| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is lacG [H]
Identifier: 213690969
GI number: 213690969
Start: 50742
End: 51620
Strand: Direct
Name: lacG [H]
Synonym: Blon_0045
Alternate gene names: 213690969
Gene position: 50742-51620 (Clockwise)
Preceding gene: 213690968
Following gene: 213690970
Centisome position: 1.79
GC content: 55.52
Gene sequence:
>879_bases ATGACGCAAACCATGACCGCATCGGCAGCGCGGAAAGCATCCAAGAAAACCCAACATGTGCGCTCGACCGGCGATTGGAT CACCCTCATTGTGCTCATCGCAGCCGCACTGCTCGTGCTTTTCCCGCTGCTCGTACTCACCATCAACGCATTCAAAACGC CTGTCGATTACAATGCCACCGGTCCGCTTTCTCTGCCGAAACACTTCACCATGGATGGCATTATCTCCTTCTGGACCACC ACCAAATTCCCGCTGAAATTCTGGAACAGCCTGGTTATTTCACTGGTAGTGGCAGTGGCCGCCGTCGTGCTTTCCGTGCT GAACTCTTTCGCGCTCGGCATCGGCAGGGTCAAAGGCAACACATGGATTGTGCTCGCCATCATGCTCGCCAATATGATGC CGCAGGAAGCGCTGCTCTACCCGCTGTACACCATGTTCAAGCAGGTCGGACTGTACAACACCAAACTGGCGATCATCATC ATCTTCACCATCATCCAAAGCGCATACGGCACATATCTGCTGTCGTCCGTATACGGTACGTTTCCGCAGGCCATTCTCGA AGCGGCGGCCATCGACGGCGCCTCGCGCTGGCAGATTCTGCGCAAGGTGGTGCTGCCGATTTCCTGGTCGACCATCAGTG TGCTGTTCGTGTTCTTTTTCGTGTGGACATGGAACGAATACATGATTCCGATGGCGTTCCTGATGAGCGATGACGTGCAG ACCATTCCGCTGGCGCTCGCCACCTTGCAGGGGCAGCGCACGATGGATGCGACCACGCTTGCTTCGGCTTCGCTGCTCAG CATTGTGCCGACCATTATCTTCTTCATTATTTTCCAGCGCAAGTTGTCGCAAGGCATCACCGCCGGTGCCGTAAAGTAG
Upstream 100 bases:
>100_bases GCAGAAGCACGTCGAAAAGGAACTGGTCTGAACGGTCCAAACCGTAACAGACCCGCCAAATGTAAGACTCGCAAGACTTC GAAAGCCGAGGAAAACAACC
Downstream 100 bases:
>100_bases CAGAAAAGGGGCGCCGATGACTCAACATAACGATTGGAGCGCTATGCAGCAAAGTTCGTATCATGATATGCAGGTCGATT CGTCGGGTGCGTTCGCCGCG
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MTQTMTASAARKASKKTQHVRSTGDWITLIVLIAAALLVLFPLLVLTINAFKTPVDYNATGPLSLPKHFTMDGIISFWTT TKFPLKFWNSLVISLVVAVAAVVLSVLNSFALGIGRVKGNTWIVLAIMLANMMPQEALLYPLYTMFKQVGLYNTKLAIII IFTIIQSAYGTYLLSSVYGTFPQAILEAAAIDGASRWQILRKVVLPISWSTISVLFVFFFVWTWNEYMIPMAFLMSDDVQ TIPLALATLQGQRTMDATTLASASLLSIVPTIIFFIIFQRKLSQGITAGAVK
Sequences:
>Translated_292_residues MTQTMTASAARKASKKTQHVRSTGDWITLIVLIAAALLVLFPLLVLTINAFKTPVDYNATGPLSLPKHFTMDGIISFWTT TKFPLKFWNSLVISLVVAVAAVVLSVLNSFALGIGRVKGNTWIVLAIMLANMMPQEALLYPLYTMFKQVGLYNTKLAIII IFTIIQSAYGTYLLSSVYGTFPQAILEAAAIDGASRWQILRKVVLPISWSTISVLFVFFFVWTWNEYMIPMAFLMSDDVQ TIPLALATLQGQRTMDATTLASASLLSIVPTIIFFIIFQRKLSQGITAGAVK >Mature_291_residues TQTMTASAARKASKKTQHVRSTGDWITLIVLIAAALLVLFPLLVLTINAFKTPVDYNATGPLSLPKHFTMDGIISFWTTT KFPLKFWNSLVISLVVAVAAVVLSVLNSFALGIGRVKGNTWIVLAIMLANMMPQEALLYPLYTMFKQVGLYNTKLAIIII FTIIQSAYGTYLLSSVYGTFPQAILEAAAIDGASRWQILRKVVLPISWSTISVLFVFFFVWTWNEYMIPMAFLMSDDVQT IPLALATLQGQRTMDATTLASASLLSIVPTIIFFIIFQRKLSQGITAGAVK
Specific function: Part of the binding-protein-dependent transport system for lactose. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787571, Length=258, Percent_Identity=31.0077519379845, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1790464, Length=231, Percent_Identity=30.7359307359307, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1789860, Length=277, Percent_Identity=25.2707581227437, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32201; Mature: 32070
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTMTASAARKASKKTQHVRSTGDWITLIVLIAAALLVLFPLLVLTINAFKTPVDYNAT CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GPLSLPKHFTMDGIISFWTTTKFPLKFWNSLVISLVVAVAAVVLSVLNSFALGIGRVKGN CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TWIVLAIMLANMMPQEALLYPLYTMFKQVGLYNTKLAIIIIFTIIQSAYGTYLLSSVYGT HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FPQAILEAAAIDGASRWQILRKVVLPISWSTISVLFVFFFVWTWNEYMIPMAFLMSDDVQ HHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH TIPLALATLQGQRTMDATTLASASLLSIVPTIIFFIIFQRKLSQGITAGAVK HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TQTMTASAARKASKKTQHVRSTGDWITLIVLIAAALLVLFPLLVLTINAFKTPVDYNAT CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GPLSLPKHFTMDGIISFWTTTKFPLKFWNSLVISLVVAVAAVVLSVLNSFALGIGRVKGN CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TWIVLAIMLANMMPQEALLYPLYTMFKQVGLYNTKLAIIIIFTIIQSAYGTYLLSSVYGT HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FPQAILEAAAIDGASRWQILRKVVLPISWSTISVLFVFFFVWTWNEYMIPMAFLMSDDVQ HHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH TIPLALATLQGQRTMDATTLASASLLSIVPTIIFFIIFQRKLSQGITAGAVK HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1630315 [H]