| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691137
Identifier: 213691137
GI number: 213691137
Start: 259543
End: 260709
Strand: Direct
Name: 213691137
Synonym: Blon_0216
Alternate gene names: NA
Gene position: 259543-260709 (Clockwise)
Preceding gene: 213691136
Following gene: 213691139
Centisome position: 9.16
GC content: 65.98
Gene sequence:
>1167_bases GTGAGGCAGACGACTCGCTCCCTCCGGTCCGAACCCACGTCCGCAGGGAGTCGCGGAGGGACGATCGATCCCGTGCGCGT CGGCCTGACGGCGCTGTACATGGTGTTGATGTTCGTGACCGTATACGCGGAGACGTCGATAGCGTGCGATGACCGTTTCC TGGTCTGGCACGCGGCGTTCATCGCATACGAGACGCTGGCACTGTGCGCCGCCGCGCTGTGGCCGGATTCCGGTTCCTGG ATGGTGGTCGGCATTTGGACGGTCAGCACGCTGACGAGCATGCCCACGACGTTCCCGGTCTCCGCGCCCTTCGCCGTGGC GGTCCTCGGCGGATGCGGGCTCGGACGGGGCCTGCTCGCGGCGAGCGTGTGCGTGCTGTCCCGCATGCTCAGCTTCGCGC TGCGCATCGAACCCTGGCCGGGTATGCCCGGAGCGGCCGTTCTGTGTCTCGTGTTCTTCTTGGCGGCGTTCCTCGGGGCG CTGGCCAACGCGCAATACATACGGATGCGGGAACGGGAACGGGAACGGATGCGGGAACGCGACCAGGCGGTCATCGACAG ACTGCATGACCGCGTCTGCAATTCGCTGTCCTTCCTGATTAACGCCTTGGAAGACCGGGCGGCGTCCGGGCTGTCAGGCG GGGACGGATTGCCCGACGACGAGATGCGGCGGATTCTGCAAGAAGCGCTGCGTGACTCGCGCGCGGCCATCACACTGGTC AGGACCCGGGAGGACGCTCCATCGGGCAGCCCCGGACACAGCGAATCGTTCACCTCACTTGCCGAGACGCATGCGAGACG ACTGCGCATGGCAGGAATCAGAGGGGACGTCTTCGTCGACCCGTCCGTCGACCTGCTACTCGACGAGGAGACGATGCGAG ACGCGGTCTCCTTCCTAACGGAGCTTTTCGGCAACATCGGCAAATACGCCGACCCGGACGCCGGCTATGTGATGAGCGTG GGCGTGCACGCGGACGGATTGCATATCGATGAAAGCAACCTCGTACGGACTGCGGGCCCGGACGATGACGGGCTGCTTTC CAACGGCGACGGGCTGCGCCGGTACCGGAGGATCATCGAGGCCCGCGGGGGACAACTGGCGGCGGGCGCGGACGACGGCA TATGGTCCGTGCAGAGCCTATGGCCGCTACGACGGTCCACGTCATGA
Upstream 100 bases:
>100_bases GCAACACCGTGATGACGTACAGCCACCGCGCGCTGCGCAAGCTGCATGCGGAGAATCGGGAGGAGGCGATGGAGAAATGC GGCCGGTACGATCTGTTCAA
Downstream 100 bases:
>100_bases ACGATACGGTGCCGGGACCCGCGACGACGGACAAGCGCCGACGCACGACCGGCGGACGGTGACGAGACCGGACGCCCCGA GTATCTTGGGGGCCGGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MRQTTRSLRSEPTSAGSRGGTIDPVRVGLTALYMVLMFVTVYAETSIACDDRFLVWHAAFIAYETLALCAAALWPDSGSW MVVGIWTVSTLTSMPTTFPVSAPFAVAVLGGCGLGRGLLAASVCVLSRMLSFALRIEPWPGMPGAAVLCLVFFLAAFLGA LANAQYIRMRERERERMRERDQAVIDRLHDRVCNSLSFLINALEDRAASGLSGGDGLPDDEMRRILQEALRDSRAAITLV RTREDAPSGSPGHSESFTSLAETHARRLRMAGIRGDVFVDPSVDLLLDEETMRDAVSFLTELFGNIGKYADPDAGYVMSV GVHADGLHIDESNLVRTAGPDDDGLLSNGDGLRRYRRIIEARGGQLAAGADDGIWSVQSLWPLRRSTS
Sequences:
>Translated_388_residues MRQTTRSLRSEPTSAGSRGGTIDPVRVGLTALYMVLMFVTVYAETSIACDDRFLVWHAAFIAYETLALCAAALWPDSGSW MVVGIWTVSTLTSMPTTFPVSAPFAVAVLGGCGLGRGLLAASVCVLSRMLSFALRIEPWPGMPGAAVLCLVFFLAAFLGA LANAQYIRMRERERERMRERDQAVIDRLHDRVCNSLSFLINALEDRAASGLSGGDGLPDDEMRRILQEALRDSRAAITLV RTREDAPSGSPGHSESFTSLAETHARRLRMAGIRGDVFVDPSVDLLLDEETMRDAVSFLTELFGNIGKYADPDAGYVMSV GVHADGLHIDESNLVRTAGPDDDGLLSNGDGLRRYRRIIEARGGQLAAGADDGIWSVQSLWPLRRSTS >Mature_388_residues MRQTTRSLRSEPTSAGSRGGTIDPVRVGLTALYMVLMFVTVYAETSIACDDRFLVWHAAFIAYETLALCAAALWPDSGSW MVVGIWTVSTLTSMPTTFPVSAPFAVAVLGGCGLGRGLLAASVCVLSRMLSFALRIEPWPGMPGAAVLCLVFFLAAFLGA LANAQYIRMRERERERMRERDQAVIDRLHDRVCNSLSFLINALEDRAASGLSGGDGLPDDEMRRILQEALRDSRAAITLV RTREDAPSGSPGHSESFTSLAETHARRLRMAGIRGDVFVDPSVDLLLDEETMRDAVSFLTELFGNIGKYADPDAGYVMSV GVHADGLHIDESNLVRTAGPDDDGLLSNGDGLRRYRRIIEARGGQLAAGADDGIWSVQSLWPLRRSTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42131; Mature: 42131
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQTTRSLRSEPTSAGSRGGTIDPVRVGLTALYMVLMFVTVYAETSIACDDRFLVWHAAF CCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH IAYETLALCAAALWPDSGSWMVVGIWTVSTLTSMPTTFPVSAPFAVAVLGGCGLGRGLLA HHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHH ASVCVLSRMLSFALRIEPWPGMPGAAVLCLVFFLAAFLGALANAQYIRMRERERERMRER HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH DQAVIDRLHDRVCNSLSFLINALEDRAASGLSGGDGLPDDEMRRILQEALRDSRAAITLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEEE RTREDAPSGSPGHSESFTSLAETHARRLRMAGIRGDVFVDPSVDLLLDEETMRDAVSFLT EECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEECHHHHHHHHHHHH ELFGNIGKYADPDAGYVMSVGVHADGLHIDESNLVRTAGPDDDGLLSNGDGLRRYRRIIE HHHHHHCCCCCCCCCEEEEECCCCCCCEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHH ARGGQLAAGADDGIWSVQSLWPLRRSTS HCCCEEECCCCCCCHHHHHHHCHHCCCC >Mature Secondary Structure MRQTTRSLRSEPTSAGSRGGTIDPVRVGLTALYMVLMFVTVYAETSIACDDRFLVWHAAF CCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH IAYETLALCAAALWPDSGSWMVVGIWTVSTLTSMPTTFPVSAPFAVAVLGGCGLGRGLLA HHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHH ASVCVLSRMLSFALRIEPWPGMPGAAVLCLVFFLAAFLGALANAQYIRMRERERERMRER HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH DQAVIDRLHDRVCNSLSFLINALEDRAASGLSGGDGLPDDEMRRILQEALRDSRAAITLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEEE RTREDAPSGSPGHSESFTSLAETHARRLRMAGIRGDVFVDPSVDLLLDEETMRDAVSFLT EECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEECHHHHHHHHHHHH ELFGNIGKYADPDAGYVMSVGVHADGLHIDESNLVRTAGPDDDGLLSNGDGLRRYRRIIE HHHHHHCCCCCCCCCEEEEECCCCCCCEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHH ARGGQLAAGADDGIWSVQSLWPLRRSTS HCCCEEECCCCCCCHHHHHHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA