| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691012
Identifier: 213691012
GI number: 213691012
Start: 109702
End: 110301
Strand: Direct
Name: 213691012
Synonym: Blon_0090
Alternate gene names: NA
Gene position: 109702-110301 (Clockwise)
Preceding gene: 213691011
Following gene: 213691015
Centisome position: 3.87
GC content: 63.67
Gene sequence:
>600_bases ATGAGCATGGAGAATATCGCGGGCGCTCGCAAGCCCGCCAAGCGTGAGGATGAGCACACGGTCGCCGGCGAGCATCGCAT GATGCGCCGTGCGGACCGCGAGGTGACCGATCCCGAGCGGATCGCCGCGATCATCGCCGCCTGCGACATCGTTGAAGTGG CCTATGCGGATGCCGAGGGCCTGACTATCGTGCCGCTGAATTTCGGCTTTGATTACGACGAGGCGACTGGCAAGCTGACG CTCTGGTTCCACTCCGCGCCGCGCGGCCGCAAGCTCGACGCGATTCGCGCCGCCGCCGGTGGCCGACTGCCCGTGGCTTT CACCATGCAGACCGACTGCGAGGTGGTGGCGGGCCGCACCACGTGCAATTGGGGTGAGGCGTTCAAGTCGATCGTCGGCA ATGGCACGGCGTCACTGGTCGAGGATCTGGATGAATGCCGCCACGGCTTGCAGACGCTGATGGCGCAGCAGGCGCATATG CCGAATGTGGAATTCACTGATGCACAGGTCCGCAGCGTCACGGTGTGGAAGATTGAGTCCGACTACTTCACCACCAAAGT CCGCACCAAACCCGTGCCCGCACACATGCATCAGCGTTAG
Upstream 100 bases:
>100_bases ACTGCATGAATTCCGCCGCGCTGCGTTTCGTGCCGCGCTCGCGTATGGTTGAGGAAGGCTACGGCGACTGGATTGCGGTT GTGGATGGGGATGATAAGGC
Downstream 100 bases:
>100_bases CCGGGGATAGCGCGCCACCTCCCCACTGGCGGGAGGCAGCGCGCAGCGCCGGTGGATGGCCCACGTCCGGACCCGATAGA CTTGCCGCCATGGCAGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Nitroimidazole Resistance Protein; Antibiotic Resistance Protein; 5-Nitroimidazole Antibiotic Resistance
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSMENIAGARKPAKREDEHTVAGEHRMMRRADREVTDPERIAAIIAACDIVEVAYADAEGLTIVPLNFGFDYDEATGKLT LWFHSAPRGRKLDAIRAAAGGRLPVAFTMQTDCEVVAGRTTCNWGEAFKSIVGNGTASLVEDLDECRHGLQTLMAQQAHM PNVEFTDAQVRSVTVWKIESDYFTTKVRTKPVPAHMHQR
Sequences:
>Translated_199_residues MSMENIAGARKPAKREDEHTVAGEHRMMRRADREVTDPERIAAIIAACDIVEVAYADAEGLTIVPLNFGFDYDEATGKLT LWFHSAPRGRKLDAIRAAAGGRLPVAFTMQTDCEVVAGRTTCNWGEAFKSIVGNGTASLVEDLDECRHGLQTLMAQQAHM PNVEFTDAQVRSVTVWKIESDYFTTKVRTKPVPAHMHQR >Mature_198_residues SMENIAGARKPAKREDEHTVAGEHRMMRRADREVTDPERIAAIIAACDIVEVAYADAEGLTIVPLNFGFDYDEATGKLTL WFHSAPRGRKLDAIRAAAGGRLPVAFTMQTDCEVVAGRTTCNWGEAFKSIVGNGTASLVEDLDECRHGLQTLMAQQAHMP NVEFTDAQVRSVTVWKIESDYFTTKVRTKPVPAHMHQR
Specific function: Unknown
COG id: COG3467
COG function: function code R; Predicted flavin-nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22058; Mature: 21927
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMENIAGARKPAKREDEHTVAGEHRMMRRADREVTDPERIAAIIAACDIVEVAYADAEG CCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC LTIVPLNFGFDYDEATGKLTLWFHSAPRGRKLDAIRAAAGGRLPVAFTMQTDCEVVAGRT CEEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCCEEEECCC TCNWGEAFKSIVGNGTASLVEDLDECRHGLQTLMAQQAHMPNVEFTDAQVRSVTVWKIES CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEEEEEEEEC DYFTTKVRTKPVPAHMHQR CEEEEEEECCCCCCCCCCC >Mature Secondary Structure SMENIAGARKPAKREDEHTVAGEHRMMRRADREVTDPERIAAIIAACDIVEVAYADAEG CCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC LTIVPLNFGFDYDEATGKLTLWFHSAPRGRKLDAIRAAAGGRLPVAFTMQTDCEVVAGRT CEEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEECCCCEEEECCC TCNWGEAFKSIVGNGTASLVEDLDECRHGLQTLMAQQAHMPNVEFTDAQVRSVTVWKIES CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEEEEEEEEC DYFTTKVRTKPVPAHMHQR CEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA