| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yjjP [C]
Identifier: 213690982
GI number: 213690982
Start: 69506
End: 71386
Strand: Direct
Name: yjjP [C]
Synonym: Blon_0060
Alternate gene names: 213690982
Gene position: 69506-71386 (Clockwise)
Preceding gene: 213690979
Following gene: 213690983
Centisome position: 2.45
GC content: 61.72
Gene sequence:
>1881_bases ATGAGGGATGTGAGCGAACAGAAGAAAAAAAGTGCGCCCGAAGCGAAAGGCGCAACGGCTGTACGTAAATTCCACACCCA CTCCATTCCGCTGGACATGGAAGATATTGCGCGCGATTGGGAAAAACCGGTGGTGGACGCCGGTATCGCCGCCAAAGCCA GCGTGATTGTACGGGTCGGCATGCTGGACCTGGGAGCCGGCACCGGCTCCTTCCGCGTGCGTGAAATGATGCACCGCATC GCCTACCCGCTGGGCGTGCACGTACGCGCCGACGTGAACCTGACGGATATCGAGGCCACCTGCACGGATGGTCGTAACCG CATCACCGAAGTCGTGGATTTGCCGACCACCGGCGTGAACACCGAACGTATCTGGCTGCTGGAACATTTCGCCGACTGGT TCTCCGTGAATCTCGGCAAGGGGTCGATGTATCACGTCGATTCGCAACTGTCCGATGGCGTGGTCAAGCATTTGGACGAA CGTGACGCTTCGCAGTATTCTGCTGATCTGGCCAAGCGCCTGCGCGAACGTGCCAAGGCCGAGGCTGAGGCGGCCAACGG CAGCGTGGACGAGGCGCTGGATCTTGCGTTGAAAACCAAGGTACTCGTGACCTCCGTGGCCAAGTCCTTGGATGATGACA ATGAAGAAGCCCACCGACTTTTGGCGGACAGCGCGGAAGTCACTCCGGTCGAAGACAAAGCGGCCGAAGAGAAGGCCTTC GACGATGCCGAAGTGTTTACCGGTGACTCCAATGAGTCGGTTGAATCGGCGAACGCGGCGAACGGCGCAACCGCCGAAAG CCCTGCTGCAAGCAGTACGAAGCGCAAGAATCGCGTGCCCAAGGAATACGCCGAACACTTCAACGAGCGCTCCGACGAAG AGAAGGCCAAGGGCGGTATCACCGTGCGGCAGGCGCACGAGCGGCTCGATCTGATTGAGCGTCGCAAGCCGCTGTACAAG CCGTGGTTCTCCGGTCTGGCTTCCGCCTTGGCCTGCGCGGCCTTCGTGTTCCTGCTCGGCGGCGGCCCATACGACATGAT CGGTGCGTTCGTGGGCGCGGGCCTTGGCCAGTGGATGCGTCGCCGGCTGTTTGCATACCATCTGAACCAGTTCTTCGTCA CCTTTGTGTGCGTGGCCGCGGCGGCGCTCGCCTGCACCGGCACCTTGCGACTCATCGGCATTTTCGACCCAGTCGCGCTC TCGCACGATACGGCCTACATCGGCGCCATGCTGTTCGTGATCCCCGGTTTCCCGCTCATCACCGGCGGACTCGACATGGC GAAAATCGACTTCCCTTCGGGCATCCAGCGCGTGGCGTACGTGCTGTGCATCATCCTGATGGCCACGCTGGCAGGCTGGG CCGTGGCCGTGATGGTGCACCTGCACCCGGAAGGCTTTGAGCCACTGGGGCTTGACCCGTGGGTCAACGGATTGCTGCGG TTCGTGGCGGCGTTCGTCGGCGTGTGGGGCTTCTCCGTGCTGTTCAATTCGCCGCAGCGCATGTGCCTGACCGCCGCCCT AATCGGTGCGATCACGGACACGCTGCGCTTGGAATTGCAGGACTTCAACGTGGCACCTGAGATGGCTACCTTCATCGGCG CGTTTCTGGCGGGCATTCTGGCATCGGCGTGGCGTTCATCCGTGCGACGTGGCTGGCTACCGCCGCACCTCGGCTACCCG CGCATCTGCCTGACCGTGCCGTCGATCGTGATCATGGTGCCCGGTCTGTATATGTATCGTGCCATGTGGTACCTCGGCAG CTTCCAGACCATGAATGCGCTGGACTGGGCGTTCCGTGCGTTCATGGTGATCATCTGTCTGCCGATCGGCTTGGCGATGG CCCGCGTGGTGACCGACAAGTCCTGGCGCTACGACATCTGA
Upstream 100 bases:
>100_bases ACCTATAGAGACCGAATATCGGACAGCATATGAGACACTGTCCGATTCGCGGAAGATTTGAGCACCTTACGATTGCTGGC GGGGGAGGCAGGGAGTAGTA
Downstream 100 bases:
>100_bases CCGTCATCTTGGCTCCCCTCAGGTGAGGGGAGCTCGGATAAAACAGCGTCTCAGTATGGAAGCGGTGGAAGGTGCTTGAG CCCTTGTATCCACTACCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 626; Mature: 626
Protein sequence:
>626_residues MRDVSEQKKKSAPEAKGATAVRKFHTHSIPLDMEDIARDWEKPVVDAGIAAKASVIVRVGMLDLGAGTGSFRVREMMHRI AYPLGVHVRADVNLTDIEATCTDGRNRITEVVDLPTTGVNTERIWLLEHFADWFSVNLGKGSMYHVDSQLSDGVVKHLDE RDASQYSADLAKRLRERAKAEAEAANGSVDEALDLALKTKVLVTSVAKSLDDDNEEAHRLLADSAEVTPVEDKAAEEKAF DDAEVFTGDSNESVESANAANGATAESPAASSTKRKNRVPKEYAEHFNERSDEEKAKGGITVRQAHERLDLIERRKPLYK PWFSGLASALACAAFVFLLGGGPYDMIGAFVGAGLGQWMRRRLFAYHLNQFFVTFVCVAAAALACTGTLRLIGIFDPVAL SHDTAYIGAMLFVIPGFPLITGGLDMAKIDFPSGIQRVAYVLCIILMATLAGWAVAVMVHLHPEGFEPLGLDPWVNGLLR FVAAFVGVWGFSVLFNSPQRMCLTAALIGAITDTLRLELQDFNVAPEMATFIGAFLAGILASAWRSSVRRGWLPPHLGYP RICLTVPSIVIMVPGLYMYRAMWYLGSFQTMNALDWAFRAFMVIICLPIGLAMARVVTDKSWRYDI
Sequences:
>Translated_626_residues MRDVSEQKKKSAPEAKGATAVRKFHTHSIPLDMEDIARDWEKPVVDAGIAAKASVIVRVGMLDLGAGTGSFRVREMMHRI AYPLGVHVRADVNLTDIEATCTDGRNRITEVVDLPTTGVNTERIWLLEHFADWFSVNLGKGSMYHVDSQLSDGVVKHLDE RDASQYSADLAKRLRERAKAEAEAANGSVDEALDLALKTKVLVTSVAKSLDDDNEEAHRLLADSAEVTPVEDKAAEEKAF DDAEVFTGDSNESVESANAANGATAESPAASSTKRKNRVPKEYAEHFNERSDEEKAKGGITVRQAHERLDLIERRKPLYK PWFSGLASALACAAFVFLLGGGPYDMIGAFVGAGLGQWMRRRLFAYHLNQFFVTFVCVAAAALACTGTLRLIGIFDPVAL SHDTAYIGAMLFVIPGFPLITGGLDMAKIDFPSGIQRVAYVLCIILMATLAGWAVAVMVHLHPEGFEPLGLDPWVNGLLR FVAAFVGVWGFSVLFNSPQRMCLTAALIGAITDTLRLELQDFNVAPEMATFIGAFLAGILASAWRSSVRRGWLPPHLGYP RICLTVPSIVIMVPGLYMYRAMWYLGSFQTMNALDWAFRAFMVIICLPIGLAMARVVTDKSWRYDI >Mature_626_residues MRDVSEQKKKSAPEAKGATAVRKFHTHSIPLDMEDIARDWEKPVVDAGIAAKASVIVRVGMLDLGAGTGSFRVREMMHRI AYPLGVHVRADVNLTDIEATCTDGRNRITEVVDLPTTGVNTERIWLLEHFADWFSVNLGKGSMYHVDSQLSDGVVKHLDE RDASQYSADLAKRLRERAKAEAEAANGSVDEALDLALKTKVLVTSVAKSLDDDNEEAHRLLADSAEVTPVEDKAAEEKAF DDAEVFTGDSNESVESANAANGATAESPAASSTKRKNRVPKEYAEHFNERSDEEKAKGGITVRQAHERLDLIERRKPLYK PWFSGLASALACAAFVFLLGGGPYDMIGAFVGAGLGQWMRRRLFAYHLNQFFVTFVCVAAAALACTGTLRLIGIFDPVAL SHDTAYIGAMLFVIPGFPLITGGLDMAKIDFPSGIQRVAYVLCIILMATLAGWAVAVMVHLHPEGFEPLGLDPWVNGLLR FVAAFVGVWGFSVLFNSPQRMCLTAALIGAITDTLRLELQDFNVAPEMATFIGAFLAGILASAWRSSVRRGWLPPHLGYP RICLTVPSIVIMVPGLYMYRAMWYLGSFQTMNALDWAFRAFMVIICLPIGLAMARVVTDKSWRYDI
Specific function: Unknown
COG id: COG2966
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68621; Mature: 68621
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDVSEQKKKSAPEAKGATAVRKFHTHSIPLDMEDIARDWEKPVVDAGIAAKASVIVRVG CCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCHHHHCCCHHHHHHHHEEC MLDLGAGTGSFRVREMMHRIAYPLGVHVRADVNLTDIEATCTDGRNRITEVVDLPTTGVN HHEECCCCCHHHHHHHHHHHCCCCCCEEEECCCEEECEEECCCCHHHHHHHHCCCCCCCC TERIWLLEHFADWFSVNLGKGSMYHVDSQLSDGVVKHLDERDASQYSADLAKRLRERAKA CHHHHHHHHHHHHHEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAEAANGSVDEALDLALKTKVLVTSVAKSLDDDNEEAHRLLADSAEVTPVEDKAAEEKAF HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCC DDAEVFTGDSNESVESANAANGATAESPAASSTKRKNRVPKEYAEHFNERSDEEKAKGGI CCCHHEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCHHHHHCCC TVRQAHERLDLIERRKPLYKPWFSGLASALACAAFVFLLGGGPYDMIGAFVGAGLGQWMR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH RRLFAYHLNQFFVTFVCVAAAALACTGTLRLIGIFDPVALSHDTAYIGAMLFVIPGFPLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHCCCHHHHHHHHHHHCCCHHE TGGLDMAKIDFPSGIQRVAYVLCIILMATLAGWAVAVMVHLHPEGFEPLGLDPWVNGLLR ECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHH FVAAFVGVWGFSVLFNSPQRMCLTAALIGAITDTLRLELQDFNVAPEMATFIGAFLAGIL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEHHCCCCCHHHHHHHHHHHHHHH ASAWRSSVRRGWLPPHLGYPRICLTVPSIVIMVPGLYMYRAMWYLGSFQTMNALDWAFRA HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHH FMVIICLPIGLAMARVVTDKSWRYDI HHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRDVSEQKKKSAPEAKGATAVRKFHTHSIPLDMEDIARDWEKPVVDAGIAAKASVIVRVG CCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCHHHHCCCHHHHHHHHEEC MLDLGAGTGSFRVREMMHRIAYPLGVHVRADVNLTDIEATCTDGRNRITEVVDLPTTGVN HHEECCCCCHHHHHHHHHHHCCCCCCEEEECCCEEECEEECCCCHHHHHHHHCCCCCCCC TERIWLLEHFADWFSVNLGKGSMYHVDSQLSDGVVKHLDERDASQYSADLAKRLRERAKA CHHHHHHHHHHHHHEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAEAANGSVDEALDLALKTKVLVTSVAKSLDDDNEEAHRLLADSAEVTPVEDKAAEEKAF HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCC DDAEVFTGDSNESVESANAANGATAESPAASSTKRKNRVPKEYAEHFNERSDEEKAKGGI CCCHHEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCHHHHHCCC TVRQAHERLDLIERRKPLYKPWFSGLASALACAAFVFLLGGGPYDMIGAFVGAGLGQWMR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH RRLFAYHLNQFFVTFVCVAAAALACTGTLRLIGIFDPVALSHDTAYIGAMLFVIPGFPLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHCCCHHHHHHHHHHHCCCHHE TGGLDMAKIDFPSGIQRVAYVLCIILMATLAGWAVAVMVHLHPEGFEPLGLDPWVNGLLR ECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHH FVAAFVGVWGFSVLFNSPQRMCLTAALIGAITDTLRLELQDFNVAPEMATFIGAFLAGIL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEHHCCCCCHHHHHHHHHHHHHHH ASAWRSSVRRGWLPPHLGYPRICLTVPSIVIMVPGLYMYRAMWYLGSFQTMNALDWAFRA HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHH FMVIICLPIGLAMARVVTDKSWRYDI HHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA