| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is ywbL [H]
Identifier: 213691117
GI number: 213691117
Start: 234435
End: 236363
Strand: Direct
Name: ywbL [H]
Synonym: Blon_0196
Alternate gene names: 213691117
Gene position: 234435-236363 (Clockwise)
Preceding gene: 213691116
Following gene: 213691118
Centisome position: 8.28
GC content: 62.31
Gene sequence:
>1929_bases ATGGTTCGTCGCGCCTGCGCGCAGTCCGCTGAAATGAACACGATGCGGGAACGTGATACGCGCGTTGCCGTTTCTCGCGT GCGCGCGAAGTCGGGCAGCACCGGTCGTCTGCAGTCGGCCACGGTCTCGGCTCGTGCATTTGCGGTCATCGTTTTTCTGT TTGCGATGATCGCCGCGACCTTCCTCCCCTCCGCCATCATTCCGCAGTCCGCGTTCGCCGTGACGCCGGCAACCACTGCC ACTGCTGCCACCGTCAAGAGCGACGACACCACCAGCGTCGATTACGCGACCTGGGCCGACGTTGCCAAGGCCGTCGAAGC GCAGTTGCAGGAAGGCCTTAAGGAATACAAGGACGGCAACCCAATGGGTGCCAAGTCCGATTTCGGGGCTGCATACACCA CCGTCTACGTGACGTCCAACTTCAACAAAGTGGTGAGCGACACCATCGGCGCAGACAAGCAGACCGCGCAGCAGCAGGCC TTCCAGGACCTGCAAAGCCAGGTGTTCACGTCAGACCAGGCCGATCAGCTTACCCAGAAGGTCAACGACCTGACCGCCGA CCTCGACGCCACGGCCCAGCAGCTCGACGCCAACACCAGCCTCGCCAACCCGAAGCAGTACTCCGAAGACCTCCAGAAGC AGATCGCCAAGGAGCGCAAGGAGCTCGACGCCAAGAAGAAGCGCACCGAGGAAACGGCCAAGACTTGGAAGGAAGTCGCG GATGCGATGCTTCCGATCCTGGACAACGCCTACAAGGCCTATGAGGGTGGCGACGCCGCCAAGGGCGCCACGCTCGTGAA CGACGCCTACTACCAGCACTACGAGAAGCTCGGCTTCGAGAAGACCGTGCTGAGCGCCATCAGCGGCAACCGCGTCTCCC AGGTGGAATACCAGTTCAAGCTGTGCCGCTCCTCGATGAACACCGGCAAGCCTGCTTCCGAAGTCAAGAAGTACATCGAC GACCTGAAGAACATGCTGGCCACCGATGCCGCCAAGCTCGACGGCGGCGCGGCCGATGAGGAGGGTGGCTTCCTCAAGTT CATCACCAGCTCGGTCGGTCAGGCGTTCCTGATTCTGATCCGCGAGGGTCTCGAGGCCCTGCTCGTGGTCGCCGCTGTGG TGGCCTACCTCGTCAAGTCCGGCAACAAGCGTTTCACCAAGTGGATCTACGTGGGCGTGCTCGCTGGTCTGGCCGGTGCC GGCATCGTGGCGGTCATCTTCATGCTCGCATTCGGCGGCTCCAGCCCGCTGCAGGAGATCATGGAAGGCGTGTGCGCGCT CGTCGCCATGTGCATGCTGTTGTGGACCAGCAACTGGATGCTCAACAAGTCCTCGGTGGAAGCGTGGAACCGCTACATCA GGGAAAAGACCGAAGCCGCGGTGGCCTCTGTCTCCTCGCAGGTCGAATCCGGCGAGAAGGTGGCTTCCCGCACGGTGATT TCGCTCGCCATGCTGAGCTTCCTCGCCGTGTTCCGTGAGGGCGCTGAAACCGTGATCTTCTACCAGTCGATCTACACGAT GAGCCAGGATACGCATGGCATGGTGGTCGGCGCACTCGCCGCCGCCGTGGTGCTCGTGATCATCTTCCTGGTGATTCGCT TTACCTCCGTGAAGATTCCGATTGGCCCGTTCTTCCTGGTCACCTCGATCCTCATGTCCGTACTGGTGGTTGTCTTCGCC GGCGGCGGCGTGCACGCGCTCATCGAGGGCGACCTGCTGCCCGCCAACTACCTGCCGGGCGTTCCCACCAACGACTGGCT CGGATTCTACCCGTACGTCGAATGCATCATCGCCCAGGTACTGGCAGCCATCGCCGTCATCGCGCTGTTCGTGGTCGGCT TTGCCAAACAGCGTAAGGCCAAGGCCCGGCTTGCGGCCGGTGCAAGCAAGTCGGACGCGAAGGCTGACGAGGAGAGCGCG CAGGCGTAG
Upstream 100 bases:
>100_bases CACCCGTCAAAAAATCAAGACTGTTGTTCAAGAATTTTTTTCTATAGAGTTCATAGTTGTTTTTGGACCATTCGAGTACT TGAAGTGAGAGGAATTCAGC
Downstream 100 bases:
>100_bases CACAACGCCCGGTGCGACCATCTCGCGCAACACAACTTGCGACATGGCAACGGAAGCGATTCCAGCCCACGCCGCCACAA CTAAAAACAGATAATAAATA
Product: iron permease FTR1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MVRRACAQSAEMNTMRERDTRVAVSRVRAKSGSTGRLQSATVSARAFAVIVFLFAMIAATFLPSAIIPQSAFAVTPATTA TAATVKSDDTTSVDYATWADVAKAVEAQLQEGLKEYKDGNPMGAKSDFGAAYTTVYVTSNFNKVVSDTIGADKQTAQQQA FQDLQSQVFTSDQADQLTQKVNDLTADLDATAQQLDANTSLANPKQYSEDLQKQIAKERKELDAKKKRTEETAKTWKEVA DAMLPILDNAYKAYEGGDAAKGATLVNDAYYQHYEKLGFEKTVLSAISGNRVSQVEYQFKLCRSSMNTGKPASEVKKYID DLKNMLATDAAKLDGGAADEEGGFLKFITSSVGQAFLILIREGLEALLVVAAVVAYLVKSGNKRFTKWIYVGVLAGLAGA GIVAVIFMLAFGGSSPLQEIMEGVCALVAMCMLLWTSNWMLNKSSVEAWNRYIREKTEAAVASVSSQVESGEKVASRTVI SLAMLSFLAVFREGAETVIFYQSIYTMSQDTHGMVVGALAAAVVLVIIFLVIRFTSVKIPIGPFFLVTSILMSVLVVVFA GGGVHALIEGDLLPANYLPGVPTNDWLGFYPYVECIIAQVLAAIAVIALFVVGFAKQRKAKARLAAGASKSDAKADEESA QA
Sequences:
>Translated_642_residues MVRRACAQSAEMNTMRERDTRVAVSRVRAKSGSTGRLQSATVSARAFAVIVFLFAMIAATFLPSAIIPQSAFAVTPATTA TAATVKSDDTTSVDYATWADVAKAVEAQLQEGLKEYKDGNPMGAKSDFGAAYTTVYVTSNFNKVVSDTIGADKQTAQQQA FQDLQSQVFTSDQADQLTQKVNDLTADLDATAQQLDANTSLANPKQYSEDLQKQIAKERKELDAKKKRTEETAKTWKEVA DAMLPILDNAYKAYEGGDAAKGATLVNDAYYQHYEKLGFEKTVLSAISGNRVSQVEYQFKLCRSSMNTGKPASEVKKYID DLKNMLATDAAKLDGGAADEEGGFLKFITSSVGQAFLILIREGLEALLVVAAVVAYLVKSGNKRFTKWIYVGVLAGLAGA GIVAVIFMLAFGGSSPLQEIMEGVCALVAMCMLLWTSNWMLNKSSVEAWNRYIREKTEAAVASVSSQVESGEKVASRTVI SLAMLSFLAVFREGAETVIFYQSIYTMSQDTHGMVVGALAAAVVLVIIFLVIRFTSVKIPIGPFFLVTSILMSVLVVVFA GGGVHALIEGDLLPANYLPGVPTNDWLGFYPYVECIIAQVLAAIAVIALFVVGFAKQRKAKARLAAGASKSDAKADEESA QA >Mature_642_residues MVRRACAQSAEMNTMRERDTRVAVSRVRAKSGSTGRLQSATVSARAFAVIVFLFAMIAATFLPSAIIPQSAFAVTPATTA TAATVKSDDTTSVDYATWADVAKAVEAQLQEGLKEYKDGNPMGAKSDFGAAYTTVYVTSNFNKVVSDTIGADKQTAQQQA FQDLQSQVFTSDQADQLTQKVNDLTADLDATAQQLDANTSLANPKQYSEDLQKQIAKERKELDAKKKRTEETAKTWKEVA DAMLPILDNAYKAYEGGDAAKGATLVNDAYYQHYEKLGFEKTVLSAISGNRVSQVEYQFKLCRSSMNTGKPASEVKKYID DLKNMLATDAAKLDGGAADEEGGFLKFITSSVGQAFLILIREGLEALLVVAAVVAYLVKSGNKRFTKWIYVGVLAGLAGA GIVAVIFMLAFGGSSPLQEIMEGVCALVAMCMLLWTSNWMLNKSSVEAWNRYIREKTEAAVASVSSQVESGEKVASRTVI SLAMLSFLAVFREGAETVIFYQSIYTMSQDTHGMVVGALAAAVVLVIIFLVIRFTSVKIPIGPFFLVTSILMSVLVVVFA GGGVHALIEGDLLPANYLPGVPTNDWLGFYPYVECIIAQVLAAIAVIALFVVGFAKQRKAKARLAAGASKSDAKADEESA QA
Specific function: Unknown
COG id: COG0672
COG function: function code P; High-affinity Fe2+/Pb2+ permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005217 - InterPro: IPR004923 [H]
Pfam domain/function: PF03239 FTR1 [H]
EC number: NA
Molecular weight: Translated: 69005; Mature: 69005
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRRACAQSAEMNTMRERDTRVAVSRVRAKSGSTGRLQSATVSARAFAVIVFLFAMIAAT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FLPSAIIPQSAFAVTPATTATAATVKSDDTTSVDYATWADVAKAVEAQLQEGLKEYKDGN HCCHHHCCCCCCEECCCCHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC PMGAKSDFGAAYTTVYVTSNFNKVVSDTIGADKQTAQQQAFQDLQSQVFTSDQADQLTQK CCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH VNDLTADLDATAQQLDANTSLANPKQYSEDLQKQIAKERKELDAKKKRTEETAKTWKEVA HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAMLPILDNAYKAYEGGDAAKGATLVNDAYYQHYEKLGFEKTVLSAISGNRVSQVEYQFK HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHH LCRSSMNTGKPASEVKKYIDDLKNMLATDAAKLDGGAADEEGGFLKFITSSVGQAFLILI HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH REGLEALLVVAAVVAYLVKSGNKRFTKWIYVGVLAGLAGAGIVAVIFMLAFGGSSPLQEI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH MEGVCALVAMCMLLWTSNWMLNKSSVEAWNRYIREKTEAAVASVSSQVESGEKVASRTVI HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLAMLSFLAVFREGAETVIFYQSIYTMSQDTHGMVVGALAAAVVLVIIFLVIRFTSVKIP HHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC IGPFFLVTSILMSVLVVVFAGGGVHALIEGDLLPANYLPGVPTNDWLGFYPYVECIIAQV CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LAAIAVIALFVVGFAKQRKAKARLAAGASKSDAKADEESAQA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC >Mature Secondary Structure MVRRACAQSAEMNTMRERDTRVAVSRVRAKSGSTGRLQSATVSARAFAVIVFLFAMIAAT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FLPSAIIPQSAFAVTPATTATAATVKSDDTTSVDYATWADVAKAVEAQLQEGLKEYKDGN HCCHHHCCCCCCEECCCCHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC PMGAKSDFGAAYTTVYVTSNFNKVVSDTIGADKQTAQQQAFQDLQSQVFTSDQADQLTQK CCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH VNDLTADLDATAQQLDANTSLANPKQYSEDLQKQIAKERKELDAKKKRTEETAKTWKEVA HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAMLPILDNAYKAYEGGDAAKGATLVNDAYYQHYEKLGFEKTVLSAISGNRVSQVEYQFK HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHH LCRSSMNTGKPASEVKKYIDDLKNMLATDAAKLDGGAADEEGGFLKFITSSVGQAFLILI HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH REGLEALLVVAAVVAYLVKSGNKRFTKWIYVGVLAGLAGAGIVAVIFMLAFGGSSPLQEI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH MEGVCALVAMCMLLWTSNWMLNKSSVEAWNRYIREKTEAAVASVSSQVESGEKVASRTVI HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLAMLSFLAVFREGAETVIFYQSIYTMSQDTHGMVVGALAAAVVLVIIFLVIRFTSVKIP HHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC IGPFFLVTSILMSVLVVVFAGGGVHALIEGDLLPANYLPGVPTNDWLGFYPYVECIIAQV CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LAAIAVIALFVVGFAKQRKAKARLAAGASKSDAKADEESAQA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]