| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691042
Identifier: 213691042
GI number: 213691042
Start: 143069
End: 143695
Strand: Direct
Name: 213691042
Synonym: Blon_0121
Alternate gene names: NA
Gene position: 143069-143695 (Clockwise)
Preceding gene: 213691041
Following gene: 213691043
Centisome position: 5.05
GC content: 59.81
Gene sequence:
>627_bases ATGTGCCTGCGGCAGTTGTCCCTGCATAATTACCGCATGTTCTCCGACCTGTCGATCACCTTCCCGGATATGTCTGACGA TTGCGCCGATGGCGATTGCGAGGGCGCCGTCGAGGTAGAAGGCGATCGAGGCGCCGATGGCCGTGGCAATTGGGTGACGG TGATCGTCGGTGAAAACAGCTCGGGCAAAACGTCGATTCTCGATGCCGCCATCATTGCCTTGGGCACGTATCTGGTGAAG ATCCCCGACATCGACAAACCGACATTCAACCGTACGGATGCGCGGCTGGCCCGTATCGAAATGCACAATACGTTGACGGT GGATTACCAGCAGCAATTCCCGGTTTCGGTGAGCGCGCACGGCGATGTCATGGGGAATTCGTCGTCTTGGGCTCGTTCGC TGAAAAGCGCGAATGGTCCAAGTGGACCACGCATTCCACTGCTTATTTGCACACGCAGGATCGCCGGGCACATGACGGAG CGGTTCCCACTGTCCCGGATTCTGGGCCCCGACGACATGGACCGGCCGGTTGACGCCCATGTGGAGCACTATGTCCCTCG GCACCCCGGACCTTGGTATACCGGCAAGGGCAGGTCCTCCGCCGACGCGCTGTCGACAAGGTGCTGA
Upstream 100 bases:
>100_bases CATGTGATGAGATCAGGACATTGATGGATTGTTCGCCAGACGGATGGGGACTGCAATGAGCGCACCGGCGGAGGAAGATC GTATCATGAGGCCGGATGTA
Downstream 100 bases:
>100_bases AACTGAACGTCGAGCGGCTGCGGGCAAGGCGTGCCGGTGTGCAGCAGATGCTGTACGACATGCTTAAGGGTCTTTCCGAT GAGGAAACGGAGGAATTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MCLRQLSLHNYRMFSDLSITFPDMSDDCADGDCEGAVEVEGDRGADGRGNWVTVIVGENSSGKTSILDAAIIALGTYLVK IPDIDKPTFNRTDARLARIEMHNTLTVDYQQQFPVSVSAHGDVMGNSSSWARSLKSANGPSGPRIPLLICTRRIAGHMTE RFPLSRILGPDDMDRPVDAHVEHYVPRHPGPWYTGKGRSSADALSTRC
Sequences:
>Translated_208_residues MCLRQLSLHNYRMFSDLSITFPDMSDDCADGDCEGAVEVEGDRGADGRGNWVTVIVGENSSGKTSILDAAIIALGTYLVK IPDIDKPTFNRTDARLARIEMHNTLTVDYQQQFPVSVSAHGDVMGNSSSWARSLKSANGPSGPRIPLLICTRRIAGHMTE RFPLSRILGPDDMDRPVDAHVEHYVPRHPGPWYTGKGRSSADALSTRC >Mature_208_residues MCLRQLSLHNYRMFSDLSITFPDMSDDCADGDCEGAVEVEGDRGADGRGNWVTVIVGENSSGKTSILDAAIIALGTYLVK IPDIDKPTFNRTDARLARIEMHNTLTVDYQQQFPVSVSAHGDVMGNSSSWARSLKSANGPSGPRIPLLICTRRIAGHMTE RFPLSRILGPDDMDRPVDAHVEHYVPRHPGPWYTGKGRSSADALSTRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22788; Mature: 22788
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLRQLSLHNYRMFSDLSITFPDMSDDCADGDCEGAVEVEGDRGADGRGNWVTVIVGENS CCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCC SGKTSILDAAIIALGTYLVKIPDIDKPTFNRTDARLARIEMHNTLTVDYQQQFPVSVSAH CCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCEEEECC GDVMGNSSSWARSLKSANGPSGPRIPLLICTRRIAGHMTERFPLSRILGPDDMDRPVDAH CCCCCCCHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHCCHHHHCCCCCCCCCCHHH VEHYVPRHPGPWYTGKGRSSADALSTRC HHHCCCCCCCCCCCCCCCCCHHHHHCCC >Mature Secondary Structure MCLRQLSLHNYRMFSDLSITFPDMSDDCADGDCEGAVEVEGDRGADGRGNWVTVIVGENS CCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCC SGKTSILDAAIIALGTYLVKIPDIDKPTFNRTDARLARIEMHNTLTVDYQQQFPVSVSAH CCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCEEEECC GDVMGNSSSWARSLKSANGPSGPRIPLLICTRRIAGHMTERFPLSRILGPDDMDRPVDAH CCCCCCCHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHCCHHHHCCCCCCCCCCHHH VEHYVPRHPGPWYTGKGRSSADALSTRC HHHCCCCCCCCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA