| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691135
Identifier: 213691135
GI number: 213691135
Start: 257579
End: 258841
Strand: Direct
Name: 213691135
Synonym: Blon_0214
Alternate gene names: NA
Gene position: 257579-258841 (Clockwise)
Preceding gene: 213691132
Following gene: 213691136
Centisome position: 9.09
GC content: 63.02
Gene sequence:
>1263_bases ATGAGCATGGACGAATGCGGTGAGACACCCCTGATGCGTCAACGGGAATACCGGTATTGGTTCCTGTGCGACACCTCGTC GCAAATCGGCGTCGTGGTCGGCGGCTTCGCATTCACACTTCTCGGCTACACGGTCACCCATAATTATGTGCTGAGCGGCC TGGCAGGCACGCTCAATTCGCTGGTGACGGCATTCATGGTCATCCCCGGCGGCATCATCTCCGACTATCACGACCGTAGG CGCCTGATCATTCTATCCGGGGCATTCGCCGCCGCGCTTGACGCCGCGCTGGCACTGACGCTGTTGGCGGGACGCATGTC AGCTCCCCTGCTTTTCGTGTTCGTGACGGCCAACGGCGCGCTGTCGGGGTTGTTCTCCAACACGACCAACGTCGCACTCC CGCAGGTCGTGGAGAAAAACCAGCTGGCCGACGCGACCGCGGCGAACCAGTCGCGCGATGCGGTATTGCAACTCGCCGCT TCACCGTTGGCCGGTCTGCTGTACGGCGTGAGCGCCGCGCTTCCCCTCGCCGTGGCCTGCGCGTCTCGCGCCCTGCAATC CGTATTCGGCATGGCATTGCGCTGCGACCTGCGTCCCCACCCTCGGAACCATGGAGAGGACGGTGGGCCGGCCGTCCTCC GGGACGGTCTCGAGGGGGCGCGCTGGTACGCGCGCAACGGGCGGGCCCGTCTCATACTGCTGCTGATCGTCGTCCAGGTT ATGGTACTAAGCATGTGCGGGACGGTCGTGGTCCTGTACCAGCAGTCGCTCGGCACGACGTCTCTGATGCTGGGCGTGAT ACAGACGTTCCAGGGAGTCGGCATGCTTCTAGGCGGCGTCATCGGCATGAGGCTCGTCCGCGAGCTCGCCGGACGGACGG TGTTCGTATTGACGTCGCTTGCATTCGTCACCAGCTTCTCGCTGATGTCGCTCACCGCGTCACCATGGATACTTGCGCTG CTGGGTTTTTGCGCCTCGGTGCCCCTCATCCCGCTCAATTCCATGATTGAGACCTACCTCATGCTACTGATTCCGATCAG CCTGCGAGGGCGTGTCGGAGCAGTCAACGTGCTGTTCATGTCCGTCGCGCAGAGCGTGTCCTCAGTCGCTGCCGGTACTC TGCTGCATATTGTGGGATACCGGGGCGCCCTGCTGCTCCCGCTGGCGATAATGTTCGTGGTGAGCATGATGGCATGCTCG ACGCCTGCGATCGGTGGCATGCCCGGACTGTCGCGTATGGACAGCCTCGAGACGCTGTCGTGA
Upstream 100 bases:
>100_bases ACACTGCTGACAGAAGGAATTCAACGAAGACAGATGAAATGTCTTTCATCACTGGGAATACGGTTGAGGTCATGTCTTGG AGCAGAGAAGAAGGTGTCCG
Downstream 100 bases:
>100_bases TCCCGGCGCATCCCGCGAATCGAGAGGAGATGTGGAATGCCTTCATCCGAGCATGCCGACGGGCCGGCCGCCGTGGTGGT CCTCGACAACGACCCATTCG
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: Transporter Facilitator Family; Facilitator Transporter
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MSMDECGETPLMRQREYRYWFLCDTSSQIGVVVGGFAFTLLGYTVTHNYVLSGLAGTLNSLVTAFMVIPGGIISDYHDRR RLIILSGAFAAALDAALALTLLAGRMSAPLLFVFVTANGALSGLFSNTTNVALPQVVEKNQLADATAANQSRDAVLQLAA SPLAGLLYGVSAALPLAVACASRALQSVFGMALRCDLRPHPRNHGEDGGPAVLRDGLEGARWYARNGRARLILLLIVVQV MVLSMCGTVVVLYQQSLGTTSLMLGVIQTFQGVGMLLGGVIGMRLVRELAGRTVFVLTSLAFVTSFSLMSLTASPWILAL LGFCASVPLIPLNSMIETYLMLLIPISLRGRVGAVNVLFMSVAQSVSSVAAGTLLHIVGYRGALLLPLAIMFVVSMMACS TPAIGGMPGLSRMDSLETLS
Sequences:
>Translated_420_residues MSMDECGETPLMRQREYRYWFLCDTSSQIGVVVGGFAFTLLGYTVTHNYVLSGLAGTLNSLVTAFMVIPGGIISDYHDRR RLIILSGAFAAALDAALALTLLAGRMSAPLLFVFVTANGALSGLFSNTTNVALPQVVEKNQLADATAANQSRDAVLQLAA SPLAGLLYGVSAALPLAVACASRALQSVFGMALRCDLRPHPRNHGEDGGPAVLRDGLEGARWYARNGRARLILLLIVVQV MVLSMCGTVVVLYQQSLGTTSLMLGVIQTFQGVGMLLGGVIGMRLVRELAGRTVFVLTSLAFVTSFSLMSLTASPWILAL LGFCASVPLIPLNSMIETYLMLLIPISLRGRVGAVNVLFMSVAQSVSSVAAGTLLHIVGYRGALLLPLAIMFVVSMMACS TPAIGGMPGLSRMDSLETLS >Mature_419_residues SMDECGETPLMRQREYRYWFLCDTSSQIGVVVGGFAFTLLGYTVTHNYVLSGLAGTLNSLVTAFMVIPGGIISDYHDRRR LIILSGAFAAALDAALALTLLAGRMSAPLLFVFVTANGALSGLFSNTTNVALPQVVEKNQLADATAANQSRDAVLQLAAS PLAGLLYGVSAALPLAVACASRALQSVFGMALRCDLRPHPRNHGEDGGPAVLRDGLEGARWYARNGRARLILLLIVVQVM VLSMCGTVVVLYQQSLGTTSLMLGVIQTFQGVGMLLGGVIGMRLVRELAGRTVFVLTSLAFVTSFSLMSLTASPWILALL GFCASVPLIPLNSMIETYLMLLIPISLRGRVGAVNVLFMSVAQSVSSVAAGTLLHIVGYRGALLLPLAIMFVVSMMACST PAIGGMPGLSRMDSLETLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44381; Mature: 44250
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMDECGETPLMRQREYRYWFLCDTSSQIGVVVGGFAFTLLGYTVTHNYVLSGLAGTLNS CCCCCCCCCCCHHCCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH LVTAFMVIPGGIISDYHDRRRLIILSGAFAAALDAALALTLLAGRMSAPLLFVFVTANGA HHHHHHHHCCHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCH LSGLFSNTTNVALPQVVEKNQLADATAANQSRDAVLQLAASPLAGLLYGVSAALPLAVAC HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASRALQSVFGMALRCDLRPHPRNHGEDGGPAVLRDGLEGARWYARNGRARLILLLIVVQV HHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHCCCCHHHHHHHHHHHH MVLSMCGTVVVLYQQSLGTTSLMLGVIQTFQGVGMLLGGVIGMRLVRELAGRTVFVLTSL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AFVTSFSLMSLTASPWILALLGFCASVPLIPLNSMIETYLMLLIPISLRGRVGAVNVLFM HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH SVAQSVSSVAAGTLLHIVGYRGALLLPLAIMFVVSMMACSTPAIGGMPGLSRMDSLETLS HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure SMDECGETPLMRQREYRYWFLCDTSSQIGVVVGGFAFTLLGYTVTHNYVLSGLAGTLNS CCCCCCCCCCHHCCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH LVTAFMVIPGGIISDYHDRRRLIILSGAFAAALDAALALTLLAGRMSAPLLFVFVTANGA HHHHHHHHCCHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCH LSGLFSNTTNVALPQVVEKNQLADATAANQSRDAVLQLAASPLAGLLYGVSAALPLAVAC HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASRALQSVFGMALRCDLRPHPRNHGEDGGPAVLRDGLEGARWYARNGRARLILLLIVVQV HHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHCCCCHHHHHHHHHHHH MVLSMCGTVVVLYQQSLGTTSLMLGVIQTFQGVGMLLGGVIGMRLVRELAGRTVFVLTSL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AFVTSFSLMSLTASPWILALLGFCASVPLIPLNSMIETYLMLLIPISLRGRVGAVNVLFM HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH SVAQSVSSVAAGTLLHIVGYRGALLLPLAIMFVVSMMACSTPAIGGMPGLSRMDSLETLS HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA