| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is ppa [H]
Identifier: 213691199
GI number: 213691199
Start: 334240
End: 334734
Strand: Reverse
Name: ppa [H]
Synonym: Blon_0281
Alternate gene names: 213691199
Gene position: 334734-334240 (Counterclockwise)
Preceding gene: 213691200
Following gene: 213691198
Centisome position: 11.82
GC content: 61.01
Gene sequence:
>495_bases ATGGCAGAAACCTTCAACGTCGTTGTGGAAATTCCGCGCGGCTCCAAGAACAAGTACGAAGTCGATCACGAGACCGGTCG CGTCTTCCTGGACCGTACCCTGTTCACCGCAATGGGTTACCCGGATGACTACGGCTACATCGACGGCACCCTGGGCGAGG ACGGCGATCCGCTGGACGCTCTCGTGATGATTCCGAACTCCGTGTTCCCGGGCTGCGTGGTCGAGTGCCGCGCCGTGGGC CTGTACCACATGGTCGACGAGGCCGGCGGCGACGACAAGGTGCTGTGCGTGCCCGCCGACGTTCGTTTCGATGACATCAA GGACATCGACGACGTCAACGAGTACCACAAGGCCGAAATCAAGCACTTCTTCGAGCAGTACAAGGCTCTGGAGCCGGGCA AGGAAGTCCTGCCGGGCGACTACTGGACCGGTGCTGACGCCGCCGAAAAGGAAATCATTGCCGCGCGTGAGCGTCTCGCG AACGAAGGCAAGTGA
Upstream 100 bases:
>100_bases TCTCAGCACGGTTTCTTGAGTTCCGCACCTGTTTTGCAGGCGCAAACAGGGTATTGTGGTGAGACGATAACGTAACTGTC GATTTTCAAGGAGAAATGAC
Downstream 100 bases:
>100_bases TTCGATTCCGAATCGTCGGCGGGAGACCTCTCCGGAGGTCTCCCGCCTTTTTGGTTCGACGTGCATCGCGTGATATAGTG CTGGTGTATTTTTCAGCTAG
Product: Inorganic diphosphatase
Products: NA
Alternate protein names: Pyrophosphate phospho-hydrolase; PPase [H]
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MAETFNVVVEIPRGSKNKYEVDHETGRVFLDRTLFTAMGYPDDYGYIDGTLGEDGDPLDALVMIPNSVFPGCVVECRAVG LYHMVDEAGGDDKVLCVPADVRFDDIKDIDDVNEYHKAEIKHFFEQYKALEPGKEVLPGDYWTGADAAEKEIIAARERLA NEGK
Sequences:
>Translated_164_residues MAETFNVVVEIPRGSKNKYEVDHETGRVFLDRTLFTAMGYPDDYGYIDGTLGEDGDPLDALVMIPNSVFPGCVVECRAVG LYHMVDEAGGDDKVLCVPADVRFDDIKDIDDVNEYHKAEIKHFFEQYKALEPGKEVLPGDYWTGADAAEKEIIAARERLA NEGK >Mature_163_residues AETFNVVVEIPRGSKNKYEVDHETGRVFLDRTLFTAMGYPDDYGYIDGTLGEDGDPLDALVMIPNSVFPGCVVECRAVGL YHMVDEAGGDDKVLCVPADVRFDDIKDIDDVNEYHKAEIKHFFEQYKALEPGKEVLPGDYWTGADAAEKEIIAARERLAN EGK
Specific function: Unknown
COG id: COG0221
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790673, Length=166, Percent_Identity=48.1927710843374, Blast_Score=145, Evalue=2e-36,
Paralogues:
None
Copy number: 5480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008162 [H]
Pfam domain/function: PF00719 Pyrophosphatase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 18281; Mature: 18149
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: PS00387 PPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETFNVVVEIPRGSKNKYEVDHETGRVFLDRTLFTAMGYPDDYGYIDGTLGEDGDPLDA CCCCEEEEEECCCCCCCCEEECCCCCEEEEHHHHHHHCCCCCCCCEECCCCCCCCCCCEE LVMIPNSVFPGCVVECRAVGLYHMVDEAGGDDKVLCVPADVRFDDIKDIDDVNEYHKAEI EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH KHFFEQYKALEPGKEVLPGDYWTGADAAEKEIIAARERLANEGK HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AETFNVVVEIPRGSKNKYEVDHETGRVFLDRTLFTAMGYPDDYGYIDGTLGEDGDPLDA CCCEEEEEECCCCCCCCEEECCCCCEEEEHHHHHHHCCCCCCCCEECCCCCCCCCCCEE LVMIPNSVFPGCVVECRAVGLYHMVDEAGGDDKVLCVPADVRFDDIKDIDDVNEYHKAEI EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH KHFFEQYKALEPGKEVLPGDYWTGADAAEKEIIAARERLANEGK HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]