Click here to switch to the map view.

The map label for this gene is yafQ [C]

Identifier: 213690940

GI number: 213690940

Start: 15155

End: 15445

Strand: Reverse

Name: yafQ [C]

Synonym: Blon_0012

Alternate gene names: 213690940

Gene position: 15445-15155 (Counterclockwise)

Preceding gene: 213690941

Following gene: 213690939

Centisome position: 0.55

GC content: 54.98

Gene sequence:

>291_bases
ATGAGCGGCATCCGGTACACGGTCAAGACCACGTCCAGATTCAGGAAGGACTTCAAACTCGCCAGACGACGCGGACTGGA
CGCCGGCCTTTTCAAACAGGTTGTATCCATTCTGTCCGAGGGCGGCACACTGCCCGACCGGTATCATGACCATGCGCTTA
CAGGCAATATGACCGGCTTCAGGGAGTGCTATATCACACCAGACCTGCTGTTGGTCTATCTCATAGAGAAGGACGTGCTG
GTGCTCACTCTGACCCGAACGGGCACCCATAGTGGCCTTTTCGGAAAATAA

Upstream 100 bases:

>100_bases
GGGAGACCGTCTCCGCCATGTTGGAGGCGAAGCGAATCGCAAGGGACGGGAACGTGAAGGGCTACCGGGACCTGAACGCC
TTGTTCAAGGACTTGGATGC

Downstream 100 bases:

>100_bases
CGGGATACGGACAAAGGAAAGCCGGGACAGGGGCCCGACCAAGGCAGGGTGTGTAGCAAGGCACCCAATGTCGTGATACA
CCGAGAAAACGGCGAAATAG

Product: addiction module toxin, RelE/StbE family

Products: NA

Alternate protein names: Xin-Antitoxin System Toxin Component RelE Family; Addiction Module xin; Addiction Module Antitoxin; RelE Family xin-Antitoxin System Toxin Protein; RelE xin; Addiction Module xin RelE/StbE; DNA Damage Inducible Protein; RelE xin/Antitoxin Addiction Module Toxin Protien; Plasmid Stability Protein; Addiction Module xin Rele/Stbe Family

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MSGIRYTVKTTSRFRKDFKLARRRGLDAGLFKQVVSILSEGGTLPDRYHDHALTGNMTGFRECYITPDLLLVYLIEKDVL
VLTLTRTGTHSGLFGK

Sequences:

>Translated_96_residues
MSGIRYTVKTTSRFRKDFKLARRRGLDAGLFKQVVSILSEGGTLPDRYHDHALTGNMTGFRECYITPDLLLVYLIEKDVL
VLTLTRTGTHSGLFGK
>Mature_95_residues
SGIRYTVKTTSRFRKDFKLARRRGLDAGLFKQVVSILSEGGTLPDRYHDHALTGNMTGFRECYITPDLLLVYLIEKDVLV
LTLTRTGTHSGLFGK

Specific function: Unknown

COG id: COG3041

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786419, Length=94, Percent_Identity=36.1702127659575, Blast_Score=64, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10836; Mature: 10705

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGIRYTVKTTSRFRKDFKLARRRGLDAGLFKQVVSILSEGGTLPDRYHDHALTGNMTGF
CCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
RECYITPDLLLVYLIEKDVLVLTLTRTGTHSGLFGK
HHEEECHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
SGIRYTVKTTSRFRKDFKLARRRGLDAGLFKQVVSILSEGGTLPDRYHDHALTGNMTGF
CCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
RECYITPDLLLVYLIEKDVLVLTLTRTGTHSGLFGK
HHEEECHHHHHHHHHCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA