| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691009
Identifier: 213691009
GI number: 213691009
Start: 104138
End: 105514
Strand: Direct
Name: 213691009
Synonym: Blon_0087
Alternate gene names: NA
Gene position: 104138-105514 (Clockwise)
Preceding gene: 213691008
Following gene: 213691010
Centisome position: 3.68
GC content: 67.9
Gene sequence:
>1377_bases ATGGAAGACTCCGTTTGGAAGACGGTCATGGGATTGTCGCTGGTCCGGGGGATCGTGCCCCGGACCTTGTTCGGACTGAC CGTGGTCGCGGCGATCATACTGATCGGCATACTGGCATTCGGCGGCAGACGACACCGCACGCATCCGCTGGTCGCCTCAC TGGTTGCCGCCACGCTCGCCGGCGCGGGCGGACTACTGGCCACGTGGCTGATGTCCGACGTGTTCATGGTGTTCGGCGTA TCGCTGGGTTGGCCGGTGACCCTCACCGTCGCGGGAGGCTTCGCGGGCCTCGGCTTCGTGCTAGCCGCCGCCGTGACGTT ACGGGGAGCCCGTCGCGCGCTGGCCGTCGTGCTGGTGCCGCTGGTGCTGGCGTCCACCGCGCTCGGCGTGGACTCGATCT ACGGCGAATACCGGACCATCGGCAATCTCGTCGGCTATACGCCGTACCCCCCGCTCGGTTCGGTCACCGTGCGCAAAGCC TCGATGAGCGTCGGCGAGTGGCGCGACAAGGCGCGCAAGGACGCTCTGCCATCCATGCCCGACTCGGGCAGGGTGTTCGC CGTCGACATCCCGAACACCGAATCCAAGTTCAAGGCGCGCAAGGCGATGGTCTACCTGCCGCCCGCCGCGCTGTCCGACC GCCCGCCGGCCCTGCCGGTGATGGAGCTGCTCGCCGGTCAGCCGGGCAGTCCCGGTCGCCTCATCGACGCCGGCAACATC GCCGCCACGATGAACGCTTACGCCGCCGAACACGACGGGCTGGCGCCGATCGTGCTCGCACCCGACCAGAACGGTTCGGC CATGCACAACAGCCTGTGCGCCGACACTACCCGAGGCAACGCCGAAACCTACCTCACCAAAGACGTGGTGAACTGGGCCA CAACGACGCTGCCGGTAGCCAAGTCGGCCCGTATGTGGGCGATGGGCGGGTTCTCGCAAGGCGGCACCTGCACCACGCAG CTGGTGCCGCGTCACCCTGACATCTACGGTGCGATGCTGCCGGTGGATGGTGAGCTCGAGCCGACCGACGGCAGCGTCGA GACGATGGTCCGGCGATATTTCGCCGGCGACCGCAAGGCCTACAACAGGCAGGTGCCGGTCAACGCCATCGCCGCCACCG GCACGGCCGGCCAGGCGCTGTTCGCCGGCGCCGGCAAGGGGGATCGGAAGTCGGTCGCCAACATGCGCACCATCGCCGCG GCCGCGCGCGCGGCCGGCATGGAGACCACTGAACTGGTCGTGCCCGGCGCCGACCATGACTGGCATGCGGTGCAGGCGGT CTGGAACCCCGGTCTCGACTGGTTCGGCGCGCGAACCGGGCTGGGCGAAATGACGAAATCGTTGGAGGAATACCCACAAG TGGAGGTGTTGCAATGA
Upstream 100 bases:
>100_bases AAACTCGTGGCAGGTTCCGTGAAACTCGTCGATGCTCCATGAATCACGGGTTAGTGTGGCGTGAGCCTGCAAGTGATGGC CTGAAGCGCGAAGGTGAGGA
Downstream 100 bases:
>100_bases GCGAAGAACAACAGCATGGGAACGCGCGGCCGGCGGCCATGCCGCAGACGCGGCGGCCTCTGCGGGACGCGGAACCCTCG CGGACGAAGCCCACCACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MEDSVWKTVMGLSLVRGIVPRTLFGLTVVAAIILIGILAFGGRRHRTHPLVASLVAATLAGAGGLLATWLMSDVFMVFGV SLGWPVTLTVAGGFAGLGFVLAAAVTLRGARRALAVVLVPLVLASTALGVDSIYGEYRTIGNLVGYTPYPPLGSVTVRKA SMSVGEWRDKARKDALPSMPDSGRVFAVDIPNTESKFKARKAMVYLPPAALSDRPPALPVMELLAGQPGSPGRLIDAGNI AATMNAYAAEHDGLAPIVLAPDQNGSAMHNSLCADTTRGNAETYLTKDVVNWATTTLPVAKSARMWAMGGFSQGGTCTTQ LVPRHPDIYGAMLPVDGELEPTDGSVETMVRRYFAGDRKAYNRQVPVNAIAATGTAGQALFAGAGKGDRKSVANMRTIAA AARAAGMETTELVVPGADHDWHAVQAVWNPGLDWFGARTGLGEMTKSLEEYPQVEVLQ
Sequences:
>Translated_458_residues MEDSVWKTVMGLSLVRGIVPRTLFGLTVVAAIILIGILAFGGRRHRTHPLVASLVAATLAGAGGLLATWLMSDVFMVFGV SLGWPVTLTVAGGFAGLGFVLAAAVTLRGARRALAVVLVPLVLASTALGVDSIYGEYRTIGNLVGYTPYPPLGSVTVRKA SMSVGEWRDKARKDALPSMPDSGRVFAVDIPNTESKFKARKAMVYLPPAALSDRPPALPVMELLAGQPGSPGRLIDAGNI AATMNAYAAEHDGLAPIVLAPDQNGSAMHNSLCADTTRGNAETYLTKDVVNWATTTLPVAKSARMWAMGGFSQGGTCTTQ LVPRHPDIYGAMLPVDGELEPTDGSVETMVRRYFAGDRKAYNRQVPVNAIAATGTAGQALFAGAGKGDRKSVANMRTIAA AARAAGMETTELVVPGADHDWHAVQAVWNPGLDWFGARTGLGEMTKSLEEYPQVEVLQ >Mature_458_residues MEDSVWKTVMGLSLVRGIVPRTLFGLTVVAAIILIGILAFGGRRHRTHPLVASLVAATLAGAGGLLATWLMSDVFMVFGV SLGWPVTLTVAGGFAGLGFVLAAAVTLRGARRALAVVLVPLVLASTALGVDSIYGEYRTIGNLVGYTPYPPLGSVTVRKA SMSVGEWRDKARKDALPSMPDSGRVFAVDIPNTESKFKARKAMVYLPPAALSDRPPALPVMELLAGQPGSPGRLIDAGNI AATMNAYAAEHDGLAPIVLAPDQNGSAMHNSLCADTTRGNAETYLTKDVVNWATTTLPVAKSARMWAMGGFSQGGTCTTQ LVPRHPDIYGAMLPVDGELEPTDGSVETMVRRYFAGDRKAYNRQVPVNAIAATGTAGQALFAGAGKGDRKSVANMRTIAA AARAAGMETTELVVPGADHDWHAVQAVWNPGLDWFGARTGLGEMTKSLEEYPQVEVLQ
Specific function: Unknown
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: NA
Molecular weight: Translated: 48166; Mature: 48166
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDSVWKTVMGLSLVRGIVPRTLFGLTVVAAIILIGILAFGGRRHRTHPLVASLVAATLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH GAGGLLATWLMSDVFMVFGVSLGWPVTLTVAGGFAGLGFVLAAAVTLRGARRALAVVLVP CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH LVLASTALGVDSIYGEYRTIGNLVGYTPYPPLGSVTVRKASMSVGEWRDKARKDALPSMP HHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCCCC DSGRVFAVDIPNTESKFKARKAMVYLPPAALSDRPPALPVMELLAGQPGSPGRLIDAGNI CCCCEEEEECCCCHHHHHHHHEEEEECCHHCCCCCCCCHHHHHHCCCCCCCCCEEECCCH AATMNAYAAEHDGLAPIVLAPDQNGSAMHNSLCADTTRGNAETYLTKDVVNWATTTLPVA HHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHH KSARMWAMGGFSQGGTCTTQLVPRHPDIYGAMLPVDGELEPTDGSVETMVRRYFAGDRKA CCCCEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHH YNRQVPVNAIAATGTAGQALFAGAGKGDRKSVANMRTIAAAARAAGMETTELVVPGADHD CCCCCCCHHEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC WHAVQAVWNPGLDWFGARTGLGEMTKSLEEYPQVEVLQ HHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCCCEECC >Mature Secondary Structure MEDSVWKTVMGLSLVRGIVPRTLFGLTVVAAIILIGILAFGGRRHRTHPLVASLVAATLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH GAGGLLATWLMSDVFMVFGVSLGWPVTLTVAGGFAGLGFVLAAAVTLRGARRALAVVLVP CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH LVLASTALGVDSIYGEYRTIGNLVGYTPYPPLGSVTVRKASMSVGEWRDKARKDALPSMP HHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCCCC DSGRVFAVDIPNTESKFKARKAMVYLPPAALSDRPPALPVMELLAGQPGSPGRLIDAGNI CCCCEEEEECCCCHHHHHHHHEEEEECCHHCCCCCCCCHHHHHHCCCCCCCCCEEECCCH AATMNAYAAEHDGLAPIVLAPDQNGSAMHNSLCADTTRGNAETYLTKDVVNWATTTLPVA HHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHH KSARMWAMGGFSQGGTCTTQLVPRHPDIYGAMLPVDGELEPTDGSVETMVRRYFAGDRKA CCCCEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHH YNRQVPVNAIAATGTAGQALFAGAGKGDRKSVANMRTIAAAARAAGMETTELVVPGADHD CCCCCCCHHEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC WHAVQAVWNPGLDWFGARTGLGEMTKSLEEYPQVEVLQ HHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1667221; 12948626 [H]