| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691114
Identifier: 213691114
GI number: 213691114
Start: 229596
End: 230444
Strand: Reverse
Name: 213691114
Synonym: Blon_0193
Alternate gene names: NA
Gene position: 230444-229596 (Counterclockwise)
Preceding gene: 213691124
Following gene: 213691113
Centisome position: 8.13
GC content: 63.6
Gene sequence:
>849_bases ATGACATCACATCTTGCCGAAGCAGGACGCACGTTGGTTCCCCGCAAGGAAGACAGATACGGTCTGCTCTCCCCCGCCTT GGTGGTGCTGACGTTCGTCGCCGGGCTGGTGGACGCGCTGAGCTACCTGTCGCTGGGGCATGTGTTCGTGGCCAACGTGA CCGGCAACATCGTGTTTCTTGGGTTTTCGATCGCCCATGCCCAAGGCTTCGTCTGGTGGACGTCGGCGCTGACGCTCGTC TCCTTCATGGTCGGCGCGCTTATCGGCGGGCGCATCATCCGGCGATTCGAGGAGAACCGGGCCAAGCATCTGTTGGTTTC TACCTGCGTGCAGGCGTCGTTCGTACTCGCCGCGCTAATCGGTGTCTATCTTTTGAACCAGCTCATCACCGGCCCCGCAG ACGATGCGTCCGGCGTCTCCTCGATTGCACGGCTTGCACAGACCACCCAGGCCTCACAGGCCTCACAGCCGAGCCTGAAC TTCCCCACCGCACGGCACATCGACCTGCACATCATCCTGCTGATCGTGCTGCTCGCCCCGGCAATGGGCATCCAGAACTC CACCGCCCGCAAGCTGTCGGTGCCGGACCTGCCCACCACCGTGCTCACGATGACGCTGACCGGCGTCGTCGCAGACGCTT CGGCACACGGCCACCAGCAGTCGAAGCTCGGGCGGCGCGCGGTCGTAATGCTGGCGCTGGCGTCTGGCGCGCTGACCGGC GCGCTTCTGCAGGCGCACGGACACGAGAACATCATCTTGATGGTGATGCTCGGGTGTCTGCTGGCGGTCATCGCGATGAT GATTCCGCATGTCCATTCGGATGCGCCGTGGGTCACCGGTCGGCAATAG
Upstream 100 bases:
>100_bases GTTCACCGTCACCGTACGGGAGTAGGGAGTAGAGTGGCGGCGTCGACCGACGCATGTTCTCGCCATAATTTCAATCCCGA AAAGGAGCCTCGTCGCAACC
Downstream 100 bases:
>100_bases CCTCTGGCGCATACTTTCGCCATATGAGACAAAAACGGCCACGCCACAGCGCAACCAGTAGGAAACGCCCGGCAATCTCG GCTCTCCTCGATATGTTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTSHLAEAGRTLVPRKEDRYGLLSPALVVLTFVAGLVDALSYLSLGHVFVANVTGNIVFLGFSIAHAQGFVWWTSALTLV SFMVGALIGGRIIRRFEENRAKHLLVSTCVQASFVLAALIGVYLLNQLITGPADDASGVSSIARLAQTTQASQASQPSLN FPTARHIDLHIILLIVLLAPAMGIQNSTARKLSVPDLPTTVLTMTLTGVVADASAHGHQQSKLGRRAVVMLALASGALTG ALLQAHGHENIILMVMLGCLLAVIAMMIPHVHSDAPWVTGRQ
Sequences:
>Translated_282_residues MTSHLAEAGRTLVPRKEDRYGLLSPALVVLTFVAGLVDALSYLSLGHVFVANVTGNIVFLGFSIAHAQGFVWWTSALTLV SFMVGALIGGRIIRRFEENRAKHLLVSTCVQASFVLAALIGVYLLNQLITGPADDASGVSSIARLAQTTQASQASQPSLN FPTARHIDLHIILLIVLLAPAMGIQNSTARKLSVPDLPTTVLTMTLTGVVADASAHGHQQSKLGRRAVVMLALASGALTG ALLQAHGHENIILMVMLGCLLAVIAMMIPHVHSDAPWVTGRQ >Mature_281_residues TSHLAEAGRTLVPRKEDRYGLLSPALVVLTFVAGLVDALSYLSLGHVFVANVTGNIVFLGFSIAHAQGFVWWTSALTLVS FMVGALIGGRIIRRFEENRAKHLLVSTCVQASFVLAALIGVYLLNQLITGPADDASGVSSIARLAQTTQASQASQPSLNF PTARHIDLHIILLIVLLAPAMGIQNSTARKLSVPDLPTTVLTMTLTGVVADASAHGHQQSKLGRRAVVMLALASGALTGA LLQAHGHENIILMVMLGCLLAVIAMMIPHVHSDAPWVTGRQ
Specific function: Unknown
COG id: COG3619
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29857; Mature: 29725
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSHLAEAGRTLVPRKEDRYGLLSPALVVLTFVAGLVDALSYLSLGHVFVANVTGNIVFL CCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEE GFSIAHAQGFVWWTSALTLVSFMVGALIGGRIIRRFEENRAKHLLVSTCVQASFVLAALI EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVYLLNQLITGPADDASGVSSIARLAQTTQASQASQPSLNFPTARHIDLHIILLIVLLAP HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH AMGIQNSTARKLSVPDLPTTVLTMTLTGVVADASAHGHQQSKLGRRAVVMLALASGALTG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHH ALLQAHGHENIILMVMLGCLLAVIAMMIPHVHSDAPWVTGRQ HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TSHLAEAGRTLVPRKEDRYGLLSPALVVLTFVAGLVDALSYLSLGHVFVANVTGNIVFL CCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEE GFSIAHAQGFVWWTSALTLVSFMVGALIGGRIIRRFEENRAKHLLVSTCVQASFVLAALI EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVYLLNQLITGPADDASGVSSIARLAQTTQASQASQPSLNFPTARHIDLHIILLIVLLAP HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH AMGIQNSTARKLSVPDLPTTVLTMTLTGVVADASAHGHQQSKLGRRAVVMLALASGALTG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHH ALLQAHGHENIILMVMLGCLLAVIAMMIPHVHSDAPWVTGRQ HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA