| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691103
Identifier: 213691103
GI number: 213691103
Start: 217608
End: 217955
Strand: Reverse
Name: 213691103
Synonym: Blon_0182
Alternate gene names: NA
Gene position: 217955-217608 (Counterclockwise)
Preceding gene: 213691106
Following gene: 213691098
Centisome position: 7.69
GC content: 61.78
Gene sequence:
>348_bases ATGCCCGTTATTCACACTCATGTGTCCGTGTCCACCACCCCTGAGCAGCGCGAGGCGTTGAAGGCCGCCTATGGCAAGGC GATTACCGCCGTGCCGGGCAAGTCCGAGGGCTGGCTGATGTGCCCGTTCGAAGACAATATGCCGATCTACTTCGGTGGTA GCGATGACCAGCCCGCCGCCTATGTGGAGGTCAACGTGTTCGGCCGCTCCGTGCCGGGCTCTGCTTGGGAAAAGCTGACC GAGAGCATAATGGCCGCGCTGAACTCCACGCTCGGCATTCCCGAGGACCGCACCTACATCCGTTACACCGCCACCACCGA CTGGGGCTGGAATGGTGGCAACTTCTAG
Upstream 100 bases:
>100_bases TGCCCCGGTCCGTTCTGCGAGCAGCTTCCTACGTCCGCATGCCCTGTTCAACAGCAGCCGCTGAGGCTAGACTGGAAGCG AACCGAATCAAGGAGGAATT
Downstream 100 bases:
>100_bases TTTGTGTATTCTGGCTCCCCTCAGTCAGCTTCGCTGACAGCTCCCCTCAAAGAGGGAAGCTCAGATATAGAAAGCCCGCC GGTGGCGGGCTTTCTACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MPVIHTHVSVSTTPEQREALKAAYGKAITAVPGKSEGWLMCPFEDNMPIYFGGSDDQPAAYVEVNVFGRSVPGSAWEKLT ESIMAALNSTLGIPEDRTYIRYTATTDWGWNGGNF
Sequences:
>Translated_115_residues MPVIHTHVSVSTTPEQREALKAAYGKAITAVPGKSEGWLMCPFEDNMPIYFGGSDDQPAAYVEVNVFGRSVPGSAWEKLT ESIMAALNSTLGIPEDRTYIRYTATTDWGWNGGNF >Mature_114_residues PVIHTHVSVSTTPEQREALKAAYGKAITAVPGKSEGWLMCPFEDNMPIYFGGSDDQPAAYVEVNVFGRSVPGSAWEKLTE SIMAALNSTLGIPEDRTYIRYTATTDWGWNGGNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12574; Mature: 12443
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVIHTHVSVSTTPEQREALKAAYGKAITAVPGKSEGWLMCPFEDNMPIYFGGSDDQPAA CCEEEEEEEECCCHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCEEECCCCCCCEE YVEVNVFGRSVPGSAWEKLTESIMAALNSTLGIPEDRTYIRYTATTDWGWNGGNF EEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure PVIHTHVSVSTTPEQREALKAAYGKAITAVPGKSEGWLMCPFEDNMPIYFGGSDDQPAA CEEEEEEEECCCHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCEEECCCCCCCEE YVEVNVFGRSVPGSAWEKLTESIMAALNSTLGIPEDRTYIRYTATTDWGWNGGNF EEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA