| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691090
Identifier: 213691090
GI number: 213691090
Start: 198388
End: 198897
Strand: Reverse
Name: 213691090
Synonym: Blon_0169
Alternate gene names: NA
Gene position: 198897-198388 (Counterclockwise)
Preceding gene: 213691092
Following gene: 213691089
Centisome position: 7.02
GC content: 60.2
Gene sequence:
>510_bases GTGCCAGGGCGGCGCCGGGCCACGCGGATTTGTCAATACGCACGTAACATCCTACAGGCCGGTTCGGGCAAACCCGCGGG AAATGCCGTATCGTGGCATTTGCTTATGCACCTGGCTGATATGAGGGCACTCAGCGTCGGCGCCGGGCCACGCTTTGACT CCGGCACAACACCCCGCCTGCGATACCCCACCAGATGGCCCTCCATACGTCGGCGGCGGGCCAAATATTGGTACTGCACC GACAGCCAAACTGCTCAGCGTCGTCAGCGGACCAACTTATGGCGAAATACCGACTCTGGGAAAGCTTATCGTCGGCAAAT TGCCAGGCTATGGCACACTACCGACGCTACGAGGCCCACAACCATCGGCAACGCGACAAATATTGGCCCACCGCCGACGT TAGCCTCTTTGAGCGTCGGCGCCGGGCCATTCCATGAATCAGTAACGACGCCAATGGTCTCAGAACGTCAGCATAGGGAC GCTGTCTGGACCTCCACCGACGCTGCATGA
Upstream 100 bases:
>100_bases GCTACCGCTGCGAGATCAAAAACGGATGATTGATCCTGACCCATTGTTCCTCCTTTACTGGTTATTGCGCGGGCCCTCTT GCGGACGCGACTGCGGCGTT
Downstream 100 bases:
>100_bases CAAAATCGCGGCACCATCAAGCAACAACACGGCTGCGGCACCCCGCCCTGCCCCGTCCCTTGCTGTGCCAGTCCTGTGAA CGCGCGGGCGATCCGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MPGRRRATRICQYARNILQAGSGKPAGNAVSWHLLMHLADMRALSVGAGPRFDSGTTPRLRYPTRWPSIRRRRAKYWYCT DSQTAQRRQRTNLWRNTDSGKAYRRQIARLWHTTDATRPTTIGNATNIGPPPTLASLSVGAGPFHESVTTPMVSERQHRD AVWTSTDAA
Sequences:
>Translated_169_residues MPGRRRATRICQYARNILQAGSGKPAGNAVSWHLLMHLADMRALSVGAGPRFDSGTTPRLRYPTRWPSIRRRRAKYWYCT DSQTAQRRQRTNLWRNTDSGKAYRRQIARLWHTTDATRPTTIGNATNIGPPPTLASLSVGAGPFHESVTTPMVSERQHRD AVWTSTDAA >Mature_168_residues PGRRRATRICQYARNILQAGSGKPAGNAVSWHLLMHLADMRALSVGAGPRFDSGTTPRLRYPTRWPSIRRRRAKYWYCTD SQTAQRRQRTNLWRNTDSGKAYRRQIARLWHTTDATRPTTIGNATNIGPPPTLASLSVGAGPFHESVTTPMVSERQHRDA VWTSTDAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19013; Mature: 18881
Theoretical pI: Translated: 12.13; Mature: 12.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGRRRATRICQYARNILQAGSGKPAGNAVSWHLLMHLADMRALSVGAGPRFDSGTTPRL CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RYPTRWPSIRRRRAKYWYCTDSQTAQRRQRTNLWRNTDSGKAYRRQIARLWHTTDATRPT CCCCCCHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC TIGNATNIGPPPTLASLSVGAGPFHESVTTPMVSERQHRDAVWTSTDAA CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PGRRRATRICQYARNILQAGSGKPAGNAVSWHLLMHLADMRALSVGAGPRFDSGTTPRL CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RYPTRWPSIRRRRAKYWYCTDSQTAQRRQRTNLWRNTDSGKAYRRQIARLWHTTDATRPT CCCCCCHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC TIGNATNIGPPPTLASLSVGAGPFHESVTTPMVSERQHRDAVWTSTDAA CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA