGLTPVVPPKKNRTDPWDYDREAYKGRSMVERVFNRMKHHRKAATRY HCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHH DRLDETFLAAPGSSSSPST HHHHHHHEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424; 8190622 [H]