| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691197
Identifier: 213691197
GI number: 213691197
Start: 332674
End: 333378
Strand: Reverse
Name: 213691197
Synonym: Blon_0279
Alternate gene names: NA
Gene position: 333378-332674 (Counterclockwise)
Preceding gene: 213691198
Following gene: 213691196
Centisome position: 11.77
GC content: 65.82
Gene sequence:
>705_bases ATGACAGAAATCACCTGGAAGGAATGCAAGAACAAGGTTCTGCGCATGCTGCTGGTCCAGCTGTCGGCCTACGCATTGCT CATCGCGGCCGCGGCCGTCACCCTGCCCGGCGCCGACCCCACCGCCCCCCGGGTCGTCGCATGCCTGACGCTGGTCGTGT TCCTTGTCTTCTGGCCGTTGCGCGGCACGATGCTGGATCGCGTCGTCACCTTGCTGTTCGGCGCGGCCTCCCTGATGTTC GTCACCGTGCCGTTCCCCGCCGGCAAGGTGCCGCCGGACCAGACCGCCGCGGATGGTTCGACGCTTCCGTGGTATTCGTG GGCGTTGGCCATGGGCCTGCTGCTGGTCATGCTGGTGGTCTTCTCGTTCGGACGTCAGATGGCCCGCGAGAAGCGGGACC ATCTCATCCGTGCCCTGTCCCACGCCGTGACTTCCGGCGTGGCGGCTCTCGCCGTGGCCGGCTGGTGCTTCCTGCCTGAT TTGGGCGCAATGCTTGCCAAGGGCACCGTTGCGGGAACCGTTGCCCTGATCATCCTCATCGTTTTGGGACTGGCCTTGGC CGTGGCCTCCACGTTGTGGGTGCGCGACGCCGATCCGGACCCGGATATCCGCTATCCGTGGATCGGCACCGGCCTGATGC CGGTGATGCTGATGGGCGTGACCATCGCCGCAACCGCACTGGTGCTCGGCCGTATCATCGGTTGA
Upstream 100 bases:
>100_bases ACGCATCTCGTCGCCACGGATGGCCATCAATGCTCGACGGCACCGTTCCAACGCCCGACGTAGGATTGACGTAGCGATTC GATTATCTGAGAGGCGTACC
Downstream 100 bases:
>100_bases TGGACGTCCGCCGTTCCATATTCCGCAAACTTGTAACCTATGTGTCCACTACAAGCGCGTAGAATAATGAAAACTTTGCG AAAGCGGCATAACGCCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTEITWKECKNKVLRMLLVQLSAYALLIAAAAVTLPGADPTAPRVVACLTLVVFLVFWPLRGTMLDRVVTLLFGAASLMF VTVPFPAGKVPPDQTAADGSTLPWYSWALAMGLLLVMLVVFSFGRQMAREKRDHLIRALSHAVTSGVAALAVAGWCFLPD LGAMLAKGTVAGTVALIILIVLGLALAVASTLWVRDADPDPDIRYPWIGTGLMPVMLMGVTIAATALVLGRIIG
Sequences:
>Translated_234_residues MTEITWKECKNKVLRMLLVQLSAYALLIAAAAVTLPGADPTAPRVVACLTLVVFLVFWPLRGTMLDRVVTLLFGAASLMF VTVPFPAGKVPPDQTAADGSTLPWYSWALAMGLLLVMLVVFSFGRQMAREKRDHLIRALSHAVTSGVAALAVAGWCFLPD LGAMLAKGTVAGTVALIILIVLGLALAVASTLWVRDADPDPDIRYPWIGTGLMPVMLMGVTIAATALVLGRIIG >Mature_233_residues TEITWKECKNKVLRMLLVQLSAYALLIAAAAVTLPGADPTAPRVVACLTLVVFLVFWPLRGTMLDRVVTLLFGAASLMFV TVPFPAGKVPPDQTAADGSTLPWYSWALAMGLLLVMLVVFSFGRQMAREKRDHLIRALSHAVTSGVAALAVAGWCFLPDL GAMLAKGTVAGTVALIILIVLGLALAVASTLWVRDADPDPDIRYPWIGTGLMPVMLMGVTIAATALVLGRIIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24866; Mature: 24735
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEITWKECKNKVLRMLLVQLSAYALLIAAAAVTLPGADPTAPRVVACLTLVVFLVFWPL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH RGTMLDRVVTLLFGAASLMFVTVPFPAGKVPPDQTAADGSTLPWYSWALAMGLLLVMLVV HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH FSFGRQMAREKRDHLIRALSHAVTSGVAALAVAGWCFLPDLGAMLAKGTVAGTVALIILI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGLALAVASTLWVRDADPDPDIRYPWIGTGLMPVMLMGVTIAATALVLGRIIG HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TEITWKECKNKVLRMLLVQLSAYALLIAAAAVTLPGADPTAPRVVACLTLVVFLVFWPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH RGTMLDRVVTLLFGAASLMFVTVPFPAGKVPPDQTAADGSTLPWYSWALAMGLLLVMLVV HHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH FSFGRQMAREKRDHLIRALSHAVTSGVAALAVAGWCFLPDLGAMLAKGTVAGTVALIILI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGLALAVASTLWVRDADPDPDIRYPWIGTGLMPVMLMGVTIAATALVLGRIIG HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA