| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691116
Identifier: 213691116
GI number: 213691116
Start: 232623
End: 234266
Strand: Direct
Name: 213691116
Synonym: Blon_0195
Alternate gene names: NA
Gene position: 232623-234266 (Clockwise)
Preceding gene: 213691115
Following gene: 213691117
Centisome position: 8.21
GC content: 62.41
Gene sequence:
>1644_bases ATGAACGAGGGGACAGCGGCCGACGTAACCGCAGCACATGGCGGCCGGTCGCGCCAATCGAAGAAACACTCAAAGACGTA CCGCAGCATATCCGCGATCCTTAGTTGGCTCACGGCCCGCCGCCCGACCACGTTATCCACATCGCTGCGCGCGCGATTCC TCCCTTACCTGCTCACGCTCGCTATCGCCTGGCTGCCGTGGCTCATACTCACCTGGCCGGGCTCGATGCGCGACGATACG CTTGCCCAATATCTGCAATCGTCCGGTCTGCACCACTACTACACCCAGCATCCGCTGTTTGATACTCTCACGTTCGGCTT GTTCTGGCATATCGGCAGCGCACTCGGCTCCCCTCTGATCGGGCAGGCCCTGTACACCGTGACCCAAGCGGTTCTACTCG CCGCCGGGTGCGCGCTTCTGCTGTGCTACATCCGCAAAATCGGCTCGCCGCGCTGGCTCATCGGTCTCGGCCTCGTCTAT CTTGCCACCAACTATGTGGTGGTCGGTGCAATCACCACGATGGGTAAGGACTCGTTGCACGCCGTGTTCTATCTGCCGTT GGCCGTGCTGTTCGTGGAGGCTTGTCTGACGCGCGGCTCGGTACTGGCTCGCCGCCCGGTGGCATTCGCGTTCGTCATCC TGTTGTTCGCCACCATCGTCTCCAAGCGGACGGCGCTCATAATCGTGCTATGCGCCGGCTGCTGTTTGCTCGCCGTCTGC ACGCCCAAAGGCGCGCGGCGTCGTGCGTTCGCGTGTCTTGCGGTTGCCATCGTTGTGGCGCAGGGTGTGTGGACGCCATT AAGCGCGGCCGCCACGCATGCGAATCGATCGCCCGGACGTGAGGTGTGGGGCCTGGTCACCCAGCCCGTGGCCCGGCTCG CGCACGATGATCCCAGTGCGATAGACAAGGTTCAGCGGCGGCGACTGAACGCAATCATGGATCTCGACTGGGCCGCCGCC GGCATCAACCCGCACCGCACCGATGAGACCTTCCGCACTCTGCGCGAGCACCCTAGGCCAACCGCGGCGCAACAACTCGC GGCCCTGCAGGTCTGGGCGCAGCTCGGCCTCGCGCATCCGACTGAATATGCCACGGCCTATGCCGGGGTGACTCGCGGAT GGTGGGACCCGCGCGTCAATTTCGCGTACCCCACTGATTCCGACTACCTGTTCACGCCTGGCTATCTCAGGCAATGGGCA TCTTTCCTGACTGAAGGTGCTTGGAAGCATACTTCCGACGGCGATGCCGATACCGTGGCAGCCGAACGGCTTGCCGCCAT CGAACATGACCTTGCGCCGCTGAGGGGTACCTCCGATAAGCCGCAATGGCAGAAAAATATATTGCGGGCGATTCATCGGT GGGCGCGTTCGGATGGTCGCGTCGGTGTTCGTAAAGGCAATCTGCTGACTTCGATGGCCCTGTACGTCACGTGGATTCCG CTGGCTGCGGGTCTTGCGCTGGTGGTGCGGCCTGCGCGACGACGCTACGGCCCCGCACTGGCCGCTTACGGTTTGTTGGC ATTCACGGTGCTGTCGCTGTATGCCTCACCCATGGCACTATTTTGGTATCCGATTCCGGTATTCCTCGCGTTGCCGCTTT TTGTGGTGTTACCGTTCACATTCCGGGAGAGCCATCCTCTCTGA
Upstream 100 bases:
>100_bases CGCGCACCTACACAACCACCGGTAAAGAAATCACCGTGTCCAGGTGAATTTTCGATGTTCGCCCGGCGCGCGCCCGCAAT CGCGCCTAGGCTGTGGAGTC
Downstream 100 bases:
>100_bases GCATAGTTATCTCAGATAGTGAAATAATTGCGGGGTTGAAAAGCACTAAAACGCCTTCTATTACCTCGCACCCGTCAAAA AATCAAGACTGTTGTTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MNEGTAADVTAAHGGRSRQSKKHSKTYRSISAILSWLTARRPTTLSTSLRARFLPYLLTLAIAWLPWLILTWPGSMRDDT LAQYLQSSGLHHYYTQHPLFDTLTFGLFWHIGSALGSPLIGQALYTVTQAVLLAAGCALLLCYIRKIGSPRWLIGLGLVY LATNYVVVGAITTMGKDSLHAVFYLPLAVLFVEACLTRGSVLARRPVAFAFVILLFATIVSKRTALIIVLCAGCCLLAVC TPKGARRRAFACLAVAIVVAQGVWTPLSAAATHANRSPGREVWGLVTQPVARLAHDDPSAIDKVQRRRLNAIMDLDWAAA GINPHRTDETFRTLREHPRPTAAQQLAALQVWAQLGLAHPTEYATAYAGVTRGWWDPRVNFAYPTDSDYLFTPGYLRQWA SFLTEGAWKHTSDGDADTVAAERLAAIEHDLAPLRGTSDKPQWQKNILRAIHRWARSDGRVGVRKGNLLTSMALYVTWIP LAAGLALVVRPARRRYGPALAAYGLLAFTVLSLYASPMALFWYPIPVFLALPLFVVLPFTFRESHPL
Sequences:
>Translated_547_residues MNEGTAADVTAAHGGRSRQSKKHSKTYRSISAILSWLTARRPTTLSTSLRARFLPYLLTLAIAWLPWLILTWPGSMRDDT LAQYLQSSGLHHYYTQHPLFDTLTFGLFWHIGSALGSPLIGQALYTVTQAVLLAAGCALLLCYIRKIGSPRWLIGLGLVY LATNYVVVGAITTMGKDSLHAVFYLPLAVLFVEACLTRGSVLARRPVAFAFVILLFATIVSKRTALIIVLCAGCCLLAVC TPKGARRRAFACLAVAIVVAQGVWTPLSAAATHANRSPGREVWGLVTQPVARLAHDDPSAIDKVQRRRLNAIMDLDWAAA GINPHRTDETFRTLREHPRPTAAQQLAALQVWAQLGLAHPTEYATAYAGVTRGWWDPRVNFAYPTDSDYLFTPGYLRQWA SFLTEGAWKHTSDGDADTVAAERLAAIEHDLAPLRGTSDKPQWQKNILRAIHRWARSDGRVGVRKGNLLTSMALYVTWIP LAAGLALVVRPARRRYGPALAAYGLLAFTVLSLYASPMALFWYPIPVFLALPLFVVLPFTFRESHPL >Mature_547_residues MNEGTAADVTAAHGGRSRQSKKHSKTYRSISAILSWLTARRPTTLSTSLRARFLPYLLTLAIAWLPWLILTWPGSMRDDT LAQYLQSSGLHHYYTQHPLFDTLTFGLFWHIGSALGSPLIGQALYTVTQAVLLAAGCALLLCYIRKIGSPRWLIGLGLVY LATNYVVVGAITTMGKDSLHAVFYLPLAVLFVEACLTRGSVLARRPVAFAFVILLFATIVSKRTALIIVLCAGCCLLAVC TPKGARRRAFACLAVAIVVAQGVWTPLSAAATHANRSPGREVWGLVTQPVARLAHDDPSAIDKVQRRRLNAIMDLDWAAA GINPHRTDETFRTLREHPRPTAAQQLAALQVWAQLGLAHPTEYATAYAGVTRGWWDPRVNFAYPTDSDYLFTPGYLRQWA SFLTEGAWKHTSDGDADTVAAERLAAIEHDLAPLRGTSDKPQWQKNILRAIHRWARSDGRVGVRKGNLLTSMALYVTWIP LAAGLALVVRPARRRYGPALAAYGLLAFTVLSLYASPMALFWYPIPVFLALPLFVVLPFTFRESHPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60258; Mature: 60258
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEGTAADVTAAHGGRSRQSKKHSKTYRSISAILSWLTARRPTTLSTSLRARFLPYLLTL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AIAWLPWLILTWPGSMRDDTLAQYLQSSGLHHYYTQHPLFDTLTFGLFWHIGSALGSPLI HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCHHH GQALYTVTQAVLLAAGCALLLCYIRKIGSPRWLIGLGLVYLATNYVVVGAITTMGKDSLH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEHHHHCCCHHHH AVFYLPLAVLFVEACLTRGSVLARRPVAFAFVILLFATIVSKRTALIIVLCAGCCLLAVC HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPKGARRRAFACLAVAIVVAQGVWTPLSAAATHANRSPGREVWGLVTQPVARLAHDDPSA CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHH IDKVQRRRLNAIMDLDWAAAGINPHRTDETFRTLREHPRPTAAQQLAALQVWAQLGLAHP HHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC TEYATAYAGVTRGWWDPRVNFAYPTDSDYLFTPGYLRQWASFLTEGAWKHTSDGDADTVA HHHHHHHHHCCCCCCCCCCEEECCCCCCCEECCHHHHHHHHHHHCCCCCCCCCCCHHHHH AERLAAIEHDLAPLRGTSDKPQWQKNILRAIHRWARSDGRVGVRKGNLLTSMALYVTWIP HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHH LAAGLALVVRPARRRYGPALAAYGLLAFTVLSLYASPMALFWYPIPVFLALPLFVVLPFT HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCHH FRESHPL HCCCCCC >Mature Secondary Structure MNEGTAADVTAAHGGRSRQSKKHSKTYRSISAILSWLTARRPTTLSTSLRARFLPYLLTL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AIAWLPWLILTWPGSMRDDTLAQYLQSSGLHHYYTQHPLFDTLTFGLFWHIGSALGSPLI HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCHHH GQALYTVTQAVLLAAGCALLLCYIRKIGSPRWLIGLGLVYLATNYVVVGAITTMGKDSLH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEHHHHCCCHHHH AVFYLPLAVLFVEACLTRGSVLARRPVAFAFVILLFATIVSKRTALIIVLCAGCCLLAVC HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPKGARRRAFACLAVAIVVAQGVWTPLSAAATHANRSPGREVWGLVTQPVARLAHDDPSA CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHH IDKVQRRRLNAIMDLDWAAAGINPHRTDETFRTLREHPRPTAAQQLAALQVWAQLGLAHP HHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC TEYATAYAGVTRGWWDPRVNFAYPTDSDYLFTPGYLRQWASFLTEGAWKHTSDGDADTVA HHHHHHHHHCCCCCCCCCCEEECCCCCCCEECCHHHHHHHHHHHCCCCCCCCCCCHHHHH AERLAAIEHDLAPLRGTSDKPQWQKNILRAIHRWARSDGRVGVRKGNLLTSMALYVTWIP HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHH LAAGLALVVRPARRRYGPALAAYGLLAFTVLSLYASPMALFWYPIPVFLALPLFVVLPFT HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCHH FRESHPL HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA