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The map label for this gene is pepD [H]

Identifier: 213691139

GI number: 213691139

Start: 261221

End: 262858

Strand: Direct

Name: pepD [H]

Synonym: Blon_0218

Alternate gene names: 213691139

Gene position: 261221-262858 (Clockwise)

Preceding gene: 213691137

Following gene: 213691142

Centisome position: 9.22

GC content: 63.49

Gene sequence:

>1638_bases
ATGAGAGCGGGGCGCGTCGGCCGCGTCGCCTGCCGACCAGTCCGGCTCCTACCATGGTGTTCCATGTCATGCACCACGAT
CCTTGTCGGCAAAAACGCAAGCTACGACGGCTCCACCATCATCGCCCGCGACGATGATTCCGGTTCCGGTCGTTACGATC
CCAAACGATTCATCGCAGTCGCCCCCGCCGATCAGCCGCGCCACTACCGCAGCGTGCTGAGCCATGTCGAAATCGACCTG
CCGGACGATCCTTGCCGGTACACCATCGCCCCCAACGTTCTGAACAATCGCGGCATTCTGGCCGAAGCCGGCGCCAACGA
ACACAACGTGGCGATGAGCGCGACCGAAACCATCGCCGTCAACGAGCGCGTGCTCGGCGCGGATCCGATGGTCGAGCTCA
AGCCGGCCCACGGCGAGCCCGGCGACGTCGACCATCGCGACGAACGGCCGGGCGGCATCGGCGAGGAAGACATCATCACC
CTCGTGCTGCCATACGTCGCCACCGCGCGCGAGGGCGTCATCCGCCTGGGCGAACTGCTCGAAACCTACGGCACGTACGA
GTCGAACGGCGTGATCATCTCCGACGTGGACGAAATCTGGTACGTCGAGACCATCGGCGGGCATCATTGGATCGCCCGCC
GGGTTCCCGACGACTGCTACGCCACGATCCCCAACCAGCTCGGCATCGACGATTTCGATCTCGCCGACGCGTTCGGCGAA
CGGCGCGAATATCTGTGCAGCGCCGATCTGCGCGAGTTCATGGCCGCGCATCATCTCGACCGCACCATGGACGCCGCGCC
GGGCCATTTCAACCCGCGCAAGGCGTTCGGCACGGCGACGCCGAAGGATCACATCTACAACACGCCCCGCGCCTGGTACA
TGCAGCGCCACCTCAACCCCAGCGAGGATTGGGATTCGCCGGCCGCCCGCCACACGCCGGAGTCCGACGACATTCCCTGG
TGCCGCGTGCCGGAAGCCAAGATAAGCCTCGAAGACGTCGATTTCCTGCTGTCCTCGCATTTCGAAGGCACGCCATATGA
TCCGTACGGCACGGCAGGCACGGCGGAAAGCCGTCATCGTTACCGTCCGATCGGCATCAACCGCACCGGGCATATGGTGG
CGATTCAGGTGCGCCCGTATGCGCCGGCCGTCAACCGCACGGTGATGTGGGTGTCGTTCGGTTCCGGCCCGTTCACCGCC
GCGGCGCCGTTCTACGCGAACGTCAACGATACGCCCGCCTACCTGCGCGACACCACGCCGGAAGTCTCGACCGGCAACCT
GTACTGGGCGAACCGTCTGATCGCCGCGCTCGCCGACGCGCATTTCTACGAAACCAGCAATGCGATCGAAGGATTTGCGG
AATCGGCCCGCGCGTACGGCCATCGTCTGGTGGAACGTACCGATGCCGAATTGCGTGAGATGACCGCGCAAACGAGCGCG
TCTGAATCGCAAGAGAGTGCAGGAGCCGCGGAGATTACGGAAAACGCCAGTATTGCAACCATCGCCAGACTGCAGCAGTC
CAACGAGGAAATGGCGGAATACTTGCGCACTCACGTTACGAAACTGCTCAACGACGTGCTCTACACGTCCAGCAACCTCA
TGCACAACAGTTTCGCCATGTCCGACCGCTGGAACTGA

Upstream 100 bases:

>100_bases
AAATCGCTCATTGCCGCCTCCTCAAGTGGTCGATTTCGTTCATGAACTTCTTGGTCGGCGGCCAATGGGAGCCGGCAGAC
CAAGCTCCAAGGGCATCGTC

Downstream 100 bases:

>100_bases
GCATAAAGCCCCGAAATCCGGCAAAACCCGTCCCAATGAGCCAGGTTTCCGCGCTCGGGGAGGTTCCGCATGAACGTAGG
CTGTTGGAAGCGTCAGTGCT

Product: peptidase U34, dipeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MRAGRVGRVACRPVRLLPWCSMSCTTILVGKNASYDGSTIIARDDDSGSGRYDPKRFIAVAPADQPRHYRSVLSHVEIDL
PDDPCRYTIAPNVLNNRGILAEAGANEHNVAMSATETIAVNERVLGADPMVELKPAHGEPGDVDHRDERPGGIGEEDIIT
LVLPYVATAREGVIRLGELLETYGTYESNGVIISDVDEIWYVETIGGHHWIARRVPDDCYATIPNQLGIDDFDLADAFGE
RREYLCSADLREFMAAHHLDRTMDAAPGHFNPRKAFGTATPKDHIYNTPRAWYMQRHLNPSEDWDSPAARHTPESDDIPW
CRVPEAKISLEDVDFLLSSHFEGTPYDPYGTAGTAESRHRYRPIGINRTGHMVAIQVRPYAPAVNRTVMWVSFGSGPFTA
AAPFYANVNDTPAYLRDTTPEVSTGNLYWANRLIAALADAHFYETSNAIEGFAESARAYGHRLVERTDAELREMTAQTSA
SESQESAGAAEITENASIATIARLQQSNEEMAEYLRTHVTKLLNDVLYTSSNLMHNSFAMSDRWN

Sequences:

>Translated_545_residues
MRAGRVGRVACRPVRLLPWCSMSCTTILVGKNASYDGSTIIARDDDSGSGRYDPKRFIAVAPADQPRHYRSVLSHVEIDL
PDDPCRYTIAPNVLNNRGILAEAGANEHNVAMSATETIAVNERVLGADPMVELKPAHGEPGDVDHRDERPGGIGEEDIIT
LVLPYVATAREGVIRLGELLETYGTYESNGVIISDVDEIWYVETIGGHHWIARRVPDDCYATIPNQLGIDDFDLADAFGE
RREYLCSADLREFMAAHHLDRTMDAAPGHFNPRKAFGTATPKDHIYNTPRAWYMQRHLNPSEDWDSPAARHTPESDDIPW
CRVPEAKISLEDVDFLLSSHFEGTPYDPYGTAGTAESRHRYRPIGINRTGHMVAIQVRPYAPAVNRTVMWVSFGSGPFTA
AAPFYANVNDTPAYLRDTTPEVSTGNLYWANRLIAALADAHFYETSNAIEGFAESARAYGHRLVERTDAELREMTAQTSA
SESQESAGAAEITENASIATIARLQQSNEEMAEYLRTHVTKLLNDVLYTSSNLMHNSFAMSDRWN
>Mature_545_residues
MRAGRVGRVACRPVRLLPWCSMSCTTILVGKNASYDGSTIIARDDDSGSGRYDPKRFIAVAPADQPRHYRSVLSHVEIDL
PDDPCRYTIAPNVLNNRGILAEAGANEHNVAMSATETIAVNERVLGADPMVELKPAHGEPGDVDHRDERPGGIGEEDIIT
LVLPYVATAREGVIRLGELLETYGTYESNGVIISDVDEIWYVETIGGHHWIARRVPDDCYATIPNQLGIDDFDLADAFGE
RREYLCSADLREFMAAHHLDRTMDAAPGHFNPRKAFGTATPKDHIYNTPRAWYMQRHLNPSEDWDSPAARHTPESDDIPW
CRVPEAKISLEDVDFLLSSHFEGTPYDPYGTAGTAESRHRYRPIGINRTGHMVAIQVRPYAPAVNRTVMWVSFGSGPFTA
AAPFYANVNDTPAYLRDTTPEVSTGNLYWANRLIAALADAHFYETSNAIEGFAESARAYGHRLVERTDAELREMTAQTSA
SESQESAGAAEITENASIATIARLQQSNEEMAEYLRTHVTKLLNDVLYTSSNLMHNSFAMSDRWN

Specific function: Hydrolyzes a wide range of dipeptides. Highest activity against Ala-Gln [H]

COG id: COG4690

COG function: function code E; Dipeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C69 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005322 [H]

Pfam domain/function: PF03577 Peptidase_C69 [H]

EC number: NA

Molecular weight: Translated: 60501; Mature: 60501

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGRVGRVACRPVRLLPWCSMSCTTILVGKNASYDGSTIIARDDDSGSGRYDPKRFIAV
CCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEE
APADQPRHYRSVLSHVEIDLPDDPCRYTIAPNVLNNRGILAEAGANEHNVAMSATETIAV
CCCCCCHHHHHHHHHEEECCCCCCCEEEECCCCCCCCCEEEECCCCCCCEEEECCEEEEE
NERVLGADPMVELKPAHGEPGDVDHRDERPGGIGEEDIITLVLPYVATAREGVIRLGELL
CCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ETYGTYESNGVIISDVDEIWYVETIGGHHWIARRVPDDCYATIPNQLGIDDFDLADAFGE
HHHCCCCCCCEEEEECCCEEEEEECCCCEEEHHCCCCHHHHHCCCCCCCCCHHHHHHHHH
RREYLCSADLREFMAAHHLDRTMDAAPGHFNPRKAFGTATPKDHIYNTPRAWYMQRHLNP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHCCCCCHHHHHHHCCCC
SEDWDSPAARHTPESDDIPWCRVPEAKISLEDVDFLLSSHFEGTPYDPYGTAGTAESRHR
CCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
YRPIGINRTGHMVAIQVRPYAPAVNRTVMWVSFGSGPFTAAAPFYANVNDTPAYLRDTTP
CCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCHHHCCCCC
EVSTGNLYWANRLIAALADAHFYETSNAIEGFAESARAYGHRLVERTDAELREMTAQTSA
CCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SESQESAGAAEITENASIATIARLQQSNEEMAEYLRTHVTKLLNDVLYTSSNLMHNSFAM
CHHHHHCCCHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
SDRWN
CCCCC
>Mature Secondary Structure
MRAGRVGRVACRPVRLLPWCSMSCTTILVGKNASYDGSTIIARDDDSGSGRYDPKRFIAV
CCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEE
APADQPRHYRSVLSHVEIDLPDDPCRYTIAPNVLNNRGILAEAGANEHNVAMSATETIAV
CCCCCCHHHHHHHHHEEECCCCCCCEEEECCCCCCCCCEEEECCCCCCCEEEECCEEEEE
NERVLGADPMVELKPAHGEPGDVDHRDERPGGIGEEDIITLVLPYVATAREGVIRLGELL
CCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ETYGTYESNGVIISDVDEIWYVETIGGHHWIARRVPDDCYATIPNQLGIDDFDLADAFGE
HHHCCCCCCCEEEEECCCEEEEEECCCCEEEHHCCCCHHHHHCCCCCCCCCHHHHHHHHH
RREYLCSADLREFMAAHHLDRTMDAAPGHFNPRKAFGTATPKDHIYNTPRAWYMQRHLNP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHCCCCCHHHHHHHCCCC
SEDWDSPAARHTPESDDIPWCRVPEAKISLEDVDFLLSSHFEGTPYDPYGTAGTAESRHR
CCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
YRPIGINRTGHMVAIQVRPYAPAVNRTVMWVSFGSGPFTAAAPFYANVNDTPAYLRDTTP
CCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCHHHCCCCC
EVSTGNLYWANRLIAALADAHFYETSNAIEGFAESARAYGHRLVERTDAELREMTAQTSA
CCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SESQESAGAAEITENASIATIARLQQSNEEMAEYLRTHVTKLLNDVLYTSSNLMHNSFAM
CHHHHHCCCHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
SDRWN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12381787 [H]