Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is yddG [H]

Identifier: 213691008

GI number: 213691008

Start: 103016

End: 103972

Strand: Direct

Name: yddG [H]

Synonym: Blon_0086

Alternate gene names: 213691008

Gene position: 103016-103972 (Clockwise)

Preceding gene: 213691007

Following gene: 213691009

Centisome position: 3.64

GC content: 69.28

Gene sequence:

>957_bases
ATGGCGAACGGCGTACGGCACACGAAAGGCGCACCGGCACCGCAGACCGGCTGGCGAGGCGGGCACGTCGTATCCGCGCG
CGCCACGACCATCGGTCTGATGGCCATCCTGTTGTGGAGCGTCATGGCCGCCGCCGTGCGCATCGTCGCCGAGGATTTCG
GCGCCACGCTCGGCTCGGCGCTCATCTACACGGTGGGCGGCATCCTGCTGCTGGTGTTCCGGCGGCCTGCGCCGATCCGA
GAGTTCCCACGGCGATACCTGATCGTCGGCGGCCTGCTGTTCGTCTTCTACGAATCGTCGATATCCCTGTCGCTGGGCCT
GGCCCCCACCGCCGAAGCCTCGGTGGAGGTGAGTCTGGTCAACTACCTGTGGCCCACGATGATGGTGCTGATGTCGGCCG
CCATATCCCATCGTCGGCACGCGGTCCGCGCCGTGCTGCCGGGGGCGGTCGTGGCCACGGCCGGCGTGATGCTGGCGGTC
GGCGGCAATTCCGGGCTTGACTGGCAGGCCGCCGTGCGGCACATCGCCGCCGACCCCCTGCCGTACGCGCTGGCGTTCGC
GGGGGCGCTCGCATGGTCGGTGTATGCGGTGTTCACGCCCGCCATGAGTCATGGCGTGGACGGCACCTCGCTGTTCTTTC
CGTGGGTGGCCGTGGCGTTGTGGATCATCCACGCCGCATCCGGTCAGGGATGGCCGTCCACGCCGCCGCGCCCGTCCGCC
TGGCTGTTCGTGGTGATCGCCGCGGTGGCGATCGGCGGCGGCTACGCCTGTTGGGGCTATGGCATTCTGCATGGTTCGAT
GGAACGGCTGGCCATCGCCTCATACGCCACGCCGGTGCTGTCCACCGGGGCCAGCGCGGTGCTGCTGGGCCTGTCGTTGT
CGCTGCCGTTCTGGTGCGGCGCGCTGCTGGTGGCCGCCGGCTCGGTGCTCAACTATCTGGTCAGCGCACGCGAATAA

Upstream 100 bases:

>100_bases
TCTACGACGATCCGACGATCGCCAGCGCCACGTACTGAGCGCCGCTGTACCCATCCGATGGGTAGAGTGGCTTGCGGAAC
AAGGCGAGAGAGGCGGACCC

Downstream 100 bases:

>100_bases
CCCGGGGCTGGGCATACCGGGCGTATCGCCCGTGGGACGCTGGGCGAAGCCTGTGGAAATCATGAAAACTCGTGGCAGGT
TCCGTGAAACTCGTCGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MANGVRHTKGAPAPQTGWRGGHVVSARATTIGLMAILLWSVMAAAVRIVAEDFGATLGSALIYTVGGILLLVFRRPAPIR
EFPRRYLIVGGLLFVFYESSISLSLGLAPTAEASVEVSLVNYLWPTMMVLMSAAISHRRHAVRAVLPGAVVATAGVMLAV
GGNSGLDWQAAVRHIAADPLPYALAFAGALAWSVYAVFTPAMSHGVDGTSLFFPWVAVALWIIHAASGQGWPSTPPRPSA
WLFVVIAAVAIGGGYACWGYGILHGSMERLAIASYATPVLSTGASAVLLGLSLSLPFWCGALLVAAGSVLNYLVSARE

Sequences:

>Translated_318_residues
MANGVRHTKGAPAPQTGWRGGHVVSARATTIGLMAILLWSVMAAAVRIVAEDFGATLGSALIYTVGGILLLVFRRPAPIR
EFPRRYLIVGGLLFVFYESSISLSLGLAPTAEASVEVSLVNYLWPTMMVLMSAAISHRRHAVRAVLPGAVVATAGVMLAV
GGNSGLDWQAAVRHIAADPLPYALAFAGALAWSVYAVFTPAMSHGVDGTSLFFPWVAVALWIIHAASGQGWPSTPPRPSA
WLFVVIAAVAIGGGYACWGYGILHGSMERLAIASYATPVLSTGASAVLLGLSLSLPFWCGALLVAAGSVLNYLVSARE
>Mature_317_residues
ANGVRHTKGAPAPQTGWRGGHVVSARATTIGLMAILLWSVMAAAVRIVAEDFGATLGSALIYTVGGILLLVFRRPAPIRE
FPRRYLIVGGLLFVFYESSISLSLGLAPTAEASVEVSLVNYLWPTMMVLMSAAISHRRHAVRAVLPGAVVATAGVMLAVG
GNSGLDWQAAVRHIAADPLPYALAFAGALAWSVYAVFTPAMSHGVDGTSLFFPWVAVALWIIHAASGQGWPSTPPRPSAW
LFVVIAAVAIGGGYACWGYGILHGSMERLAIASYATPVLSTGASAVLLGLSLSLPFWCGALLVAAGSVLNYLVSARE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI145693132, Length=292, Percent_Identity=40.0684931506849, Blast_Score=197, Evalue=7e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33192; Mature: 33061

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANGVRHTKGAPAPQTGWRGGHVVSARATTIGLMAILLWSVMAAAVRIVAEDFGATLGSA
CCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIYTVGGILLLVFRRPAPIREFPRRYLIVGGLLFVFYESSISLSLGLAPTAEASVEVSLV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEHHHH
NYLWPTMMVLMSAAISHRRHAVRAVLPGAVVATAGVMLAVGGNSGLDWQAAVRHIAADPL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCC
PYALAFAGALAWSVYAVFTPAMSHGVDGTSLFFPWVAVALWIIHAASGQGWPSTPPRPSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
WLFVVIAAVAIGGGYACWGYGILHGSMERLAIASYATPVLSTGASAVLLGLSLSLPFWCG
HHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHH
ALLVAAGSVLNYLVSARE
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANGVRHTKGAPAPQTGWRGGHVVSARATTIGLMAILLWSVMAAAVRIVAEDFGATLGSA
CCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIYTVGGILLLVFRRPAPIREFPRRYLIVGGLLFVFYESSISLSLGLAPTAEASVEVSLV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEHHHH
NYLWPTMMVLMSAAISHRRHAVRAVLPGAVVATAGVMLAVGGNSGLDWQAAVRHIAADPL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCC
PYALAFAGALAWSVYAVFTPAMSHGVDGTSLFFPWVAVALWIIHAASGQGWPSTPPRPSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
WLFVVIAAVAIGGGYACWGYGILHGSMERLAIASYATPVLSTGASAVLLGLSLSLPFWCG
HHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHH
ALLVAAGSVLNYLVSARE
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1834669; 7567469 [H]