| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691113
Identifier: 213691113
GI number: 213691113
Start: 228933
End: 229430
Strand: Reverse
Name: 213691113
Synonym: Blon_0192
Alternate gene names: NA
Gene position: 229430-228933 (Counterclockwise)
Preceding gene: 213691114
Following gene: 213691111
Centisome position: 8.1
GC content: 61.85
Gene sequence:
>498_bases ATGACTGACGCACAGCAGGCGAACGGCAACCAGTCCGAATCCCAGAACCAAGCAGAAGCGACGGCACAGCCGCACAACAA GCGAGTGACGAAGTGGGTCGCTATAGTGATTGCCATCGTGGCGGTGGCGATTATCGCCGCGGTCGCGGTGTTCGGCACCC GCGCATACAGCGCGTCTCAGTACGATAGCGCAGTGGCCGCCTGCGCCGCCGCCTCGGAAGACGTACGTAACGCCACCAAC GACTACAACAACTTGGTCAATGGCGATGCTGCAGAAGCCGCCGCTCTGACCAAGGCAGACGTCTCGGACGCCTCCGCTCT CGACGCGCTGTCCAAGGAACTGACCGTGGAACTGCCGACGTACGAAGGCTGCGTGGCCGACGATACCAAGGGCTACCAGG CCGCGGCCAAGAAACTCGAACAGCAGGTCACGTGGTACCACGAGCACACCACGTCGCTGCAGAAGGCTGTTGACGCCGTC AACGCGGTCAAGAAGTAA
Upstream 100 bases:
>100_bases CGCCCGGCAATCTCGGCTCTCCTCGATATGTTGGATACCCGTTGTTTGAAACAGGCCCTCCGCAAGATACAAACAGGGGC AGTGAGAAGGAGAGGTAAAT
Downstream 100 bases:
>100_bases GACGAGGGCGGTCTCCCTCACGTTTTCAGGATCGGACAGCGCTCAAGTCGCGGCAACGCGCGATGTCGGCCGGTCCTGCA CGGCCCGAAACGGCAGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTDAQQANGNQSESQNQAEATAQPHNKRVTKWVAIVIAIVAVAIIAAVAVFGTRAYSASQYDSAVAACAAASEDVRNATN DYNNLVNGDAAEAAALTKADVSDASALDALSKELTVELPTYEGCVADDTKGYQAAAKKLEQQVTWYHEHTTSLQKAVDAV NAVKK
Sequences:
>Translated_165_residues MTDAQQANGNQSESQNQAEATAQPHNKRVTKWVAIVIAIVAVAIIAAVAVFGTRAYSASQYDSAVAACAAASEDVRNATN DYNNLVNGDAAEAAALTKADVSDASALDALSKELTVELPTYEGCVADDTKGYQAAAKKLEQQVTWYHEHTTSLQKAVDAV NAVKK >Mature_164_residues TDAQQANGNQSESQNQAEATAQPHNKRVTKWVAIVIAIVAVAIIAAVAVFGTRAYSASQYDSAVAACAAASEDVRNATND YNNLVNGDAAEAAALTKADVSDASALDALSKELTVELPTYEGCVADDTKGYQAAAKKLEQQVTWYHEHTTSLQKAVDAVN AVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17344; Mature: 17213
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAQQANGNQSESQNQAEATAQPHNKRVTKWVAIVIAIVAVAIIAAVAVFGTRAYSASQ CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH YDSAVAACAAASEDVRNATNDYNNLVNGDAAEAAALTKADVSDASALDALSKELTVELPT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHEEECCC YEGCVADDTKGYQAAAKKLEQQVTWYHEHTTSLQKAVDAVNAVKK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDAQQANGNQSESQNQAEATAQPHNKRVTKWVAIVIAIVAVAIIAAVAVFGTRAYSASQ CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH YDSAVAACAAASEDVRNATNDYNNLVNGDAAEAAALTKADVSDASALDALSKELTVELPT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHEEECCC YEGCVADDTKGYQAAAKKLEQQVTWYHEHTTSLQKAVDAVNAVKK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA