| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691106
Identifier: 213691106
GI number: 213691106
Start: 220460
End: 221911
Strand: Reverse
Name: 213691106
Synonym: Blon_0185
Alternate gene names: NA
Gene position: 221911-220460 (Counterclockwise)
Preceding gene: 213691110
Following gene: 213691103
Centisome position: 7.83
GC content: 60.4
Gene sequence:
>1452_bases ATGTCCAATAACTCGTCCAACTCGAACTCGAGCACCATTCTGGCCGACATCAAGGAAGTAGGCCACAAAGTCTTTGGTGG GTATGCGGAACTACTGCGCATTCCGCATACCGCCCGTTATTCCATCGGCTCGGTCATCGCCTGCATGCCATTCCCGATGG TCGGCATGACCATCACCATTTCCGTACAGCATTATTACGGCAACTATTCGCTGGCCGGCATGCTCACCGCCATTCAGGCG ATTGCGTTGGCCGTGGCCACGCCGCTGCTAGGCAAGCTGACCGACAAGTTCGGCCAGAGACAGGTCTCGATTCCGACGAT CATCGTTTGGATTGTGGCCGCCATCGCGCTGGTGACGGCGATTACCAACCGCGCGCCGGAATGGGTGCTGTACTGTCTGA CGCCGTTCCTGGCCGCCATTCCGCCGTGGGGCGCGATGAGCCGCGCGCGCTGGACCAAGATTCTTAAGGGTGACCGGGAG CGCACGAACCGCGCGCTGTCGCTGTGCGGCGTGCTCGACGAATGCATGTGGGTAATCGGCAATCCGCTGGCCTCCACGCT GGCCGTGATCTCCGGTTTGCTGGCGTTCTCGTTCACTGGCATGTGCGTGGTGATCGGTGCGCTGATGTTCCTGACCGAGC TGACCACCGAGCCGCCATCACAGACCGCGCTGGCGCGCGCCGAGGGCATCTCCCGCAAGGAATACCGTGAGCGCGAGGCC GCCAAAGCTGAGGCGCTGAAGGTGGAAACCGCCGCCGAGGAGACCCGCCGCCGTCTTGAGCGTGAAGGCGTGACCGATGA GGCCACGATTAACGCAGCCATTAAGCAGGCGGTCGCCGATGCGCGTTCGGGCAAGAAGGCGTCCATTTGGGGTCCGGGTC TGATTGCGGTGTGCGTCACCTGGTTCGGTTTGGGCGCGTTCCAGTCGGCCACGGGCATCTCGATTATTGCGTTCGCCACC GAAGCGAATATGAAGCAGTACACGGGCTTTGTGTTTGCCTGCTTCTCCTTCAGCTCGCTGATGGGCGCATTGGTGTATGG CGCGAAGAACTGGTCGATTGCCCTGTGGAAGCGCTTCTACTTCTGCCTGGCCGTGGTGAACATCGGCATCAGTACGTTCC TGTTCGCCAAGCATCTGTGGGTAATCATGATCATCTACTTGATTATTGGCGTATGCCAGGCCCCGACGTGGATCAACGGC AACCAGCTCATGTTGCATCTGGTGCCGCCCTCTCGCTTGACCGAGGGCATGGCGTGGATGGGTGCGATGAACTCCATCGG CTCCTCCGCCGGTTCGGCGATTGCCGGCCAGTTCATTGACCGCATGGGCTCGCATGGCGGCTTCATGGTGGTGACCACTT TAGCACTGGCCTCGCTGGTGATTGCGCTGATTGGCTTCAAACAGATCAAGGGCTCCACCGAGCAGCCGACCTTGACTGAA GTGAGTGTGTGA
Upstream 100 bases:
>100_bases ACGCGACCATGAGCCCTGCATTGTGTGATGAGGGCTGCGCCGGCAACGCCACGCCAGCGGGGGACATCCAATCGGGAGCG GAAAGGAGCGTAGTGCTGTT
Downstream 100 bases:
>100_bases GACAAAAGCTAAGCCCCCTCTGGCGAGGGGGTCTGTCGAGCGAAGTGAGACTGGGGGAGAGATTACGTACGGAAATCTCT CCCCCAGTCTCACTTCGTTC
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: Facilitator Transporter; Facilitator Superfamily Protein; ABC Transporter Permease; ABC Transporter; ABC Transporter Permease Protein; Facilitator Superfamily Permease; ABC Transporter Integral Membrane Protein; Facilitator Superfamily Transporter Permease; MFS Family Transmembrane Protein; Transporter-Like Membrane Protein; Permease; Mfs Transporter; Efflux Protein; Arabinose Efflux Permease Family Protein; Permease Of Facilitator Superfamily; Facilitator Superfamily Transporter; Transporter Facilitator Family Protein; MFS-Family Transporter; ABC Transporter Membrane Spanning Protein; Transporter Transmembrane Subunit; MFS Superfamily Transporter
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MSNNSSNSNSSTILADIKEVGHKVFGGYAELLRIPHTARYSIGSVIACMPFPMVGMTITISVQHYYGNYSLAGMLTAIQA IALAVATPLLGKLTDKFGQRQVSIPTIIVWIVAAIALVTAITNRAPEWVLYCLTPFLAAIPPWGAMSRARWTKILKGDRE RTNRALSLCGVLDECMWVIGNPLASTLAVISGLLAFSFTGMCVVIGALMFLTELTTEPPSQTALARAEGISRKEYREREA AKAEALKVETAAEETRRRLEREGVTDEATINAAIKQAVADARSGKKASIWGPGLIAVCVTWFGLGAFQSATGISIIAFAT EANMKQYTGFVFACFSFSSLMGALVYGAKNWSIALWKRFYFCLAVVNIGISTFLFAKHLWVIMIIYLIIGVCQAPTWING NQLMLHLVPPSRLTEGMAWMGAMNSIGSSAGSAIAGQFIDRMGSHGGFMVVTTLALASLVIALIGFKQIKGSTEQPTLTE VSV
Sequences:
>Translated_483_residues MSNNSSNSNSSTILADIKEVGHKVFGGYAELLRIPHTARYSIGSVIACMPFPMVGMTITISVQHYYGNYSLAGMLTAIQA IALAVATPLLGKLTDKFGQRQVSIPTIIVWIVAAIALVTAITNRAPEWVLYCLTPFLAAIPPWGAMSRARWTKILKGDRE RTNRALSLCGVLDECMWVIGNPLASTLAVISGLLAFSFTGMCVVIGALMFLTELTTEPPSQTALARAEGISRKEYREREA AKAEALKVETAAEETRRRLEREGVTDEATINAAIKQAVADARSGKKASIWGPGLIAVCVTWFGLGAFQSATGISIIAFAT EANMKQYTGFVFACFSFSSLMGALVYGAKNWSIALWKRFYFCLAVVNIGISTFLFAKHLWVIMIIYLIIGVCQAPTWING NQLMLHLVPPSRLTEGMAWMGAMNSIGSSAGSAIAGQFIDRMGSHGGFMVVTTLALASLVIALIGFKQIKGSTEQPTLTE VSV >Mature_482_residues SNNSSNSNSSTILADIKEVGHKVFGGYAELLRIPHTARYSIGSVIACMPFPMVGMTITISVQHYYGNYSLAGMLTAIQAI ALAVATPLLGKLTDKFGQRQVSIPTIIVWIVAAIALVTAITNRAPEWVLYCLTPFLAAIPPWGAMSRARWTKILKGDRER TNRALSLCGVLDECMWVIGNPLASTLAVISGLLAFSFTGMCVVIGALMFLTELTTEPPSQTALARAEGISRKEYREREAA KAEALKVETAAEETRRRLEREGVTDEATINAAIKQAVADARSGKKASIWGPGLIAVCVTWFGLGAFQSATGISIIAFATE ANMKQYTGFVFACFSFSSLMGALVYGAKNWSIALWKRFYFCLAVVNIGISTFLFAKHLWVIMIIYLIIGVCQAPTWINGN QLMLHLVPPSRLTEGMAWMGAMNSIGSSAGSAIAGQFIDRMGSHGGFMVVTTLALASLVIALIGFKQIKGSTEQPTLTEV SV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52034; Mature: 51902
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNSSNSNSSTILADIKEVGHKVFGGYAELLRIPHTARYSIGSVIACMPFPMVGMTITI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEE SVQHYYGNYSLAGMLTAIQAIALAVATPLLGKLTDKFGQRQVSIPTIIVWIVAAIALVTA EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ITNRAPEWVLYCLTPFLAAIPPWGAMSRARWTKILKGDRERTNRALSLCGVLDECMWVIG HHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC NPLASTLAVISGLLAFSFTGMCVVIGALMFLTELTTEPPSQTALARAEGISRKEYREREA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHH AKAEALKVETAAEETRRRLEREGVTDEATINAAIKQAVADARSGKKASIWGPGLIAVCVT HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH WFGLGAFQSATGISIIAFATEANMKQYTGFVFACFSFSSLMGALVYGAKNWSIALWKRFY HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH FCLAVVNIGISTFLFAKHLWVIMIIYLIIGVCQAPTWINGNQLMLHLVPPSRLTEGMAWM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEECCHHHHHHHHHHH GAMNSIGSSAGSAIAGQFIDRMGSHGGFMVVTTLALASLVIALIGFKQIKGSTEQPTLTE HHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC VSV CCC >Mature Secondary Structure SNNSSNSNSSTILADIKEVGHKVFGGYAELLRIPHTARYSIGSVIACMPFPMVGMTITI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEE SVQHYYGNYSLAGMLTAIQAIALAVATPLLGKLTDKFGQRQVSIPTIIVWIVAAIALVTA EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ITNRAPEWVLYCLTPFLAAIPPWGAMSRARWTKILKGDRERTNRALSLCGVLDECMWVIG HHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC NPLASTLAVISGLLAFSFTGMCVVIGALMFLTELTTEPPSQTALARAEGISRKEYREREA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHH AKAEALKVETAAEETRRRLEREGVTDEATINAAIKQAVADARSGKKASIWGPGLIAVCVT HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH WFGLGAFQSATGISIIAFATEANMKQYTGFVFACFSFSSLMGALVYGAKNWSIALWKRFY HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH FCLAVVNIGISTFLFAKHLWVIMIIYLIIGVCQAPTWINGNQLMLHLVPPSRLTEGMAWM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEECCHHHHHHHHHHH GAMNSIGSSAGSAIAGQFIDRMGSHGGFMVVTTLALASLVIALIGFKQIKGSTEQPTLTE HHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC VSV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA