| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yddG [H]
Identifier: 213691008
GI number: 213691008
Start: 103016
End: 103972
Strand: Direct
Name: yddG [H]
Synonym: Blon_0086
Alternate gene names: 213691008
Gene position: 103016-103972 (Clockwise)
Preceding gene: 213691007
Following gene: 213691009
Centisome position: 3.64
GC content: 69.28
Gene sequence:
>957_bases ATGGCGAACGGCGTACGGCACACGAAAGGCGCACCGGCACCGCAGACCGGCTGGCGAGGCGGGCACGTCGTATCCGCGCG CGCCACGACCATCGGTCTGATGGCCATCCTGTTGTGGAGCGTCATGGCCGCCGCCGTGCGCATCGTCGCCGAGGATTTCG GCGCCACGCTCGGCTCGGCGCTCATCTACACGGTGGGCGGCATCCTGCTGCTGGTGTTCCGGCGGCCTGCGCCGATCCGA GAGTTCCCACGGCGATACCTGATCGTCGGCGGCCTGCTGTTCGTCTTCTACGAATCGTCGATATCCCTGTCGCTGGGCCT GGCCCCCACCGCCGAAGCCTCGGTGGAGGTGAGTCTGGTCAACTACCTGTGGCCCACGATGATGGTGCTGATGTCGGCCG CCATATCCCATCGTCGGCACGCGGTCCGCGCCGTGCTGCCGGGGGCGGTCGTGGCCACGGCCGGCGTGATGCTGGCGGTC GGCGGCAATTCCGGGCTTGACTGGCAGGCCGCCGTGCGGCACATCGCCGCCGACCCCCTGCCGTACGCGCTGGCGTTCGC GGGGGCGCTCGCATGGTCGGTGTATGCGGTGTTCACGCCCGCCATGAGTCATGGCGTGGACGGCACCTCGCTGTTCTTTC CGTGGGTGGCCGTGGCGTTGTGGATCATCCACGCCGCATCCGGTCAGGGATGGCCGTCCACGCCGCCGCGCCCGTCCGCC TGGCTGTTCGTGGTGATCGCCGCGGTGGCGATCGGCGGCGGCTACGCCTGTTGGGGCTATGGCATTCTGCATGGTTCGAT GGAACGGCTGGCCATCGCCTCATACGCCACGCCGGTGCTGTCCACCGGGGCCAGCGCGGTGCTGCTGGGCCTGTCGTTGT CGCTGCCGTTCTGGTGCGGCGCGCTGCTGGTGGCCGCCGGCTCGGTGCTCAACTATCTGGTCAGCGCACGCGAATAA
Upstream 100 bases:
>100_bases TCTACGACGATCCGACGATCGCCAGCGCCACGTACTGAGCGCCGCTGTACCCATCCGATGGGTAGAGTGGCTTGCGGAAC AAGGCGAGAGAGGCGGACCC
Downstream 100 bases:
>100_bases CCCGGGGCTGGGCATACCGGGCGTATCGCCCGTGGGACGCTGGGCGAAGCCTGTGGAAATCATGAAAACTCGTGGCAGGT TCCGTGAAACTCGTCGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MANGVRHTKGAPAPQTGWRGGHVVSARATTIGLMAILLWSVMAAAVRIVAEDFGATLGSALIYTVGGILLLVFRRPAPIR EFPRRYLIVGGLLFVFYESSISLSLGLAPTAEASVEVSLVNYLWPTMMVLMSAAISHRRHAVRAVLPGAVVATAGVMLAV GGNSGLDWQAAVRHIAADPLPYALAFAGALAWSVYAVFTPAMSHGVDGTSLFFPWVAVALWIIHAASGQGWPSTPPRPSA WLFVVIAAVAIGGGYACWGYGILHGSMERLAIASYATPVLSTGASAVLLGLSLSLPFWCGALLVAAGSVLNYLVSARE
Sequences:
>Translated_318_residues MANGVRHTKGAPAPQTGWRGGHVVSARATTIGLMAILLWSVMAAAVRIVAEDFGATLGSALIYTVGGILLLVFRRPAPIR EFPRRYLIVGGLLFVFYESSISLSLGLAPTAEASVEVSLVNYLWPTMMVLMSAAISHRRHAVRAVLPGAVVATAGVMLAV GGNSGLDWQAAVRHIAADPLPYALAFAGALAWSVYAVFTPAMSHGVDGTSLFFPWVAVALWIIHAASGQGWPSTPPRPSA WLFVVIAAVAIGGGYACWGYGILHGSMERLAIASYATPVLSTGASAVLLGLSLSLPFWCGALLVAAGSVLNYLVSARE >Mature_317_residues ANGVRHTKGAPAPQTGWRGGHVVSARATTIGLMAILLWSVMAAAVRIVAEDFGATLGSALIYTVGGILLLVFRRPAPIRE FPRRYLIVGGLLFVFYESSISLSLGLAPTAEASVEVSLVNYLWPTMMVLMSAAISHRRHAVRAVLPGAVVATAGVMLAVG GNSGLDWQAAVRHIAADPLPYALAFAGALAWSVYAVFTPAMSHGVDGTSLFFPWVAVALWIIHAASGQGWPSTPPRPSAW LFVVIAAVAIGGGYACWGYGILHGSMERLAIASYATPVLSTGASAVLLGLSLSLPFWCGALLVAAGSVLNYLVSARE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DUF6 domain [H]
Homologues:
Organism=Escherichia coli, GI145693132, Length=292, Percent_Identity=40.0684931506849, Blast_Score=197, Evalue=7e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33192; Mature: 33061
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANGVRHTKGAPAPQTGWRGGHVVSARATTIGLMAILLWSVMAAAVRIVAEDFGATLGSA CCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIYTVGGILLLVFRRPAPIREFPRRYLIVGGLLFVFYESSISLSLGLAPTAEASVEVSLV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEHHHH NYLWPTMMVLMSAAISHRRHAVRAVLPGAVVATAGVMLAVGGNSGLDWQAAVRHIAADPL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCC PYALAFAGALAWSVYAVFTPAMSHGVDGTSLFFPWVAVALWIIHAASGQGWPSTPPRPSA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH WLFVVIAAVAIGGGYACWGYGILHGSMERLAIASYATPVLSTGASAVLLGLSLSLPFWCG HHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHH ALLVAAGSVLNYLVSARE HHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANGVRHTKGAPAPQTGWRGGHVVSARATTIGLMAILLWSVMAAAVRIVAEDFGATLGSA CCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIYTVGGILLLVFRRPAPIREFPRRYLIVGGLLFVFYESSISLSLGLAPTAEASVEVSLV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEHHHH NYLWPTMMVLMSAAISHRRHAVRAVLPGAVVATAGVMLAVGGNSGLDWQAAVRHIAADPL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCC PYALAFAGALAWSVYAVFTPAMSHGVDGTSLFFPWVAVALWIIHAASGQGWPSTPPRPSA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH WLFVVIAAVAIGGGYACWGYGILHGSMERLAIASYATPVLSTGASAVLLGLSLSLPFWCG HHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHH ALLVAAGSVLNYLVSARE HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 1834669; 7567469 [H]