| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is asd [H]
Identifier: 213691087
GI number: 213691087
Start: 194734
End: 195828
Strand: Reverse
Name: asd [H]
Synonym: Blon_0166
Alternate gene names: 213691087
Gene position: 195828-194734 (Counterclockwise)
Preceding gene: 213691089
Following gene: 213691083
Centisome position: 6.91
GC content: 60.55
Gene sequence:
>1095_bases ATGCCCGAAAAGATAAAGGTCGGCATCCTTGGTGCCACCGGTATGGTCGGTCAGCGTTTTATCACGCTGCTTGAGAATCA CCCGTGGTTCGAGGTGGTCACCCTTGCCGCTTCCGCGCACAGCGCCGGCAAGACGTATGCCGAGGCGGTCGGAGACCGTT GGAAGATGGAAACCCCGATGCCCGAATACGCCAAGCACATGGTGGTCGCGGACGGCGACGACGCCGAGTCCGTGGCCGCG AACGTGGACTTCATGTTCTCCGCGGTGAACATGCCGAAGGACCAGATTCGCGCCATTGAAGAGCGTTATGCCAAGACCGA GACCCCGGTGGTCTCCAACAACAGCGCCCACCGCTGGACCCCGGACGTGCCGATGGTGGTGCCGGAGATCAACCCGGAGC ACTTCGAGGTGATCGAGCACCAGCGCAAGCGCCTGGGCACTACTCGTGGTTTCATCGCCGTCAAGCCGAACTGCTCGATT CAGGCCTACACACCGGCACTGGCCGCGTGGAAGGAATTTGAACCGCGTGAGGTGGTTGTGAGCACCTATCAGGCGATTTC CGGCGCAGGCAAGACCTTCAAGGATTGGCCTGAGATGGTGGGCAACATCATCCCGTTCATCTCCGGTGAAGAAGCGAAGT CCGAGAAGGAACCGCTCAAGGTGTTCGGTCATGTGGACGCCGAGAAGGGCGAGATCGTGCCGTTCGACGGCGACCTCAAG ATCACTTCCCAGTGCATCCGCGTGCCCGTGCTCAACGGCCACACCGCCACCGTGTTCCTGAACTTCGGCAAGAAGGCCAC CAAGGAAGAGCTTATCGACCGTCTGGTGAACTACACGTCCAAGGCTTCCGAGCTGGAGCTGCCGCACGCACCAAAGCACT TCATCCAGTACCTCACCGAGGATGACCGCCCGCAGGTCAAGCTCGATGTGGATTACGAGGGTGGCATGGGCGTCTCCATC GGCCGTCTGCGCGAGGACTCCATCTTTGACTGGAAGTTCGTGGGTCTGGCCCACAACACTCTGCGCGGTGCAGCCGGCGG TGCCCTTGAATGCGCCGAAATGCTTAAGGCTCTCGGCTACATCACCAAGAAGTAG
Upstream 100 bases:
>100_bases GTTCTGCATGTTTCGTACAATTACCGTGTGTTTGCGGCCATTGCAAGACGGTCGCTTGAACGTATCAGCCCATCGAAACC CGAAGGTCATAGAGGTCATC
Downstream 100 bases:
>100_bases TTGAAACTCGTTAAAATCGCAAAAGCCCTCCGTGAGGAGGGCTTTCGTCGTATATACCGCAAAAACGCGGCTCAGTGGCT CAGCGGCCAGTACCGCCGTA
Product: aspartate-semialdehyde dehydrogenase
Products: NA
Alternate protein names: ASA dehydrogenase; ASADH [H]
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MPEKIKVGILGATGMVGQRFITLLENHPWFEVVTLAASAHSAGKTYAEAVGDRWKMETPMPEYAKHMVVADGDDAESVAA NVDFMFSAVNMPKDQIRAIEERYAKTETPVVSNNSAHRWTPDVPMVVPEINPEHFEVIEHQRKRLGTTRGFIAVKPNCSI QAYTPALAAWKEFEPREVVVSTYQAISGAGKTFKDWPEMVGNIIPFISGEEAKSEKEPLKVFGHVDAEKGEIVPFDGDLK ITSQCIRVPVLNGHTATVFLNFGKKATKEELIDRLVNYTSKASELELPHAPKHFIQYLTEDDRPQVKLDVDYEGGMGVSI GRLREDSIFDWKFVGLAHNTLRGAAGGALECAEMLKALGYITKK
Sequences:
>Translated_364_residues MPEKIKVGILGATGMVGQRFITLLENHPWFEVVTLAASAHSAGKTYAEAVGDRWKMETPMPEYAKHMVVADGDDAESVAA NVDFMFSAVNMPKDQIRAIEERYAKTETPVVSNNSAHRWTPDVPMVVPEINPEHFEVIEHQRKRLGTTRGFIAVKPNCSI QAYTPALAAWKEFEPREVVVSTYQAISGAGKTFKDWPEMVGNIIPFISGEEAKSEKEPLKVFGHVDAEKGEIVPFDGDLK ITSQCIRVPVLNGHTATVFLNFGKKATKEELIDRLVNYTSKASELELPHAPKHFIQYLTEDDRPQVKLDVDYEGGMGVSI GRLREDSIFDWKFVGLAHNTLRGAAGGALECAEMLKALGYITKK >Mature_363_residues PEKIKVGILGATGMVGQRFITLLENHPWFEVVTLAASAHSAGKTYAEAVGDRWKMETPMPEYAKHMVVADGDDAESVAAN VDFMFSAVNMPKDQIRAIEERYAKTETPVVSNNSAHRWTPDVPMVVPEINPEHFEVIEHQRKRLGTTRGFIAVKPNCSIQ AYTPALAAWKEFEPREVVVSTYQAISGAGKTFKDWPEMVGNIIPFISGEEAKSEKEPLKVFGHVDAEKGEIVPFDGDLKI TSQCIRVPVLNGHTATVFLNFGKKATKEELIDRLVNYTSKASELELPHAPKHFIQYLTEDDRPQVKLDVDYEGGMGVSIG RLREDSIFDWKFVGLAHNTLRGAAGGALECAEMLKALGYITKK
Specific function: Unknown
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320362, Length=372, Percent_Identity=38.7096774193548, Blast_Score=221, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000319 - InterPro: IPR005676 - InterPro: IPR012080 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.11 [H]
Molecular weight: Translated: 40373; Mature: 40241
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEKIKVGILGATGMVGQRFITLLENHPWFEVVTLAASAHSAGKTYAEAVGDRWKMETPM CCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEEEHHHHCCCCHHHHHHHCCCCCCCCCC PEYAKHMVVADGDDAESVAANVDFMFSAVNMPKDQIRAIEERYAKTETPVVSNNSAHRWT HHHHCEEEEECCCCHHHHHHCHHHEEEECCCCHHHHHHHHHHHHHCCCCEECCCCCCCCC PDVPMVVPEINPEHFEVIEHQRKRLGTTRGFIAVKPNCSIQAYTPALAAWKEFEPREVVV CCCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCHHHHHHCCCCHHHHH STYQAISGAGKTFKDWPEMVGNIIPFISGEEAKSEKEPLKVFGHVDAEKGEIVPFDGDLK HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCC ITSQCIRVPVLNGHTATVFLNFGKKATKEELIDRLVNYTSKASELELPHAPKHFIQYLTE EECCEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC DDRPQVKLDVDYEGGMGVSIGRLREDSIFDWKFVGLAHNTLRGAAGGALECAEMLKALGY CCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHH ITKK HCCC >Mature Secondary Structure PEKIKVGILGATGMVGQRFITLLENHPWFEVVTLAASAHSAGKTYAEAVGDRWKMETPM CCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEEEHHHHCCCCHHHHHHHCCCCCCCCCC PEYAKHMVVADGDDAESVAANVDFMFSAVNMPKDQIRAIEERYAKTETPVVSNNSAHRWT HHHHCEEEEECCCCHHHHHHCHHHEEEECCCCHHHHHHHHHHHHHCCCCEECCCCCCCCC PDVPMVVPEINPEHFEVIEHQRKRLGTTRGFIAVKPNCSIQAYTPALAAWKEFEPREVVV CCCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCHHHHHHCCCCHHHHH STYQAISGAGKTFKDWPEMVGNIIPFISGEEAKSEKEPLKVFGHVDAEKGEIVPFDGDLK HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCC ITSQCIRVPVLNGHTATVFLNFGKKATKEELIDRLVNYTSKASELELPHAPKHFIQYLTE EECCEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC DDRPQVKLDVDYEGGMGVSIGRLREDSIFDWKFVGLAHNTLRGAAGGALECAEMLKALGY CCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCHHHHHHHHHHHHH ITKK HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA