| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691089
Identifier: 213691089
GI number: 213691089
Start: 196685
End: 198265
Strand: Reverse
Name: 213691089
Synonym: Blon_0168
Alternate gene names: NA
Gene position: 198265-196685 (Counterclockwise)
Preceding gene: 213691090
Following gene: 213691087
Centisome position: 7.0
GC content: 63.69
Gene sequence:
>1581_bases ATGACGAGCTTGCGATTCCGCGAAGACGGCAGCTTCCGCGTGCTGCAAATGGCCGACGTACAGGACGGCCCCGATGTGTT GCCCGACACCATCCGCCTCATCCGCGAAGCCATCCGCGAAGCCGATCCGGATCTTGTGGTGTTCACCGGCGACCAGATCC GCGGCTATGATCCCGCCTACATCGACACGTTCCTGCGCCGCCGCGGCGAGGAGCCGGGCGCTCGCGTGCGCGCGGTCACC GAGATCGAGGCCAAAATCCGCGGGATCAAGCGTCACCCCGTAATTCGCAAAGTATCCGATCGCGTGGCCGATCGTCTCAC CGAAGCCGGCAAGCCTGTACCAGCCGCGCTGCTTGACCCCGATACCGTGACGAACGCCGTCGCCGCTGCCGGCGCCGATT CGACCGACGTGATCACGACTTCCGAAGTAGGCGATTCCGTTGAGACCAGCCCCACACCCGAGACGGTTTCCACCCTCGTA TATTCAACGCAATCCGGCAAGGCCAGCCCCGCACACGAGACGCCGGCGACCCTCGACGAACTCATGAATGAGACCCGCGA AAAGGTCCGCCGCACGTTCTCCGGTTTCCTTGGTCCGGTCGTCGAGGCCGGCGTGCCCTTTGCCGCCACCTACGGCAACC ACGACTTCCAATGCGGCATTCTGGCCGACGAACAGGATGACATCTACCGCGAATACCCCGGCTGCCTGAACCCCGACGAC AGTCTCGAGCCCGGCACGTTCGCGCTGCCCGTCGAGTCCTCCGATGGTTCCGGCCGCGTGGCCATGTCCGTTATGATGGT CAATTCAGGCGATTATGCCGGCAAACCCGAAGAAAACGACGCCCAATACCCGGCGTATGTGGTCAATCCGCGAGGACTCG ACCTGGCCGACGCCGACGGGTACGGCACCCCCACCCCCAAGGCCATCGAATGGCTGGGGTCCGTACAAACCGAGTTGGGC GAGCGCAATGGCGACGGCAAGCCCGTGCCGGCCATCGCCTTCCAGCACATTCCGCCGCAGGAATTCTACGATTGTCTGAA GGAAGTGCCCACATGGACGCCGAACGCCGTGGAAGGCGCGCGCACGCACGCCGGGCGTTGCTATGTGCTCAACCATGAGG TCTGCCGCCCCGGCTCGCGGCTCGGCGAGGCGATCGGCTGCGCGGACGAGAATGTGGGCGAGGTGGATGCCTTGCGCGAG GCTGGCGGCTATTTCGCGCTGTTCTGCGGGCATGACCATAAGAACTCTTTCGTTGGTCATGTGCATGATATCGATCTGGG CTATGCGCCCACGTGCGGGTTCGAATGCTATGGTCCCAAGTCGCGGTACCGCGGCATTCGCCTGTTTGAATTCCATGAGA GCAATCCGGCGGGCTATGTGACCCGCATGCTCACATGGGGTAATCTGGTCGGCCGCTACTCCAGCAACGAGCTGCGCGTC TGGTTCGAGGATCATTGCGTTACCGGAGCGGTCAGCGCACGCAACGAGCTGCGCCGCCCGCAGGTGTTCGCCGTGGTGGC CGGCGCGATGAGCCTTGGCTTTATAGCCATCATCCGTTCGCTGATCAAGGCCGCGCGCTAA
Upstream 100 bases:
>100_bases AACAACACGGCTGCGGCACCCCGCCCTGCCCCGTCCCTTGCTGTGCCAGTCCTGTGAACGCGCGGGCGATCCGCCGCCCG GCAACATAGACTGAAGAGCT
Downstream 100 bases:
>100_bases ACCTACTTAAACAGGCTCACCCCGCGACGGGCCGTGCAATACGCGTTGCCCAGCCAGGTATGGCGGGAATTGGGCCAGAC GGCTCCCAGTCGCGGTGCGT
Product: metallophosphoesterase
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Phosphohydrolase; Icc Family Phosphohydrolase; Phosphohydrolase Icc Family; Ser/Thr Phosphatase Family Protein; Ser/Thr Protein Phosphatase; Phosphoesterase
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MTSLRFREDGSFRVLQMADVQDGPDVLPDTIRLIREAIREADPDLVVFTGDQIRGYDPAYIDTFLRRRGEEPGARVRAVT EIEAKIRGIKRHPVIRKVSDRVADRLTEAGKPVPAALLDPDTVTNAVAAAGADSTDVITTSEVGDSVETSPTPETVSTLV YSTQSGKASPAHETPATLDELMNETREKVRRTFSGFLGPVVEAGVPFAATYGNHDFQCGILADEQDDIYREYPGCLNPDD SLEPGTFALPVESSDGSGRVAMSVMMVNSGDYAGKPEENDAQYPAYVVNPRGLDLADADGYGTPTPKAIEWLGSVQTELG ERNGDGKPVPAIAFQHIPPQEFYDCLKEVPTWTPNAVEGARTHAGRCYVLNHEVCRPGSRLGEAIGCADENVGEVDALRE AGGYFALFCGHDHKNSFVGHVHDIDLGYAPTCGFECYGPKSRYRGIRLFEFHESNPAGYVTRMLTWGNLVGRYSSNELRV WFEDHCVTGAVSARNELRRPQVFAVVAGAMSLGFIAIIRSLIKAAR
Sequences:
>Translated_526_residues MTSLRFREDGSFRVLQMADVQDGPDVLPDTIRLIREAIREADPDLVVFTGDQIRGYDPAYIDTFLRRRGEEPGARVRAVT EIEAKIRGIKRHPVIRKVSDRVADRLTEAGKPVPAALLDPDTVTNAVAAAGADSTDVITTSEVGDSVETSPTPETVSTLV YSTQSGKASPAHETPATLDELMNETREKVRRTFSGFLGPVVEAGVPFAATYGNHDFQCGILADEQDDIYREYPGCLNPDD SLEPGTFALPVESSDGSGRVAMSVMMVNSGDYAGKPEENDAQYPAYVVNPRGLDLADADGYGTPTPKAIEWLGSVQTELG ERNGDGKPVPAIAFQHIPPQEFYDCLKEVPTWTPNAVEGARTHAGRCYVLNHEVCRPGSRLGEAIGCADENVGEVDALRE AGGYFALFCGHDHKNSFVGHVHDIDLGYAPTCGFECYGPKSRYRGIRLFEFHESNPAGYVTRMLTWGNLVGRYSSNELRV WFEDHCVTGAVSARNELRRPQVFAVVAGAMSLGFIAIIRSLIKAAR >Mature_525_residues TSLRFREDGSFRVLQMADVQDGPDVLPDTIRLIREAIREADPDLVVFTGDQIRGYDPAYIDTFLRRRGEEPGARVRAVTE IEAKIRGIKRHPVIRKVSDRVADRLTEAGKPVPAALLDPDTVTNAVAAAGADSTDVITTSEVGDSVETSPTPETVSTLVY STQSGKASPAHETPATLDELMNETREKVRRTFSGFLGPVVEAGVPFAATYGNHDFQCGILADEQDDIYREYPGCLNPDDS LEPGTFALPVESSDGSGRVAMSVMMVNSGDYAGKPEENDAQYPAYVVNPRGLDLADADGYGTPTPKAIEWLGSVQTELGE RNGDGKPVPAIAFQHIPPQEFYDCLKEVPTWTPNAVEGARTHAGRCYVLNHEVCRPGSRLGEAIGCADENVGEVDALREA GGYFALFCGHDHKNSFVGHVHDIDLGYAPTCGFECYGPKSRYRGIRLFEFHESNPAGYVTRMLTWGNLVGRYSSNELRVW FEDHCVTGAVSARNELRRPQVFAVVAGAMSLGFIAIIRSLIKAAR
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57319; Mature: 57187
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLRFREDGSFRVLQMADVQDGPDVLPDTIRLIREAIREADPDLVVFTGDQIRGYDPAY CCCCEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHH IDTFLRRRGEEPGARVRAVTEIEAKIRGIKRHPVIRKVSDRVADRLTEAGKPVPAALLDP HHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCC DTVTNAVAAAGADSTDVITTSEVGDSVETSPTPETVSTLVYSTQSGKASPAHETPATLDE HHHHHHHHHCCCCCCCEEEEHHCCCCCCCCCCHHHHHHHEEECCCCCCCCCCCCHHHHHH LMNETREKVRRTFSGFLGPVVEAGVPFAATYGNHDFQCGILADEQDDIYREYPGCLNPDD HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCHHHHHHCCCCCCCCC SLEPGTFALPVESSDGSGRVAMSVMMVNSGDYAGKPEENDAQYPAYVVNPRGLDLADADG CCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC YGTPTPKAIEWLGSVQTELGERNGDGKPVPAIAFQHIPPQEFYDCLKEVPTWTPNAVEGA CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHEECCCCHHHHHHHHHHCCCCCCCCCCCC RTHAGRCYVLNHEVCRPGSRLGEAIGCADENVGEVDALREAGGYFALFCGHDHKNSFVGH CCCCCEEEEECCHHCCCHHHHHHHHCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCE VHDIDLGYAPTCGFECYGPKSRYRGIRLFEFHESNPAGYVTRMLTWGNLVGRYSSNELRV EEECCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEE WFEDHCVTGAVSARNELRRPQVFAVVAGAMSLGFIAIIRSLIKAAR EEECCCEECHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSLRFREDGSFRVLQMADVQDGPDVLPDTIRLIREAIREADPDLVVFTGDQIRGYDPAY CCCEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHH IDTFLRRRGEEPGARVRAVTEIEAKIRGIKRHPVIRKVSDRVADRLTEAGKPVPAALLDP HHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCC DTVTNAVAAAGADSTDVITTSEVGDSVETSPTPETVSTLVYSTQSGKASPAHETPATLDE HHHHHHHHHCCCCCCCEEEEHHCCCCCCCCCCHHHHHHHEEECCCCCCCCCCCCHHHHHH LMNETREKVRRTFSGFLGPVVEAGVPFAATYGNHDFQCGILADEQDDIYREYPGCLNPDD HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCHHHHHHCCCCCCCCC SLEPGTFALPVESSDGSGRVAMSVMMVNSGDYAGKPEENDAQYPAYVVNPRGLDLADADG CCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC YGTPTPKAIEWLGSVQTELGERNGDGKPVPAIAFQHIPPQEFYDCLKEVPTWTPNAVEGA CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHEECCCCHHHHHHHHHHCCCCCCCCCCCC RTHAGRCYVLNHEVCRPGSRLGEAIGCADENVGEVDALREAGGYFALFCGHDHKNSFVGH CCCCCEEEEECCHHCCCHHHHHHHHCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCE VHDIDLGYAPTCGFECYGPKSRYRGIRLFEFHESNPAGYVTRMLTWGNLVGRYSSNELRV EEECCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEE WFEDHCVTGAVSARNELRRPQVFAVVAGAMSLGFIAIIRSLIKAAR EEECCCEECHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA