Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213691132

Identifier: 213691132

GI number: 213691132

Start: 255954

End: 256520

Strand: Direct

Name: 213691132

Synonym: Blon_0211

Alternate gene names: NA

Gene position: 255954-256520 (Clockwise)

Preceding gene: 213691128

Following gene: 213691135

Centisome position: 9.04

GC content: 63.84

Gene sequence:

>567_bases
ATGGCCACGGCATGGGGCGACGAGAGCGTTCGCAAGTCGAACGTGCCCGAGTCCATGTATCTCATGGGGGCGTGCGTCTG
CGACCTCGACGAGGATTTCACCCGCTCCCGGCTCAATACCGTCAAACCCAGAGACGCAAGCAAGCTCCATTGGCGGGACA
TGCAGCCCAAGCTGCGATTCAAAGCCATCGACGCCATCTCCGGCCTCGGGCTCACTCACGTCATCGTCGCGGCGATTCCC
CTAGGCGATTGGAACACTGCCGAACGTGCGAGAAGGAAGTGCCTGGAAACCCTGCTGCCGGTGCTGGAACGCGAGTATTC
GGTTGATCGCCTCGTGCTGGAGCGGCGCGACAAGGCCCAGGACGCCAGGGACATCCGTTTCATCGACGCGTTGAGAAGCC
GGCGCTTCATCGACTCCATCCGGGTCGATCTCGTGGCAGGTGCCGCCGACGCCAGGCTGTGGCTGCCCGACCAGCTGCTC
GGCTCCTACGGCGACTGGCGGGCCGGCGAGCACCAATATGATGGATTCCTTGCCTCCGTGCGCGCCATCGTTATCAGCGC
CGGGTGA

Upstream 100 bases:

>100_bases
CTACCTATGCCCTCCGTTGGGCTGTAGCCGTCAGGCAAAAACCTGTCTAACCGCTAGTATCGAAACCCTTGGCGGATTAC
ATAATCGGAGGGATGGTTCG

Downstream 100 bases:

>100_bases
ACGTCTTTGAAAGGCGTTACACTGTAACCAAGCCAACCCCGCTGGGGAAATGGAAGTGAGAGCCGGACGCCCCGAGTATC
TTGGGGGCCGGCTCTTGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MATAWGDESVRKSNVPESMYLMGACVCDLDEDFTRSRLNTVKPRDASKLHWRDMQPKLRFKAIDAISGLGLTHVIVAAIP
LGDWNTAERARRKCLETLLPVLEREYSVDRLVLERRDKAQDARDIRFIDALRSRRFIDSIRVDLVAGAADARLWLPDQLL
GSYGDWRAGEHQYDGFLASVRAIVISAG

Sequences:

>Translated_188_residues
MATAWGDESVRKSNVPESMYLMGACVCDLDEDFTRSRLNTVKPRDASKLHWRDMQPKLRFKAIDAISGLGLTHVIVAAIP
LGDWNTAERARRKCLETLLPVLEREYSVDRLVLERRDKAQDARDIRFIDALRSRRFIDSIRVDLVAGAADARLWLPDQLL
GSYGDWRAGEHQYDGFLASVRAIVISAG
>Mature_187_residues
ATAWGDESVRKSNVPESMYLMGACVCDLDEDFTRSRLNTVKPRDASKLHWRDMQPKLRFKAIDAISGLGLTHVIVAAIPL
GDWNTAERARRKCLETLLPVLEREYSVDRLVLERRDKAQDARDIRFIDALRSRRFIDSIRVDLVAGAADARLWLPDQLLG
SYGDWRAGEHQYDGFLASVRAIVISAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21272; Mature: 21140

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATAWGDESVRKSNVPESMYLMGACVCDLDEDFTRSRLNTVKPRDASKLHWRDMQPKLRF
CCCCCCCCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
KAIDAISGLGLTHVIVAAIPLGDWNTAERARRKCLETLLPVLEREYSVDRLVLERRDKAQ
HHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DARDIRFIDALRSRRFIDSIRVDLVAGAADARLWLPDQLLGSYGDWRAGEHQYDGFLASV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCCCCCCCCHHHHHHHHHH
RAIVISAG
HHHHEECC
>Mature Secondary Structure 
ATAWGDESVRKSNVPESMYLMGACVCDLDEDFTRSRLNTVKPRDASKLHWRDMQPKLRF
CCCCCCCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
KAIDAISGLGLTHVIVAAIPLGDWNTAERARRKCLETLLPVLEREYSVDRLVLERRDKAQ
HHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DARDIRFIDALRSRRFIDSIRVDLVAGAADARLWLPDQLLGSYGDWRAGEHQYDGFLASV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCCCCCCCCHHHHHHHHHH
RAIVISAG
HHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA