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The map label for this gene is pep1A [H]

Identifier: 213691200

GI number: 213691200

Start: 334962

End: 337055

Strand: Reverse

Name: pep1A [H]

Synonym: Blon_0282

Alternate gene names: 213691200

Gene position: 337055-334962 (Counterclockwise)

Preceding gene: 213691204

Following gene: 213691199

Centisome position: 11.9

GC content: 63.23

Gene sequence:

>2094_bases
GTGCTGAAAGGCCTGGCTGTCGAAGCCCCCGCACCGTCCATCGAAGCAAACGAGCCCGGCCAGTTCGGCCGCATCAATGT
CATGGACATCACTCCCGCCGAGGAGCGTGGCATCTTCCCCGCCCGCGTGGAACTCGGCGAACCGTTTGAGATGACCGCCC
AAGTGTTCATCGAAGGCCGCACCAAGGTGGGTGCCACCGCCATCGTGCGCAACCCGCGCGGCAAGGAAACCATGCGCCAG
GCCATGACCTGTATAAATCCCGGCCTCGATCGTTGGACCGTGATGGTCAAGTGCGGCGAGCACAGCGATCTGAAGCCTTG
GGAGGATGGCTACGCGGCCGTCAAGCGTCAGCTCGGCGAATGGACCGTGACCATCGAAGGTTGGGAAGACACGTACGTTT
CTTGGCTGCATGACGCCCGTATCAAGGTGCGTGTGATGGACGACGTGGACAACGCACTCAATTCCGGTGCCGAGCTGCTG
GCCCGTTGGTCCGCAACCCCGGACGCCGGCCTGACCGCACGCGATCGCAAGACCTTGGAGAAGGCCGCTGAGACCATGGC
CGATCAGACGCTGAGCGCCGAGGATCGTCTCGCCGCCGGCGACAACCCGACCATCGCCGCCCTGCACGAGACTCACCCGC
TGCGCGACGGTATCTCCCCCAGTCAGCCCCAGCGTTTCAAGGTGGAACGCCCGAAGTCCAGCTTCGCGGCTTGGTACCAG
TTCTTCCCGCGTTCCGAAGGCGCCACCATCGATCCGAACACCGGCAAGATCATTCAGGGTACGCTGAAGACCTCGATGGC
TGGTCTCGAACGCGCCGCTGCCGAGGGCTTCGACATCGTCTACCTGCCGCCGGTCTTCCCGATTGGCGTGACCAACCGCA
AGGGCCGCAACAACACGCTGGTCGCCGGCCCCGATGACCCGGGCTCACCGTTCGGCATCGGCTCCGAGCTGGGCGGCCAC
GACACCGTGGACCCGCTGCTCGGCACCATGGACGATTTCAAGGCCCTATGCCGGCGTGCGCACGAACTCGGACTGGAGGT
AGCGCTCGATTTCGCCCTGCAGTGCTCGCCCGATCACCCGTGGGTCAAGGCTCATCCGAACTGGTTCCGGCACAAGCCGG
ACGGCTCCATCGCGTTCGCCGAAAACCCGCCGAAGAAGTATCAGGATATATATCCGATCGACTTCAACGCCGACATGGCG
GGCATCGAAAAGGAAGTCGAGCGCGTCATGGACCTGTGGATCAAGGCGGGCGTGACGATCTTCCGGGTCGATAATCCGCA
CACCAAGCCGGTGCGTTTCTGGCAGGATGTGATCGCCGCGGTCACGAAGAAGCACCCCGAGGTGTTGTTCCTGGCCGAGG
CATTCACCCGCCCAGGCATGATGCGCGCCCTGAGCTACGTGGGCTTCACCCAGTCCCACTGCTACTTCCCGTGGCGCAAC
ACCAAGGACGAACTGGAAGAGTATCTGCCGGTCACCAATGGCGACGACGGCTACTACCAGCACAACACCTTCTGGCCCAC
CACGCCGGATATTCTCACCGCTTACATGCGAGACAACGGCGTAGCCGGCCACTGCGTGCGTGCGGTGCTGGCAGCCATGG
GCTCGCCGTCCTGGGGTATCTACAACGGTTACGAACTCATCGAGAACAAGCAGCGCCCCGGCTTCGAAGAGCAGATCGAC
AACGAGAAGTACGAGGTCAAGGTTCGCGATTGGAGCAAGGCCAAGCAGTACGGCGTGGCCGAGATGCTCACCGCGCTCAA
CAAGATTCGTCGCGCCCACCCGGCCGCGTTGAGCTACCACAACCTCACCGTGCTGCCTACGTCCGACCCGAATATTCTGG
CTTTCGCACGCCACACGCCGGCCGAACTGACCGGCACCGGCCAAGCGGACACGCTGATTGTGGTCGTGAACCTCGATGGA
CACAACGCACACCAGTCGATGATTCACCTGGAACTCGGCGAGCTGGGTCTGCCCACCGACCGCCCGCTCAACGTGCGCGA
CGAGCTGACCGGCCGCGAATTCCAGTGGGGTTGGGACAACTACGTGTCTCTGGCGCCTTGGGCGGATGTGGCTCACATCC
TGTCCGTGCAGTGA

Upstream 100 bases:

>100_bases
TAACAACACCACGAAGACGAAGTCAAAGGCGACTTCTGCCCGAAAGAGCCCCGCAACCAAGCGCAAGAGAGTCAGCGCCG
AAACGGCACGCGCCGCAGCA

Downstream 100 bases:

>100_bases
TGCGGTAGTGCAACGGTAATGCAACAGTGATGCGGTTTACGCGCACGGGTATATCGTGCGTGTAAACCGCTAGAAATCCT
CCCCTCAACGGGAGGATTTC

Product: alpha amylase, catalytic region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 697; Mature: 697

Protein sequence:

>697_residues
MLKGLAVEAPAPSIEANEPGQFGRINVMDITPAEERGIFPARVELGEPFEMTAQVFIEGRTKVGATAIVRNPRGKETMRQ
AMTCINPGLDRWTVMVKCGEHSDLKPWEDGYAAVKRQLGEWTVTIEGWEDTYVSWLHDARIKVRVMDDVDNALNSGAELL
ARWSATPDAGLTARDRKTLEKAAETMADQTLSAEDRLAAGDNPTIAALHETHPLRDGISPSQPQRFKVERPKSSFAAWYQ
FFPRSEGATIDPNTGKIIQGTLKTSMAGLERAAAEGFDIVYLPPVFPIGVTNRKGRNNTLVAGPDDPGSPFGIGSELGGH
DTVDPLLGTMDDFKALCRRAHELGLEVALDFALQCSPDHPWVKAHPNWFRHKPDGSIAFAENPPKKYQDIYPIDFNADMA
GIEKEVERVMDLWIKAGVTIFRVDNPHTKPVRFWQDVIAAVTKKHPEVLFLAEAFTRPGMMRALSYVGFTQSHCYFPWRN
TKDELEEYLPVTNGDDGYYQHNTFWPTTPDILTAYMRDNGVAGHCVRAVLAAMGSPSWGIYNGYELIENKQRPGFEEQID
NEKYEVKVRDWSKAKQYGVAEMLTALNKIRRAHPAALSYHNLTVLPTSDPNILAFARHTPAELTGTGQADTLIVVVNLDG
HNAHQSMIHLELGELGLPTDRPLNVRDELTGREFQWGWDNYVSLAPWADVAHILSVQ

Sequences:

>Translated_697_residues
MLKGLAVEAPAPSIEANEPGQFGRINVMDITPAEERGIFPARVELGEPFEMTAQVFIEGRTKVGATAIVRNPRGKETMRQ
AMTCINPGLDRWTVMVKCGEHSDLKPWEDGYAAVKRQLGEWTVTIEGWEDTYVSWLHDARIKVRVMDDVDNALNSGAELL
ARWSATPDAGLTARDRKTLEKAAETMADQTLSAEDRLAAGDNPTIAALHETHPLRDGISPSQPQRFKVERPKSSFAAWYQ
FFPRSEGATIDPNTGKIIQGTLKTSMAGLERAAAEGFDIVYLPPVFPIGVTNRKGRNNTLVAGPDDPGSPFGIGSELGGH
DTVDPLLGTMDDFKALCRRAHELGLEVALDFALQCSPDHPWVKAHPNWFRHKPDGSIAFAENPPKKYQDIYPIDFNADMA
GIEKEVERVMDLWIKAGVTIFRVDNPHTKPVRFWQDVIAAVTKKHPEVLFLAEAFTRPGMMRALSYVGFTQSHCYFPWRN
TKDELEEYLPVTNGDDGYYQHNTFWPTTPDILTAYMRDNGVAGHCVRAVLAAMGSPSWGIYNGYELIENKQRPGFEEQID
NEKYEVKVRDWSKAKQYGVAEMLTALNKIRRAHPAALSYHNLTVLPTSDPNILAFARHTPAELTGTGQADTLIVVVNLDG
HNAHQSMIHLELGELGLPTDRPLNVRDELTGREFQWGWDNYVSLAPWADVAHILSVQ
>Mature_697_residues
MLKGLAVEAPAPSIEANEPGQFGRINVMDITPAEERGIFPARVELGEPFEMTAQVFIEGRTKVGATAIVRNPRGKETMRQ
AMTCINPGLDRWTVMVKCGEHSDLKPWEDGYAAVKRQLGEWTVTIEGWEDTYVSWLHDARIKVRVMDDVDNALNSGAELL
ARWSATPDAGLTARDRKTLEKAAETMADQTLSAEDRLAAGDNPTIAALHETHPLRDGISPSQPQRFKVERPKSSFAAWYQ
FFPRSEGATIDPNTGKIIQGTLKTSMAGLERAAAEGFDIVYLPPVFPIGVTNRKGRNNTLVAGPDDPGSPFGIGSELGGH
DTVDPLLGTMDDFKALCRRAHELGLEVALDFALQCSPDHPWVKAHPNWFRHKPDGSIAFAENPPKKYQDIYPIDFNADMA
GIEKEVERVMDLWIKAGVTIFRVDNPHTKPVRFWQDVIAAVTKKHPEVLFLAEAFTRPGMMRALSYVGFTQSHCYFPWRN
TKDELEEYLPVTNGDDGYYQHNTFWPTTPDILTAYMRDNGVAGHCVRAVLAAMGSPSWGIYNGYELIENKQRPGFEEQID
NEKYEVKVRDWSKAKQYGVAEMLTALNKIRRAHPAALSYHNLTVLPTSDPNILAFARHTPAELTGTGQADTLIVVVNLDG
HNAHQSMIHLELGELGLPTDRPLNVRDELTGREFQWGWDNYVSLAPWADVAHILSVQ

Specific function: Could convert glycogen into units that may be subsequently converted into trehalose [H]

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family. GlgE subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021828
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF11896 DUF3416 [H]

EC number: NA

Molecular weight: Translated: 77672; Mature: 77672

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGLAVEAPAPSIEANEPGQFGRINVMDITPAEERGIFPARVELGEPFEMTAQVFIEGR
CCCCEEECCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCEEECCCCCHHEEEEEEEECC
TKVGATAIVRNPRGKETMRQAMTCINPGLDRWTVMVKCGEHSDLKPWEDGYAAVKRQLGE
CCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCC
WTVTIEGWEDTYVSWLHDARIKVRVMDDVDNALNSGAELLARWSATPDAGLTARDRKTLE
EEEEEECCCHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
KAAETMADQTLSAEDRLAAGDNPTIAALHETHPLRDGISPSQPQRFKVERPKSSFAAWYQ
HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHH
FFPRSEGATIDPNTGKIIQGTLKTSMAGLERAAAEGFDIVYLPPVFPIGVTNRKGRNNTL
HCCCCCCCEECCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCCCCCCE
VAGPDDPGSPFGIGSELGGHDTVDPLLGTMDDFKALCRRAHELGLEVALDFALQCSPDHP
EECCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCHHEEEEEEEEECCCCC
WVKAHPNWFRHKPDGSIAFAENPPKKYQDIYPIDFNADMAGIEKEVERVMDLWIKAGVTI
EEECCCCHHCCCCCCCEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEE
FRVDNPHTKPVRFWQDVIAAVTKKHPEVLFLAEAFTRPGMMRALSYVGFTQSHCYFPWRN
EEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHCCCHHHHHHHHHCCCCCCEECCCCC
TKDELEEYLPVTNGDDGYYQHNTFWPTTPDILTAYMRDNGVAGHCVRAVLAAMGSPSWGI
CHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
YNGYELIENKQRPGFEEQIDNEKYEVKVRDWSKAKQYGVAEMLTALNKIRRAHPAALSYH
CCCHHHHCCCCCCCHHHHHCCCEEEEEECCHHHHHHCCHHHHHHHHHHHHHHCCCEEEEC
NLTVLPTSDPNILAFARHTPAELTGTGQADTLIVVVNLDGHNAHQSMIHLELGELGLPTD
CEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCC
RPLNVRDELTGREFQWGWDNYVSLAPWADVAHILSVQ
CCCCCHHHCCCCEEECCCCCCEEECCHHHHHHHHCCC
>Mature Secondary Structure
MLKGLAVEAPAPSIEANEPGQFGRINVMDITPAEERGIFPARVELGEPFEMTAQVFIEGR
CCCCEEECCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCEEECCCCCHHEEEEEEEECC
TKVGATAIVRNPRGKETMRQAMTCINPGLDRWTVMVKCGEHSDLKPWEDGYAAVKRQLGE
CCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCC
WTVTIEGWEDTYVSWLHDARIKVRVMDDVDNALNSGAELLARWSATPDAGLTARDRKTLE
EEEEEECCCHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
KAAETMADQTLSAEDRLAAGDNPTIAALHETHPLRDGISPSQPQRFKVERPKSSFAAWYQ
HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHH
FFPRSEGATIDPNTGKIIQGTLKTSMAGLERAAAEGFDIVYLPPVFPIGVTNRKGRNNTL
HCCCCCCCEECCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCCCCCCE
VAGPDDPGSPFGIGSELGGHDTVDPLLGTMDDFKALCRRAHELGLEVALDFALQCSPDHP
EECCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCHHEEEEEEEEECCCCC
WVKAHPNWFRHKPDGSIAFAENPPKKYQDIYPIDFNADMAGIEKEVERVMDLWIKAGVTI
EEECCCCHHCCCCCCCEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEE
FRVDNPHTKPVRFWQDVIAAVTKKHPEVLFLAEAFTRPGMMRALSYVGFTQSHCYFPWRN
EEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHCCCHHHHHHHHHCCCCCCEECCCCC
TKDELEEYLPVTNGDDGYYQHNTFWPTTPDILTAYMRDNGVAGHCVRAVLAAMGSPSWGI
CHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
YNGYELIENKQRPGFEEQIDNEKYEVKVRDWSKAKQYGVAEMLTALNKIRRAHPAALSYH
CCCHHHHCCCCCCCHHHHHCCCEEEEEECCHHHHHHCCHHHHHHHHHHHHHHCCCEEEEC
NLTVLPTSDPNILAFARHTPAELTGTGQADTLIVVVNLDGHNAHQSMIHLELGELGLPTD
CEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCC
RPLNVRDELTGREFQWGWDNYVSLAPWADVAHILSVQ
CCCCCHHHCCCCEEECCCCCCEEECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10821190; 12000953 [H]