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The map label for this gene is yurN [H]

Identifier: 213690968

GI number: 213690968

Start: 49767

End: 50672

Strand: Direct

Name: yurN [H]

Synonym: Blon_0044

Alternate gene names: 213690968

Gene position: 49767-50672 (Clockwise)

Preceding gene: 213690967

Following gene: 213690969

Centisome position: 1.76

GC content: 52.21

Gene sequence:

>906_bases
ATGTCAAGGCTTCCCGGAAACCGTTCCGCAAAATTCGTACCATATCTTGTTCCCGGACTGGTAGGTCTGCTCGTTATCGT
CGTTATTCCATTCGCATGGAACATTTATTTGAGTTTCACTCGCTGGCGCGGAGTTGGTCCTGCTAAATTCGTCGGATTGC
AGAATTGGAAACGTCTGTTCGCTGATTCCACGTTCTGGATTTCATTCGCTAATTCATTCTGGATTATTGTGGCTATCGTA
GTTATTCCTACGATTCTCGGACTTTTTATTTCGTCACTGTTGACTGACGTTATTCAGAAGAAATTCGGTGGAAAGACGGC
TTCTTTTCTGCGGGCCATGTTCTACCTGCCGCAGCTGCTGCCAGTTGCGGTCGCGGCCATCATCATGGGCTGGATTTTCC
GCCCGGAAGATGGTGCGGTGAACGCGCTGCTCGTTAAGCTCGGCCTGGGATCACTGCAGCATAATTGGCTCGGTAGTCCT
GATAGCGCGCTTCCGGTACTGATGTTCATCCTGGTGTGGATTCAGCTGGGCTATCCGATAGTGATTTTCATGTCCGGTCT
GCAGCGCGTGGATCCTGAACTTTACGAGGCGGCTGGTCTTGACGGAGCCAACTGGTGGCAGAAATTCCGTGTGGTCACGC
TGCCATCCATTATTCCCGAACTGCTGGTGGTCATCCTTACTGCCACCATCGGTGCGCTGAAAACCTTCGCACCGGTCTAT
CTGCTCACCAAAGGCGGGCCGGGAACGGCAACTACCGTGCCATCGTACTATTCCTACAATCAATTCTTCCAAGTGCAACA
AGTCGGCTACGGCGCGGCCATCTCCACAGCGCTCACCGTGGTCATCATCGTGTTCTCCATCGTGTTCACCATGGTGCAGA
AGCACGTCGAAAAGGAACTGGTCTGA

Upstream 100 bases:

>100_bases
CTTGCGAACCAATATCGCAATCGTCAATATTCACAGGCAACGCAGCGCAACCAAAGGAAAAGCCAAAATGTCAAAGAAGA
CCAAAAACGGGGGAGTCTCA

Downstream 100 bases:

>100_bases
ACGGTCCAAACCGTAACAGACCCGCCAAATGTAAGACTCGCAAGACTTCGAAAGCCGAGGAAAACAACCATGACGCAAAC
CATGACCGCATCGGCAGCGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSRLPGNRSAKFVPYLVPGLVGLLVIVVIPFAWNIYLSFTRWRGVGPAKFVGLQNWKRLFADSTFWISFANSFWIIVAIV
VIPTILGLFISSLLTDVIQKKFGGKTASFLRAMFYLPQLLPVAVAAIIMGWIFRPEDGAVNALLVKLGLGSLQHNWLGSP
DSALPVLMFILVWIQLGYPIVIFMSGLQRVDPELYEAAGLDGANWWQKFRVVTLPSIIPELLVVILTATIGALKTFAPVY
LLTKGGPGTATTVPSYYSYNQFFQVQQVGYGAAISTALTVVIIVFSIVFTMVQKHVEKELV

Sequences:

>Translated_301_residues
MSRLPGNRSAKFVPYLVPGLVGLLVIVVIPFAWNIYLSFTRWRGVGPAKFVGLQNWKRLFADSTFWISFANSFWIIVAIV
VIPTILGLFISSLLTDVIQKKFGGKTASFLRAMFYLPQLLPVAVAAIIMGWIFRPEDGAVNALLVKLGLGSLQHNWLGSP
DSALPVLMFILVWIQLGYPIVIFMSGLQRVDPELYEAAGLDGANWWQKFRVVTLPSIIPELLVVILTATIGALKTFAPVY
LLTKGGPGTATTVPSYYSYNQFFQVQQVGYGAAISTALTVVIIVFSIVFTMVQKHVEKELV
>Mature_300_residues
SRLPGNRSAKFVPYLVPGLVGLLVIVVIPFAWNIYLSFTRWRGVGPAKFVGLQNWKRLFADSTFWISFANSFWIIVAIVV
IPTILGLFISSLLTDVIQKKFGGKTASFLRAMFYLPQLLPVAVAAIIMGWIFRPEDGAVNALLVKLGLGSLQHNWLGSPD
SALPVLMFILVWIQLGYPIVIFMSGLQRVDPELYEAAGLDGANWWQKFRVVTLPSIIPELLVVILTATIGALKTFAPVYL
LTKGGPGTATTVPSYYSYNQFFQVQQVGYGAAISTALTVVIIVFSIVFTMVQKHVEKELV

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=272, Percent_Identity=33.0882352941176, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1789861, Length=306, Percent_Identity=29.0849673202614, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1790465, Length=250, Percent_Identity=26.8, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33244; Mature: 33113

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLPGNRSAKFVPYLVPGLVGLLVIVVIPFAWNIYLSFTRWRGVGPAKFVGLQNWKRLF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCHHHHHHHHHHHHHH
ADSTFWISFANSFWIIVAIVVIPTILGLFISSLLTDVIQKKFGGKTASFLRAMFYLPQLL
CCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
PVAVAAIIMGWIFRPEDGAVNALLVKLGLGSLQHNWLGSPDSALPVLMFILVWIQLGYPI
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCHH
VIFMSGLQRVDPELYEAAGLDGANWWQKFRVVTLPSIIPELLVVILTATIGALKTFAPVY
HHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
LLTKGGPGTATTVPSYYSYNQFFQVQQVGYGAAISTALTVVIIVFSIVFTMVQKHVEKEL
EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
V
C
>Mature Secondary Structure 
SRLPGNRSAKFVPYLVPGLVGLLVIVVIPFAWNIYLSFTRWRGVGPAKFVGLQNWKRLF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCHHHHHHHHHHHHHH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C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]