| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yebN [C]
Identifier: 213691198
GI number: 213691198
Start: 333488
End: 334066
Strand: Reverse
Name: yebN [C]
Synonym: Blon_0280
Alternate gene names: 213691198
Gene position: 334066-333488 (Counterclockwise)
Preceding gene: 213691199
Following gene: 213691197
Centisome position: 11.79
GC content: 62.0
Gene sequence:
>579_bases ATGATTGCGATAATCGTTCAGACCCTGCTCATTTCCGTCTCCGTCGCCATGGATGCGTTCGCCGTCTCCATCGGCAAGGG GCTCACCGTCTCCCGCGTAAGACCCGGGGATGCCGTCAGATCGGCGCTCTGGTTCGGCGGCTCCCAGGCCCTCTTCCTCA TACTGGGGCATTACGCGGCCTCCGCATTCAGCGCGTATGTAACCGCATTCGATCATTGGATCATCTTCGGTTTGCTGGCG TTCATCGGCGGCAACATGGTGCATGAGGCATACGAGGAGGACGCGGAGAACGCCAAGGAGACCGCGCAATTCGACTGGAA GCACATGCTGCCGCTCGCCGTGGCGTGCAGCATCGACGCCTTCGCCGTGGGCGTGAGTCTGGCGTTCATGGCAACCAGCG TGCCGTTCGCCATCCTCTGCATCAGCGTGGTGACCGGCCTCTTCTCCGCGGCGGGCTTGTACATCGGGCGCGCCTTCGGC GCTCACTGGCAGAAACCCGCGCAGATCGCAGGCGGTGTGGTGTTGATTCTGATCGGCGTCAAAGTGCTGTTGGAGCATCT GGGCGTCATCGCGTTCTGA
Upstream 100 bases:
>100_bases TATAGTGCTGGTGTATTTTTCAGCTAGGCGTAGGCGGCGTGTGGGAACGCTGGTCGAGGCCCATCGTCTGGAGTTCGGGC GATGAACCTTCCATCACATC
Downstream 100 bases:
>100_bases CTTGCCGTCACGCATCTCGTCGCCACGGATGGCCATCAATGCTCGACGGCACCGTTCCAACGCCCGACGTAGGATTGACG TAGCGATTCGATTATCTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MIAIIVQTLLISVSVAMDAFAVSIGKGLTVSRVRPGDAVRSALWFGGSQALFLILGHYAASAFSAYVTAFDHWIIFGLLA FIGGNMVHEAYEEDAENAKETAQFDWKHMLPLAVACSIDAFAVGVSLAFMATSVPFAILCISVVTGLFSAAGLYIGRAFG AHWQKPAQIAGGVVLILIGVKVLLEHLGVIAF
Sequences:
>Translated_192_residues MIAIIVQTLLISVSVAMDAFAVSIGKGLTVSRVRPGDAVRSALWFGGSQALFLILGHYAASAFSAYVTAFDHWIIFGLLA FIGGNMVHEAYEEDAENAKETAQFDWKHMLPLAVACSIDAFAVGVSLAFMATSVPFAILCISVVTGLFSAAGLYIGRAFG AHWQKPAQIAGGVVLILIGVKVLLEHLGVIAF >Mature_192_residues MIAIIVQTLLISVSVAMDAFAVSIGKGLTVSRVRPGDAVRSALWFGGSQALFLILGHYAASAFSAYVTAFDHWIIFGLLA FIGGNMVHEAYEEDAENAKETAQFDWKHMLPLAVACSIDAFAVGVSLAFMATSVPFAILCISVVTGLFSAAGLYIGRAFG AHWQKPAQIAGGVVLILIGVKVLLEHLGVIAF
Specific function: Unknown
COG id: COG1971
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0059 family
Homologues:
Organism=Escherichia coli, GI87081981, Length=183, Percent_Identity=37.7049180327869, Blast_Score=114, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y280_BIFLI (B7GTW5)
Other databases:
- EMBL: CP001095 - RefSeq: YP_002321784.1 - GeneID: 7055148 - GenomeReviews: CP001095_GR - KEGG: bln:Blon_0280 - HOGENOM: HBG709685 - ProtClustDB: CLSK572610 - HAMAP: MF_01521 - InterPro: IPR003810 - InterPro: IPR022929
Pfam domain/function: PF02659 DUF204
EC number: NA
Molecular weight: Translated: 20288; Mature: 20288
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xfd074f4)-; HASH(0x1237f2a8)-; HASH(0x1236f630)-; HASH(0x12379db0)-; HASH(0x11f16678)-; HASH(0x11beca88)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAIIVQTLLISVSVAMDAFAVSIGKGLTVSRVRPGDAVRSALWFGGSQALFLILGHYAA CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHH SAFSAYVTAFDHWIIFGLLAFIGGNMVHEAYEEDAENAKETAQFDWKHMLPLAVACSIDA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH FAVGVSLAFMATSVPFAILCISVVTGLFSAAGLYIGRAFGAHWQKPAQIAGGVVLILIGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH KVLLEHLGVIAF HHHHHHHHHHCH >Mature Secondary Structure MIAIIVQTLLISVSVAMDAFAVSIGKGLTVSRVRPGDAVRSALWFGGSQALFLILGHYAA CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHH SAFSAYVTAFDHWIIFGLLAFIGGNMVHEAYEEDAENAKETAQFDWKHMLPLAVACSIDA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH FAVGVSLAFMATSVPFAILCISVVTGLFSAAGLYIGRAFGAHWQKPAQIAGGVVLILIGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH KVLLEHLGVIAF HHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA