| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is opuE [H]
Identifier: 213690983
GI number: 213690983
Start: 71599
End: 73260
Strand: Direct
Name: opuE [H]
Synonym: Blon_0061
Alternate gene names: 213690983
Gene position: 71599-73260 (Clockwise)
Preceding gene: 213690982
Following gene: 213690985
Centisome position: 2.53
GC content: 63.18
Gene sequence:
>1662_bases ATGATTGAGGAGGGGTCGCAGTTGGCCAACGATTTCTGGATTCTGCTGGCCATGGTCATCTATTTTGCGGCCATGCTGTC CATCGGATTCATCTACTCCAAACGCTCCAACTCCTCCTCCAAGGAATACTTCGCGGGCGGGCGCGGCGTGGGGCCGTGGC TCACGGCCCTGAGCGCCGAAGCCTCCGACATGAGCGGCTGGCTGCTGATGGGCCTGCCGGGCCTGGCCTACTTCACCGGC GCGGCCGACCCGATGTGGACCGCCATCGGCCTGGCGCTCGGCACCTATCTCAACTGGAAGCTTGTGGCCCGGCGACTGCG CCGCTACTCGGTAGTGGCCGGCGATGCCATCACCATTCCTGACTTCTTCGCCAAGCGTTTCCATGACAAGAAGGGCGTGG TCTCCACCATCGCGGCCGTGATCATCCTGGTGTTCTTCAGCGTGTACGTGGGCAGCTGCTTCGTGACCGTGGGCAAGCTG TTCGCCACGTTGTTCGGTTTCGACTACCACGTCATGATGATCATCGGCGCGGTGGTCGTGTTCGTCTACACCGTGGTGGG CGGCTACTTGTCCGTGGTGATGACCGACTTCATTCAAGGCATGCTCATGTTCTTCGCGCTCGCGGTGGTGTTCATCGGCA CCGTGGCCAGCGCGGGCGGCATCGACAACACCGTGGAATTCCTGCGTGCCATCCCCGGCTACCTGTCCGGCACGCAGGTG GCCGCGCCCAAGCTGGACCCGGCCACCGGCCAGCAGCTCGTCGAGGCGGGCAAGGCCGTGTTCGGCGCGCCCTCCGACTA CGGCATCATCACCATCATCTCCATGCTGGCGTGGGGCCTGGGTTACTTCGGTATGCCGCAGGTGCTGGTGCGCTTCCTGT CCATCCGCAGCGTGGAAGAAGTGCGCAAGTCCCGAATCATCGCCACCTCCTGGTGCGTGATTTCGCTGGGTTGCGCGGTG TGCATCGGCTTGGTGGGGCGCGCGATGATGCCCACCGAACTGCTGACCTCCACCGATGCGGAAACCATTTTCATCGTGCT GGCGCAGACCCTGCTGCCGAGCTTCATGTGCGGCGTGGTGGTCTCCGGCATTTTCGCGGCCTCGATGAGCTCCAGCTCCT CGTATCTGATCATCGGCGCTTCGGCCATGGGCGAGAACATCTTCCGCGGGCTGCTGCACCGCAAGGCCACCGACAAGCAG GTCATGATCGTGGCCAGGGTCACGCTGGTGGTCATGTTCCTGTTCGGTATTCTGGTGGCATACGACCAGAACTCGTCGAT CTTCCAGGTGGTGTCTTACGCGTGGGCCGGGCTTGGCGCCTCATTCGGCCCGTTGATGCTGTGCTCGCTATACTGGCGTC GCGCCAACAAGGCCGGCGCCGTGGCCGGCATGCTGTCCGGCACGGCGGCCGTGCTGATCTGGCACAACCTCGTCAAGCCC TTGGGCGGCGTATTCGCCATCTATGAGCTGCTGCCGGCGTTCATCATTTCGCTGCTGTTCATCGTGGTGGTTTCGTTGCT GACCGCCAAGCCGAACGAGCGTATGCTCTACGAGTTCGACCACTACATGGACGATCCGCTGCCCGGCACCCTGCCGTCCG GCACCGTGCTCGTCGACGAGCCCATGGAAGCCATGGAGTCCGAGGTCCGCAGCGGCAAATGA
Upstream 100 bases:
>100_bases TTGCGGCCGTATTCACGGCTGTGACGGTCTGTATGACGCCGCTCCGGCGTCAATCGCATATCAGCACATAGTTCTGCCAT GGCGGTAGCCGCTTGGCGTC
Downstream 100 bases:
>100_bases CACGTGCCTGCTGTGCGGTCGGCTCGTATGGCAGAGGAGTGGCTTTTTTGTGGTTCGGCAGGAACCATTGAGGCCAAAAC GGACTTCGAGGGGCTGATTT
Product: SSS sodium solute transporter superfamily
Products: NA
Alternate protein names: Sodium/proline symporter [H]
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MIEEGSQLANDFWILLAMVIYFAAMLSIGFIYSKRSNSSSKEYFAGGRGVGPWLTALSAEASDMSGWLLMGLPGLAYFTG AADPMWTAIGLALGTYLNWKLVARRLRRYSVVAGDAITIPDFFAKRFHDKKGVVSTIAAVIILVFFSVYVGSCFVTVGKL FATLFGFDYHVMMIIGAVVVFVYTVVGGYLSVVMTDFIQGMLMFFALAVVFIGTVASAGGIDNTVEFLRAIPGYLSGTQV AAPKLDPATGQQLVEAGKAVFGAPSDYGIITIISMLAWGLGYFGMPQVLVRFLSIRSVEEVRKSRIIATSWCVISLGCAV CIGLVGRAMMPTELLTSTDAETIFIVLAQTLLPSFMCGVVVSGIFAASMSSSSSYLIIGASAMGENIFRGLLHRKATDKQ VMIVARVTLVVMFLFGILVAYDQNSSIFQVVSYAWAGLGASFGPLMLCSLYWRRANKAGAVAGMLSGTAAVLIWHNLVKP LGGVFAIYELLPAFIISLLFIVVVSLLTAKPNERMLYEFDHYMDDPLPGTLPSGTVLVDEPMEAMESEVRSGK
Sequences:
>Translated_553_residues MIEEGSQLANDFWILLAMVIYFAAMLSIGFIYSKRSNSSSKEYFAGGRGVGPWLTALSAEASDMSGWLLMGLPGLAYFTG AADPMWTAIGLALGTYLNWKLVARRLRRYSVVAGDAITIPDFFAKRFHDKKGVVSTIAAVIILVFFSVYVGSCFVTVGKL FATLFGFDYHVMMIIGAVVVFVYTVVGGYLSVVMTDFIQGMLMFFALAVVFIGTVASAGGIDNTVEFLRAIPGYLSGTQV AAPKLDPATGQQLVEAGKAVFGAPSDYGIITIISMLAWGLGYFGMPQVLVRFLSIRSVEEVRKSRIIATSWCVISLGCAV CIGLVGRAMMPTELLTSTDAETIFIVLAQTLLPSFMCGVVVSGIFAASMSSSSSYLIIGASAMGENIFRGLLHRKATDKQ VMIVARVTLVVMFLFGILVAYDQNSSIFQVVSYAWAGLGASFGPLMLCSLYWRRANKAGAVAGMLSGTAAVLIWHNLVKP LGGVFAIYELLPAFIISLLFIVVVSLLTAKPNERMLYEFDHYMDDPLPGTLPSGTVLVDEPMEAMESEVRSGK >Mature_553_residues MIEEGSQLANDFWILLAMVIYFAAMLSIGFIYSKRSNSSSKEYFAGGRGVGPWLTALSAEASDMSGWLLMGLPGLAYFTG AADPMWTAIGLALGTYLNWKLVARRLRRYSVVAGDAITIPDFFAKRFHDKKGVVSTIAAVIILVFFSVYVGSCFVTVGKL FATLFGFDYHVMMIIGAVVVFVYTVVGGYLSVVMTDFIQGMLMFFALAVVFIGTVASAGGIDNTVEFLRAIPGYLSGTQV AAPKLDPATGQQLVEAGKAVFGAPSDYGIITIISMLAWGLGYFGMPQVLVRFLSIRSVEEVRKSRIIATSWCVISLGCAV CIGLVGRAMMPTELLTSTDAETIFIVLAQTLLPSFMCGVVVSGIFAASMSSSSSYLIIGASAMGENIFRGLLHRKATDKQ VMIVARVTLVVMFLFGILVAYDQNSSIFQVVSYAWAGLGASFGPLMLCSLYWRRANKAGAVAGMLSGTAAVLIWHNLVKP LGGVFAIYELLPAFIISLLFIVVVSLLTAKPNERMLYEFDHYMDDPLPGTLPSGTVLVDEPMEAMESEVRSGK
Specific function: Catalyzes the sodium-dependent uptake of extracellular proline [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=513, Percent_Identity=40.7407407407407, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI109659836, Length=551, Percent_Identity=24.6823956442831, Blast_Score=93, Evalue=8e-19, Organism=Homo sapiens, GI14140236, Length=544, Percent_Identity=21.3235294117647, Blast_Score=87, Evalue=6e-17, Organism=Homo sapiens, GI109659839, Length=567, Percent_Identity=23.9858906525573, Blast_Score=87, Evalue=6e-17, Organism=Homo sapiens, GI4507031, Length=546, Percent_Identity=22.8937728937729, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI110835708, Length=575, Percent_Identity=20.8695652173913, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI206597483, Length=387, Percent_Identity=22.9974160206718, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI206597487, Length=387, Percent_Identity=22.9974160206718, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI17941285, Length=481, Percent_Identity=22.6611226611227, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1787251, Length=521, Percent_Identity=37.236084452975, Blast_Score=331, Evalue=8e-92, Organism=Escherichia coli, GI87082237, Length=462, Percent_Identity=25.7575757575758, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1790503, Length=514, Percent_Identity=24.3190661478599, Blast_Score=100, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011851 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 59595; Mature: 59595
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEEGSQLANDFWILLAMVIYFAAMLSIGFIYSKRSNSSSKEYFAGGRGVGPWLTALSAE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHCC ASDMSGWLLMGLPGLAYFTGAADPMWTAIGLALGTYLNWKLVARRLRRYSVVAGDAITIP CCCCCCCHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECH DFFAKRFHDKKGVVSTIAAVIILVFFSVYVGSCFVTVGKLFATLFGFDYHVMMIIGAVVV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH FVYTVVGGYLSVVMTDFIQGMLMFFALAVVFIGTVASAGGIDNTVEFLRAIPGYLSGTQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCC AAPKLDPATGQQLVEAGKAVFGAPSDYGIITIISMLAWGLGYFGMPQVLVRFLSIRSVEE CCCCCCCCHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VRKSRIIATSWCVISLGCAVCIGLVGRAMMPTELLTSTDAETIFIVLAQTLLPSFMCGVV HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VSGIFAASMSSSSSYLIIGASAMGENIFRGLLHRKATDKQVMIVARVTLVVMFLFGILVA HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH YDQNSSIFQVVSYAWAGLGASFGPLMLCSLYWRRANKAGAVAGMLSGTAAVLIWHNLVKP HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LGGVFAIYELLPAFIISLLFIVVVSLLTAKPNERMLYEFDHYMDDPLPGTLPSGTVLVDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCEEECC PMEAMESEVRSGK HHHHHHHHHHCCC >Mature Secondary Structure MIEEGSQLANDFWILLAMVIYFAAMLSIGFIYSKRSNSSSKEYFAGGRGVGPWLTALSAE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHCC ASDMSGWLLMGLPGLAYFTGAADPMWTAIGLALGTYLNWKLVARRLRRYSVVAGDAITIP CCCCCCCHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECH DFFAKRFHDKKGVVSTIAAVIILVFFSVYVGSCFVTVGKLFATLFGFDYHVMMIIGAVVV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH FVYTVVGGYLSVVMTDFIQGMLMFFALAVVFIGTVASAGGIDNTVEFLRAIPGYLSGTQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCC AAPKLDPATGQQLVEAGKAVFGAPSDYGIITIISMLAWGLGYFGMPQVLVRFLSIRSVEE CCCCCCCCHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VRKSRIIATSWCVISLGCAVCIGLVGRAMMPTELLTSTDAETIFIVLAQTLLPSFMCGVV HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VSGIFAASMSSSSSYLIIGASAMGENIFRGLLHRKATDKQVMIVARVTLVVMFLFGILVA HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH YDQNSSIFQVVSYAWAGLGASFGPLMLCSLYWRRANKAGAVAGMLSGTAAVLIWHNLVKP HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LGGVFAIYELLPAFIISLLFIVVVSLLTAKPNERMLYEFDHYMDDPLPGTLPSGTVLVDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCEEECC PMEAMESEVRSGK HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]